RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 RFC2P35250 354 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CPT1AP50416 773 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 KCNQ1P51787 676 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PURAQ00577 322 aaKnown RBP9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PWP2Q15269 919 aaKnown RBP9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 BRDTQ58F21 947 aaPredicted RBP9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MUM1L1Q5H9M0 696 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 KCTD1Q719H9 257 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 RETREG2Q8NC44 543 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MORC4Q8TE76 937 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CHMP4CQ96CF2 233 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 VWCEQ96DN2 955 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 SLC9A7Q96T83 725 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 WDR11Q9BZH6 1224 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 NAPBQ9H115 298 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TRMT13Q9NUP7 481 aaKnown RBP9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CCPG1Q9ULG6 757 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PRR12Q9ULL5 1215 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 STX8Q9UNK0 236 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PLIN4Q96Q06 1357 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 SCN5AQ14524 2016 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 M0R2C6 588 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 RFXAPO00287 272 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 KPNA6O60684 536 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 ICAM1P05362 532 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MYL3P08590 195 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 SNAP25P60880 206 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PPARAQ07869 468 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 FAM47CQ5HY64 1035 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TMEM63BQ5T3F8 832 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 HLA-CQ95604 372 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MTG1Q9BT17 334 aaPredicted RBP9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 FTOQ9C0B1 505 aaKnown RBP eCLIP9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CERS4Q9HA82 394 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 HCN4Q9Y3Q4 1203 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 DDX49Q9Y6V7 483 aaKnown RBP9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 RAD50Q92878 1312 aa9.31□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TRIP12Q14669 1992 aaPredicted RBP9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 RBM47A0AV96 593 aaKnown RBP9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TSPY2A6NKD2 308 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 NKRFO15226 690 aaKnown RBP eCLIP9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TLL1O43897 1013 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 IQCF3P0C7M6 154 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TAP1Q03518 808 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PTPN11Q06124 597 aaPredicted RBP9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 BFSP2Q13515 415 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 BAATQ14032 418 aaPredicted RBP9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 NBPF20Q3BBV1 942 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TMEM31Q5JXX7 168 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 NFRKBQ6P4R8 1299 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 HERC6Q8IVU3 1022 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 ARNTL2Q8WYA1 636 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PURBQ96QR8 312 aaKnown RBP9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MPHOSPH6Q99547 160 aaKnown RBP9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 LRFN3Q9BTN0 628 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 EPHX3Q9H6B9 360 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CHD7Q9P2D1 2997 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PNMA2Q9UL42 364 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 NOD1Q9Y239 953 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 LRRC37A2A6NM11 1700 aa9.3□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PTPDC1A2A3K4 754 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 B4DLN1 442 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 BAIAP3O94812 1187 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 ALDH5A1P51649 535 aaPredicted RBP9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MRPL12P52815 198 aaKnown RBP9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PDE4DQ08499 809 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CCDC96Q2M329 555 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 OR6J1Q8NGC5 347 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 DCAF4Q8WV16 495 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 DCTPP1Q9H773 170 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 IL17RBQ9NRM6 502 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MTMR7Q9Y216 660 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 SCN10AQ9Y5Y9 1956 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TRANK1O15050 2925 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TET1Q8NFU7 2136 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 LCTP09848 1927 aa9.29□□□□□ -0.92
HLA-DPA1-241ENST00000417724 EPOPA6NHQ4 379 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 A6NJR5 290 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 RANBP6O60518 1105 aaKnown RBP9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 NMT2O60551 498 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 KCNJ6P48051 423 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 GRB10Q13322 594 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PPP2R5BQ15173 497 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 ZMYM1Q5SVZ6 1142 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TSHZ3Q63HK5 1081 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 KRT40Q6A162 431 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 BTNL9Q6UXG8 535 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CCDC155Q8N6L0 562 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 SCFD2Q8WU76 684 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 SEC62Q99442 399 aaKnown RBP9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 RANBP17Q9H2T7 1088 aaKnown RBP9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 LMCD1Q9NZU5 365 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 BRWD1Q9NSI6 2320 aa9.28□□□□□ -0.92
HLA-DPA1-241ENST00000417724 NFIBO00712 420 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GPR37L1O60883 481 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PARNO95453 639 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms