RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KRTAP4-11Q9BYQ6 195 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 NKX2-4Q9H2Z4 354 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 CYP26B1Q9NR63 512 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 TMEFF2Q9UIK5 374 aaPredicted RBP7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 A0A1W2PQJ5 194 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 CCDC85CA6NKD9 419 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 MPOP05164 745 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 INF2Q27J81 1249 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 CRACR2BQ8N4Y2 399 aaPredicted RBP7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 FRS2Q8WU20 508 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 C8orf37Q96NL8 207 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 TRIM55Q9BYV6 548 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 GCM1Q9NP62 436 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 TNFRSF12AQ9NP84 129 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 PDLIM7Q9NR12 457 aa7.18□□□□□ -1.26
RNU4-28P-201ENST00000364739 A0A1W2PQU0 124 aa7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 C7orf72A4D263 438 aa7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 NFIBO00712 420 aa7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 SNRPB2P08579 225 aaKnown RBP7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 KCNJ6P48051 423 aa7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 DLG4P78352 724 aa7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 RPTNQ6XPR3 784 aa7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 BTG4Q9NY30 223 aa7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 PLA2G2DQ9UNK4 145 aa7.17□□□□□ -1.26
RNU4-28P-201ENST00000364739 ZC3H12DA2A288 527 aaKnown RBP7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 PEX10O60683 326 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 DBHP09172 617 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 EPHB3P54753 998 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 PPP2R2AP63151 447 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 YBX1P67809 324 aaKnown RBP7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 DENND5AQ6IQ26 1287 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 TMC6Q7Z403 805 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 CCDC103Q8IW40 242 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 CKAP2LQ8IYA6 745 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 NLGN2Q8NFZ4 835 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 NPLOC4Q8TAT6 608 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 DPF3Q92784 378 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 PPP1R16BQ96T49 567 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 CNTD2Q9H8S5 307 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 SIRT5Q9NXA8 310 aa7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 MBD1Q9UIS9 605 aaPredicted RBP7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 SMG5Q9UPR3 1016 aaKnown RBP7.16□□□□□ -1.26
RNU4-28P-201ENST00000364739 TEX51A0A1B0GUA7 166 aa7.15□□□□□ -1.26
RNU4-28P-201ENST00000364739 TSPAN15O95858 294 aa7.15□□□□□ -1.26
RNU4-28P-201ENST00000364739 FUCA1P04066 466 aa7.15□□□□□ -1.26
RNU4-28P-201ENST00000364739 HOXC12P31275 282 aa7.15□□□□□ -1.26
RNU4-28P-201ENST00000364739 CILP2Q8IUL8 1156 aa7.15□□□□□ -1.26
RNU4-28P-201ENST00000364739 TMEM145Q8NBT3 493 aa7.15□□□□□ -1.26
RNU4-28P-201ENST00000364739 KREMEN2Q8NCW0 462 aa7.15□□□□□ -1.26
RNU4-28P-201ENST00000364739 BCAS3Q9H6U6 928 aa7.15□□□□□ -1.26
RNU4-28P-201ENST00000364739 TCAF2A6NFQ2 919 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 F8W031 263 aaPredicted RBP7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 CAPNS1P04632 268 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 GLDCP23378 1020 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 ANKLE2Q86XL3 938 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 LZTR1Q8N653 840 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 USP33Q8TEY7 942 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 TOX2Q96NM4 488 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 MTA3Q9BTC8 594 aa7.14□□□□□ -1.27
RNU4-28P-201ENST00000364739 NPHS1O60500 1241 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 LCP1P13796 627 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 CFPP27918 469 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 GFRA1P56159 465 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 PRR5P85299 388 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 CBX2Q14781 532 aaPredicted RBP7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 PLEKHN1Q494U1 663 aaPredicted RBP7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 PAQR3Q6TCH7 311 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 SPATC1Q76KD6 591 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 TEX2Q8IWB9 1127 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 PANK1Q8TE04 598 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 MMP19Q99542 508 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 IER2Q9BTL4 223 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 CD320Q9NPF0 282 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 MARCH2Q9P0N8 246 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 SIT1Q9Y3P8 196 aa7.13□□□□□ -1.27
RNU4-28P-201ENST00000364739 TRBV23OR9-2A0A075B6M9 112 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 AGRPO00253 132 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 U2SURPO15042 1029 aaKnown RBP7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 SEMA7AO75326 666 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 CYBBP04839 570 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 GLI4P10075 376 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 CDR1P51861 262 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 CORO7P57737 925 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 ZNF200P98182 395 aaPredicted RBP7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 SSPNQ14714 243 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 KCNA10Q16322 511 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 YOD1Q5VVQ6 348 aaPredicted RBP7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 EPN3Q9H201 632 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 PFDN2Q9UHV9 154 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 FBXL7Q9UJT9 491 aa7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 DBR1Q9UK59 544 aaKnown RBP7.12□□□□□ -1.27
RNU4-28P-201ENST00000364739 ABLIM1O14639 778 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 NTRK1P04629 796 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 SCG5P05408 212 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 NR1I3Q14994 352 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 ZC3H14Q6PJT7 736 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms