RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
SEC13-206ENST00000397102 GPAA1O43292 621 aa17.79■□□□□ 0.44
SEC13-206ENST00000397102 SLC1A4P43007 532 aa17.79■□□□□ 0.44
SEC13-206ENST00000397102 PURAQ00577 322 aaKnown RBP17.79■□□□□ 0.44
SEC13-206ENST00000397102 TAP1Q03518 808 aa17.79■□□□□ 0.44
SEC13-206ENST00000397102 MUM1L1Q5H9M0 696 aa17.79■□□□□ 0.44
SEC13-206ENST00000397102 KRT40Q6A162 431 aa17.79■□□□□ 0.44
SEC13-206ENST00000397102 KBTBD3Q8NAB2 608 aa17.79■□□□□ 0.44
SEC13-206ENST00000397102 HLA-CQ95604 372 aa17.79■□□□□ 0.44
SEC13-206ENST00000397102 TRANK1O15050 2925 aa17.79■□□□□ 0.44
SEC13-206ENST00000397102 CPT1AP50416 773 aa17.78■□□□□ 0.44
SEC13-206ENST00000397102 PDE4BQ07343 736 aa17.78■□□□□ 0.44
SEC13-206ENST00000397102 ARNTL2Q8WYA1 636 aa17.78■□□□□ 0.44
SEC13-206ENST00000397102 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
SEC13-206ENST00000397102 PTPRSQ13332 1948 aa17.78■□□□□ 0.44
SEC13-206ENST00000397102 KIF28PB7ZC32 967 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 PITPNM1O00562 1244 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 RNF113AO15541 343 aaKnown RBP17.77■□□□□ 0.44
SEC13-206ENST00000397102 GPR37L1O60883 481 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 ARHGEF15O94989 841 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 APPP05067 770 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 ZFYP08048 801 aaPredicted RBP17.77■□□□□ 0.44
SEC13-206ENST00000397102 MCCP23508 829 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 TFAP4Q01664 338 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 NSMFQ6X4W1 530 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 HERC6Q8IVU3 1022 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 IFNL3Q8IZI9 196 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 MTG1Q9BT17 334 aaPredicted RBP17.77■□□□□ 0.44
SEC13-206ENST00000397102 ECHDC1Q9NTX5 307 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 PRR12Q9ULL5 1215 aa17.77■□□□□ 0.44
SEC13-206ENST00000397102 LOC102724159A0A0B4J2E5 919 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
SEC13-206ENST00000397102 MYL3P08590 195 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 IQCF3P0C7M6 154 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 GRB10Q13322 594 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 PWP2Q15269 919 aaKnown RBP17.76■□□□□ 0.43
SEC13-206ENST00000397102 PPP4R3BQ5MIZ7 849 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 RCSD1Q6JBY9 416 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 KCTD1Q719H9 257 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 PURBQ96QR8 312 aaKnown RBP17.76■□□□□ 0.43
SEC13-206ENST00000397102 WDR11Q9BZH6 1224 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
SEC13-206ENST00000397102 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
SEC13-206ENST00000397102 CCPG1Q9ULG6 757 aa17.76■□□□□ 0.43
SEC13-206ENST00000397102 TET1Q8NFU7 2136 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 RBM47A0AV96 593 aaKnown RBP17.75■□□□□ 0.43
SEC13-206ENST00000397102 M0R2C6 588 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 BAIAP3O94812 1187 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 SLC3A2P08195 630 aaKnown RBP17.75■□□□□ 0.43
SEC13-206ENST00000397102 ALDH5A1P51649 535 aaPredicted RBP17.75■□□□□ 0.43
SEC13-206ENST00000397102 SNAP25P60880 206 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
SEC13-206ENST00000397102 NBPF20Q3BBV1 942 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 FAM47CQ5HY64 1035 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 NFRKBQ6P4R8 1299 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 RETREG2Q8NC44 543 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 OR6J1Q8NGC5 347 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 CHMP4CQ96CF2 233 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 NACAP1Q9BZK3 213 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 FTOQ9C0B1 505 aaKnown RBP eCLIP17.75■□□□□ 0.43
SEC13-206ENST00000397102 C11orf16Q9NQ32 467 aa17.75■□□□□ 0.43
SEC13-206ENST00000397102 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
SEC13-206ENST00000397102 LPXNO60711 386 aa17.74■□□□□ 0.43
SEC13-206ENST00000397102 ICAM1P05362 532 aa17.74■□□□□ 0.43
SEC13-206ENST00000397102 PTPN11Q06124 597 aaPredicted RBP17.74■□□□□ 0.43
SEC13-206ENST00000397102 BFSP2Q13515 415 aa17.74■□□□□ 0.43
SEC13-206ENST00000397102 BRDTQ58F21 947 aaPredicted RBP17.74■□□□□ 0.43
SEC13-206ENST00000397102 KHSRPQ92945 711 aaKnown RBP eCLIP17.74■□□□□ 0.43
SEC13-206ENST00000397102 CHMP4BQ9H444 224 aaKnown RBP17.74■□□□□ 0.43
SEC13-206ENST00000397102 LMCD1Q9NZU5 365 aa17.74■□□□□ 0.43
SEC13-206ENST00000397102 RAD50Q92878 1312 aa17.73■□□□□ 0.43
SEC13-206ENST00000397102 TRIP12Q14669 1992 aaPredicted RBP17.73■□□□□ 0.43
SEC13-206ENST00000397102 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
SEC13-206ENST00000397102 KPNA6O60684 536 aa17.73■□□□□ 0.43
SEC13-206ENST00000397102 PPARAQ07869 468 aa17.73■□□□□ 0.43
SEC13-206ENST00000397102 BAATQ14032 418 aaPredicted RBP17.73■□□□□ 0.43
SEC13-206ENST00000397102 STX8Q9UNK0 236 aa17.73■□□□□ 0.43
SEC13-206ENST00000397102 KCNJ6P48051 423 aa17.72■□□□□ 0.43
SEC13-206ENST00000397102 RASGRP2Q7LDG7 609 aa17.72■□□□□ 0.43
SEC13-206ENST00000397102 NAPBQ9H115 298 aa17.72■□□□□ 0.43
SEC13-206ENST00000397102 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
SEC13-206ENST00000397102 FAM86C2PA6NEL3 165 aa17.71■□□□□ 0.43
SEC13-206ENST00000397102 A6NJR5 290 aa17.71■□□□□ 0.43
SEC13-206ENST00000397102 PI4K2BG5E9Z4 385 aa17.71■□□□□ 0.43
SEC13-206ENST00000397102 PPP2R5BQ15173 497 aa17.71■□□□□ 0.43
SEC13-206ENST00000397102 LRRFIP1Q32MZ4 808 aaKnown RBP17.71■□□□□ 0.43
SEC13-206ENST00000397102 SPRED2Q7Z698 418 aa17.71■□□□□ 0.43
SEC13-206ENST00000397102 GPATCH3Q96I76 525 aa17.71■□□□□ 0.43
SEC13-206ENST00000397102 NOD1Q9Y239 953 aa17.71■□□□□ 0.43
SEC13-206ENST00000397102 BRWD1Q9NSI6 2320 aa17.71■□□□□ 0.43
SEC13-206ENST00000397102 SIP14410 1827 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 PTPDC1A2A3K4 754 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 TSPY2A6NKD2 308 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 NFIBO00712 420 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 CCDC155Q8N6L0 562 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 PPP1R13LQ8WUF5 828 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 DCAF4Q8WV16 495 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 CD320Q9NPF0 282 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 IL17RBQ9NRM6 502 aa17.7■□□□□ 0.42
SEC13-206ENST00000397102 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms