RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 ECM2O94769 699 aaPredicted RBP20.1■□□□□ 0.81
CHGA-202ENST00000334654 XBP1P17861 261 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 HOXA13P31271 388 aaPredicted RBP20.1■□□□□ 0.81
CHGA-202ENST00000334654 DDIT3P35638 169 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 PSMC4P43686 418 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 ADCY7P51828 1080 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 UBE2SQ16763 222 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 WDR78Q5VTH9 848 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 ABRAQ8N0Z2 381 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 OXER1Q8TDS5 423 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 CUL5Q93034 780 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 IPO9Q96P70 1041 aaKnown RBP20.1■□□□□ 0.81
CHGA-202ENST00000334654 CWC22Q9HCG8 908 aaKnown RBP20.1■□□□□ 0.81
CHGA-202ENST00000334654 C6orf50Q9HD87 102 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 MAP3K20Q9NYL2 800 aaKnown RBP20.1■□□□□ 0.81
CHGA-202ENST00000334654 GJD2Q9UKL4 321 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 PCDHA4Q9UN74 947 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 FKTNO75072 461 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 FCER1AP12319 257 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 GNA11P29992 359 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
CHGA-202ENST00000334654 GRB14Q14449 540 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 MORN1Q5T089 497 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 GALNT17Q6IS24 598 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 RNF207Q6ZRF8 634 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 BLIDQ8IZY5 108 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 CD99L2Q8TCZ2 262 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 SYTL5Q8TDW5 730 aaPredicted RBP20.09■□□□□ 0.81
CHGA-202ENST00000334654 USP6NLQ92738 828 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 TNFRSF25Q93038 417 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 PURBQ96QR8 312 aaKnown RBP20.09■□□□□ 0.81
CHGA-202ENST00000334654 MMP19Q99542 508 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 PLXNA1Q9UIW2 1896 aa20.09■□□□□ 0.81
CHGA-202ENST00000334654 SLC15A5A6NIM6 579 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 GCOM1H8Y6P7 765 aaPredicted RBP20.08■□□□□ 0.81
CHGA-202ENST00000334654 FOXN1O15353 648 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 COBLO75128 1261 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 POLR2MP0CAP2 368 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 CALML3P27482 149 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 TRIM29Q14134 588 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 TEX2Q8IWB9 1127 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 CCAR1Q8IX12 1150 aaKnown RBP20.08■□□□□ 0.81
CHGA-202ENST00000334654 ANKRD35Q8N283 1001 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 GLT8D2Q9H1C3 349 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 TMEM260Q9NX78 707 aa20.08■□□□□ 0.81
CHGA-202ENST00000334654 BIN2Q9UBW5 565 aaPredicted RBP20.08■□□□□ 0.81
CHGA-202ENST00000334654 ASTN1O14525 1302 aa20.08■□□□□ 0.8
CHGA-202ENST00000334654 CASP8AP2Q9UKL3 1982 aa20.08■□□□□ 0.8
CHGA-202ENST00000334654 BTBD18B2RXH4 712 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 PGK2P07205 417 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 PDCP20941 246 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 ADORA2AP29274 412 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 CNTN2Q02246 1040 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 KCTD2Q14681 263 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 FAM133AQ8N9E0 248 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 RASGRP4Q8TDF6 673 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 FGD4Q96M96 766 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 PCDHA6Q9UN73 950 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 PCDHA8Q9Y5H6 950 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 PFASO15067 1338 aa20.07■□□□□ 0.8
CHGA-202ENST00000334654 TNPO2O14787 897 aaKnown RBP20.06■□□□□ 0.8
CHGA-202ENST00000334654 FCGRTP55899 365 aa20.06■□□□□ 0.8
CHGA-202ENST00000334654 NR5A1Q13285 461 aa20.06■□□□□ 0.8
CHGA-202ENST00000334654 PKP1Q13835 747 aa20.06■□□□□ 0.8
CHGA-202ENST00000334654 DIS3L2Q8IYB7 885 aaKnown RBP20.06■□□□□ 0.8
CHGA-202ENST00000334654 TAAR1Q96RJ0 339 aa20.06■□□□□ 0.8
CHGA-202ENST00000334654 MTMR6Q9Y217 621 aa20.06■□□□□ 0.8
CHGA-202ENST00000334654 IVNS1ABPQ9Y6Y0 642 aa20.06■□□□□ 0.8
CHGA-202ENST00000334654 MYH7BA7E2Y1 1941 aa20.06■□□□□ 0.8
CHGA-202ENST00000334654 SOWAHBA6NEL2 793 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 KIF28PB7ZC32 967 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 STX6O43752 255 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 HSPA1AP0DMV8 641 aaKnown RBP20.05■□□□□ 0.8
CHGA-202ENST00000334654 HSPA1BP0DMV9 641 aaKnown RBP20.05■□□□□ 0.8
CHGA-202ENST00000334654 HSPA8P11142 646 aaKnown RBP20.05■□□□□ 0.8
CHGA-202ENST00000334654 ZNF792Q3KQV3 632 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 EARS2Q5JPH6 523 aaKnown RBP20.05■□□□□ 0.8
CHGA-202ENST00000334654 JAKMIP3Q5VZ66 844 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 REXO1Q8N1G1 1221 aaKnown RBP20.05■□□□□ 0.8
CHGA-202ENST00000334654 BICD2Q8TD16 824 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 EDIL3O43854 480 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 U2AF2P26368 475 aaKnown RBP eCLIP20.05■□□□□ 0.8
CHGA-202ENST00000334654 KRT2P35908 639 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 MAP2K5Q13163 448 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 KIF22Q14807 665 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 FCHSD1Q86WN1 690 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 ERO1AQ96HE7 468 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 PGBD1Q96JS3 809 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 GABRQQ9UN88 632 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 ZDHHC9Q9Y397 364 aa20.05■□□□□ 0.8
CHGA-202ENST00000334654 FRMPD4Q14CM0 1322 aa20.04■□□□□ 0.8
CHGA-202ENST00000334654 H3BQV1 296 aa20.04■□□□□ 0.8
CHGA-202ENST00000334654 POTEB2H3BUK9 544 aa20.04■□□□□ 0.8
CHGA-202ENST00000334654 HOXC6P09630 235 aa20.04■□□□□ 0.8
CHGA-202ENST00000334654 IFFO2Q5TF58 517 aa20.04■□□□□ 0.8
CHGA-202ENST00000334654 NPLOC4Q8TAT6 608 aa20.04■□□□□ 0.8
CHGA-202ENST00000334654 FOXP1Q9H334 677 aaPredicted RBP20.04■□□□□ 0.8
CHGA-202ENST00000334654 MCM3APO60318 1980 aa20.03■□□□□ 0.8
CHGA-202ENST00000334654 RPTORQ8N122 1335 aa20.03■□□□□ 0.8
CHGA-202ENST00000334654 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms