RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 FBXO16Q8IX29 292 aaPredicted RBP16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 MRPL38Q96DV4 380 aaKnown RBP16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 NYAP2Q9P242 653 aa16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 MUTYHQ9UIF7 546 aa16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 PLXNA3P51805 1871 aa16.46■□□□□ 0.23
VCPKMT-201ENST00000395859 GVINP1Q7Z2Y8 2422 aa16.46■□□□□ 0.23
VCPKMT-201ENST00000395859 CXCL10P02778 98 aa16.46■□□□□ 0.23
VCPKMT-201ENST00000395859 LTBRP36941 435 aa16.46■□□□□ 0.23
VCPKMT-201ENST00000395859 SLC4A3P48751 1232 aa16.46■□□□□ 0.23
VCPKMT-201ENST00000395859 PRRX2Q99811 253 aa16.46■□□□□ 0.23
VCPKMT-201ENST00000395859 ACAD9Q9H845 621 aa16.46■□□□□ 0.23
VCPKMT-201ENST00000395859 ARMT1Q9H993 441 aa16.46■□□□□ 0.23
VCPKMT-201ENST00000395859 DMXL1Q9Y485 3027 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 IGKV6D-41A0A0C4DH26 115 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 USP17L12C9JPN9 530 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 USP17L21D6R901 530 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 PTPN11Q06124 597 aaPredicted RBP16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 BFSP2Q13515 415 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 RETREG2Q8NC44 543 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 EDAQ92838 391 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 C17orf80Q9BSJ5 609 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 MTG1Q9BT17 334 aaPredicted RBP16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 VTA1Q9NP79 307 aa16.45■□□□□ 0.22
VCPKMT-201ENST00000395859 EPG5Q9HCE0 2579 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 COL4A6Q14031 1691 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 CACNA1BQ00975 2339 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 RBM47A0AV96 593 aaKnown RBP16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 RAD21O60216 631 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 RARSP54136 660 aaKnown RBP16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 RBL2Q08999 1139 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 SMAD2Q15796 467 aaKnown RBP16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 FAM9BQ8IZU0 186 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 SP7Q8TDD2 431 aaPredicted RBP16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 PPP1R13LQ8WUF5 828 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 MKL1Q969V6 931 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 ZBED2Q9BTP6 218 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 FAM50BQ9Y247 325 aa16.44■□□□□ 0.22
VCPKMT-201ENST00000395859 ZFHX4Q86UP3 3567 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 NBNO60934 754 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 TTF1Q15361 905 aaPredicted RBP16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 PKN1Q16512 942 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 CTC1Q2NKJ3 1217 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 CNKSR3Q6P9H4 555 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 EEPD1Q7L9B9 569 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 RNF135Q8IUD6 432 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 FBXO22Q8NEZ5 403 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 HOMER2Q9NSB8 354 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 ZNF292O60281 2723 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 ATG2AQ2TAZ0 1938 aa16.43■□□□□ 0.22
VCPKMT-201ENST00000395859 ABHD14A-ACY1A0A1B0GW23 586 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 RBAK-RBAKDNI3L0D1 243 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 FDX1P10109 184 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 TRIM27P14373 513 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 RASA1P20936 1047 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 CPT1AP50416 773 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 HTRA4P83105 476 aaPredicted RBP16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 SLFNL1Q499Z3 407 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 TIGD5Q53EQ6 642 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 TCEAL5Q5H9L2 206 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 TRIM67Q6ZTA4 783 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 CAGE1Q8TC20 777 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 DHX38Q92620 1227 aaKnown RBP16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 CTNNA3Q9UI47 895 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
VCPKMT-201ENST00000395859 TMEM221A6NGB7 291 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 A6NJR5 290 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 PROB1E7EW31 1015 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 M0R296 226 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 BCAR3O75815 825 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 MBD4O95243 580 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 MYL3P08590 195 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 TRAF7Q6Q0C0 670 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 ERMP1Q7Z2K6 904 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 PURBQ96QR8 312 aaKnown RBP16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 CYP39A1Q9NYL5 469 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 SYNPO2Q9UMS6 1093 aa16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 KMT2BQ9UMN6 2715 aaPredicted RBP16.41■□□□□ 0.22
VCPKMT-201ENST00000395859 MICAL3Q7RTP6 2002 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 H3BNC9 293 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 SELPP16109 830 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 PTPROQ16827 1216 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 EPC2Q52LR7 807 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 FAM47CQ5HY64 1035 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 SESTD1Q86VW0 696 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms