RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 MORC4Q8TE76 937 aa18.87■□□□□ 0.61
VCX3A-201ENST00000381089 RANBP17Q9H2T7 1088 aaKnown RBP18.87■□□□□ 0.61
VCX3A-201ENST00000381089 ANAPC4Q9UJX5 808 aa18.87■□□□□ 0.61
VCX3A-201ENST00000381089 PCDHA11Q9Y5I1 949 aa18.87■□□□□ 0.61
VCX3A-201ENST00000381089 PTPDC1A2A3K4 754 aa18.86■□□□□ 0.61
VCX3A-201ENST00000381089 ALDH5A1P51649 535 aaPredicted RBP18.86■□□□□ 0.61
VCX3A-201ENST00000381089 BAATQ14032 418 aaPredicted RBP18.86■□□□□ 0.61
VCX3A-201ENST00000381089 SYDE2Q5VT97 1194 aa18.86■□□□□ 0.61
VCX3A-201ENST00000381089 WDR11Q9BZH6 1224 aa18.86■□□□□ 0.61
VCX3A-201ENST00000381089 WNT8AQ9H1J5 351 aa18.86■□□□□ 0.61
VCX3A-201ENST00000381089 YBX2Q9Y2T7 364 aaKnown RBP18.86■□□□□ 0.61
VCX3A-201ENST00000381089 MUC3AQ02505 3323 aa18.86■□□□□ 0.61
VCX3A-201ENST00000381089 CHD9Q3L8U1 2897 aa18.85■□□□□ 0.61
VCX3A-201ENST00000381089 TNKSO95271 1327 aa18.85■□□□□ 0.61
VCX3A-201ENST00000381089 B4DLN1 442 aa18.85■□□□□ 0.61
VCX3A-201ENST00000381089 ORC4O43929 436 aa18.85■□□□□ 0.61
VCX3A-201ENST00000381089 MYL3P08590 195 aa18.85■□□□□ 0.61
VCX3A-201ENST00000381089 TOP1P11387 765 aaKnown RBP18.85■□□□□ 0.61
VCX3A-201ENST00000381089 ACTN1P12814 892 aa18.85■□□□□ 0.61
VCX3A-201ENST00000381089 ATP2A2P16615 1042 aaKnown RBP18.85■□□□□ 0.61
VCX3A-201ENST00000381089 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
VCX3A-201ENST00000381089 ADGRE1Q14246 886 aa18.85■□□□□ 0.61
VCX3A-201ENST00000381089 BTNL9Q6UXG8 535 aa18.85■□□□□ 0.61
VCX3A-201ENST00000381089 MTG1Q9BT17 334 aaPredicted RBP18.85■□□□□ 0.61
VCX3A-201ENST00000381089 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
VCX3A-201ENST00000381089 GBF1Q92538 1859 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 NKRFO15226 690 aaKnown RBP eCLIP18.84■□□□□ 0.61
VCX3A-201ENST00000381089 PTGS1P23219 599 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 SLC16A2P36021 539 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 NOVP48745 357 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 PDE4DQ08499 809 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 RRP12Q5JTH9 1297 aaKnown RBP18.84■□□□□ 0.61
VCX3A-201ENST00000381089 OR6J1Q8NGC5 347 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 ADAMTS19Q8TE59 1207 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 SCLYQ96I15 445 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 INCENPQ9NQS7 918 aa18.84■□□□□ 0.61
VCX3A-201ENST00000381089 KPNA6O60684 536 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 CALML3P27482 149 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 RFC2P35250 354 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 RABGGTBP53611 331 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 PURAQ00577 322 aaKnown RBP18.83■□□□□ 0.6
VCX3A-201ENST00000381089 PPP2R5BQ15173 497 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 ALX1Q15699 326 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 FAM47CQ5HY64 1035 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 RNF207Q6ZRF8 634 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 RASGRP2Q7LDG7 609 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 OTUD7AQ8TE49 926 aaPredicted RBP18.83■□□□□ 0.6
VCX3A-201ENST00000381089 PURBQ96QR8 312 aaKnown RBP18.83■□□□□ 0.6
VCX3A-201ENST00000381089 UHRF1Q96T88 793 aaPredicted RBP18.83■□□□□ 0.6
VCX3A-201ENST00000381089 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.6
VCX3A-201ENST00000381089 TRMT13Q9NUP7 481 aaKnown RBP18.83■□□□□ 0.6
VCX3A-201ENST00000381089 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
VCX3A-201ENST00000381089 NFIBO00712 420 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 FOXP2O15409 715 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 AAK1Q2M2I8 961 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 TMEM67Q5HYA8 995 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 TMEM63BQ5T3F8 832 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 TTBK2Q6IQ55 1244 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 DEFB128Q7Z7B8 93 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 MICALL1Q8N3F8 863 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 RETREG2Q8NC44 543 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 SCFD2Q8WU76 684 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 TMEM47Q9BQJ4 181 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 GPCPD1Q9NPB8 672 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 TCP11L1Q9NUJ3 509 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 LCTP09848 1927 aa18.82■□□□□ 0.6
VCX3A-201ENST00000381089 FRMPD2Q68DX3 1309 aaPredicted RBP18.81■□□□□ 0.6
VCX3A-201ENST00000381089 GTPBP6O43824 516 aaPredicted RBP18.81■□□□□ 0.6
VCX3A-201ENST00000381089 FGRP09769 529 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 CYP2C9P11712 490 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 COL9A1P20849 921 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 VPS53Q5VIR6 699 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 NFRKBQ6P4R8 1299 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 DNERQ8NFT8 737 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 SLC9A7Q96T83 725 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 NOD1Q9Y239 953 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
VCX3A-201ENST00000381089 PITPNM1O00562 1244 aa18.8■□□□□ 0.6
VCX3A-201ENST00000381089 PTPN11Q06124 597 aaPredicted RBP18.8■□□□□ 0.6
VCX3A-201ENST00000381089 BFSP2Q13515 415 aa18.8■□□□□ 0.6
VCX3A-201ENST00000381089 TTLL4Q14679 1199 aa18.8■□□□□ 0.6
VCX3A-201ENST00000381089 SKIV2LQ15477 1246 aaKnown RBP18.8■□□□□ 0.6
VCX3A-201ENST00000381089 SLC30A10Q6XR72 485 aa18.8■□□□□ 0.6
VCX3A-201ENST00000381089 TICAM2Q86XR7 235 aa18.8■□□□□ 0.6
VCX3A-201ENST00000381089 CHD7Q9P2D1 2997 aa18.8■□□□□ 0.6
VCX3A-201ENST00000381089 WDR19Q8NEZ3 1342 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 NCOR1O75376 2440 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 KIF28PB7ZC32 967 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 PDHBP11177 359 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 PCP11498 1178 aaKnown RBP18.79■□□□□ 0.6
VCX3A-201ENST00000381089 MYOGP15173 224 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 NBPF20Q3BBV1 942 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 MCMDC2Q4G0Z9 681 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 PHOSPHO2Q8TCD6 241 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 TTC14Q96N46 770 aa18.79■□□□□ 0.6
VCX3A-201ENST00000381089 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.6
VCX3A-201ENST00000381089 ZMYM6O95789 1325 aa18.78■□□□□ 0.6
VCX3A-201ENST00000381089 FGAP02671 866 aa18.78■□□□□ 0.6
VCX3A-201ENST00000381089 CA3P07451 260 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms