RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 GPSM3Q9Y4H4 160 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 WDR87Q6ZQQ6 2873 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 CACNA1FO60840 1977 aa8.19□□□□□ -1.1
CSTF3-201ENST00000323959 PICALMQ13492 652 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 DUSP27Q5VZP5 1158 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 LAIR1Q6GTX8 287 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 RIOX2Q8IUF8 465 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 NEK1Q96PY6 1258 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 PI4KBQ9UBF8 816 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 CTNNB1P35222 781 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 CCDC57Q2TAC2 916 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 CCDC144BQ3MJ40 725 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.18□□□□□ -1.1
CSTF3-201ENST00000323959 TMCO2Q7Z6W1 182 aaPredicted RBP8.18□□□□□ -1.1
CSTF3-201ENST00000323959 ERVK-5Q9HDB9 667 aa8.18□□□□□ -1.1
CSTF3-201ENST00000323959 TRMT13Q9NUP7 481 aaKnown RBP8.18□□□□□ -1.1
CSTF3-201ENST00000323959 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.18□□□□□ -1.1
CSTF3-201ENST00000323959 SUPT16HQ9Y5B9 1047 aaKnown RBP8.18□□□□□ -1.1
CSTF3-201ENST00000323959 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.17□□□□□ -1.1
CSTF3-201ENST00000323959 SELPP16109 830 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 CSRP2Q16527 193 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 PHLDB3Q6NSJ2 640 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 NFRKBQ6P4R8 1299 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 FOXP4Q8IVH2 680 aaPredicted RBP8.17□□□□□ -1.1
CSTF3-201ENST00000323959 CDCA7LQ96GN5 454 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 J3QKU1 62 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 SEMA3EO15041 775 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 GRM6O15303 877 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 GLP2RO95838 553 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 BMPR1AP36894 532 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 RHBDL3P58872 404 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 BEX3Q00994 111 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 TMEM184AQ6ZMB5 413 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 MAP4K1Q92918 833 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 PHAXQ9H814 394 aaKnown RBP8.17□□□□□ -1.1
CSTF3-201ENST00000323959 ZSCAN32Q9NX65 697 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 WASF3Q9UPY6 502 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 PARP14Q460N5 1801 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 PATJQ8NI35 1801 aa8.17□□□□□ -1.1
CSTF3-201ENST00000323959 CAPN8A6NHC0 703 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 ADCY6O43306 1168 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 GTF2F1P35269 517 aaKnown RBP eCLIP8.16□□□□□ -1.1
CSTF3-201ENST00000323959 CCR10P46092 362 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 PLCD1P51178 756 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 IRX5P78411 483 aaPredicted RBP8.16□□□□□ -1.1
CSTF3-201ENST00000323959 FOXO4P98177 505 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 ZBTB44Q8NCP5 570 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 ATRIPQ8WXE1 791 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 NELL1Q92832 810 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 P2RX5Q93086 422 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 ANP32EQ9BTT0 268 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 ASTN1O14525 1302 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 TM4SF5O14894 197 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 HOXB8P17481 243 aaPredicted RBP8.16□□□□□ -1.1
CSTF3-201ENST00000323959 KCNA4P22459 653 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 MAGEA9P43362 315 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 PRR23CQ6ZRP0 262 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 WWC1Q8IX03 1113 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 LSM14AQ8ND56 463 aaKnown RBP8.16□□□□□ -1.1
CSTF3-201ENST00000323959 UBL7Q96S82 380 aaPredicted RBP8.16□□□□□ -1.1
CSTF3-201ENST00000323959 YME1L1Q96TA2 773 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 S1PR5Q9H228 398 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 GPR108Q9NPR9 543 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 DUSP12Q9UNI6 340 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 SPTBN2O15020 2390 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 TET1Q8NFU7 2136 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 GPR75-ASB3A0A0A6YYF3 556 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 RETP07949 1114 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 BTDP43251 543 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 TNFAIP2Q03169 654 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 AAMPQ13685 434 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 LRRC8DQ7L1W4 858 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 TLK2Q86UE8 772 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 FIBCD1Q8N539 461 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 SPATA18Q8TC71 538 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 BBC3Q96PG8 261 aaPredicted RBP8.16□□□□□ -1.1
CSTF3-201ENST00000323959 TRIM34Q9BYJ4 488 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 CLMPQ9H6B4 373 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 DLGAP2Q9P1A6 1054 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 RAB23Q9ULC3 237 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 BARX2Q9UMQ3 279 aaPredicted RBP8.16□□□□□ -1.1
CSTF3-201ENST00000323959 GNEQ9Y223 722 aaKnown RBP8.16□□□□□ -1.1
CSTF3-201ENST00000323959 NEUROG3Q9Y4Z2 214 aa8.16□□□□□ -1.1
CSTF3-201ENST00000323959 PGK2P07205 417 aa8.15□□□□□ -1.1
CSTF3-201ENST00000323959 IFIT1P09914 478 aaKnown RBP8.15□□□□□ -1.1
CSTF3-201ENST00000323959 HOXD8P13378 290 aaPredicted RBP8.15□□□□□ -1.1
CSTF3-201ENST00000323959 RFX1P22670 979 aa8.15□□□□□ -1.1
CSTF3-201ENST00000323959 PRDX5P30044 214 aa8.15□□□□□ -1.1
CSTF3-201ENST00000323959 PSMC6P62333 389 aa8.15□□□□□ -1.1
CSTF3-201ENST00000323959 JAG1P78504 1218 aa8.15□□□□□ -1.1
CSTF3-201ENST00000323959 TDRD5Q8NAT2 981 aaKnown RBP8.15□□□□□ -1.1
CSTF3-201ENST00000323959 MTG1Q9BT17 334 aaPredicted RBP8.15□□□□□ -1.1
CSTF3-201ENST00000323959 WNT16Q9UBV4 365 aa8.15□□□□□ -1.1
CSTF3-201ENST00000323959 FBXL21Q9UKT6 434 aa8.15□□□□□ -1.1
CSTF3-201ENST00000323959 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.15□□□□□ -1.1
CSTF3-201ENST00000323959 DNAJC25-GNG10A0A024R161 153 aa8.15□□□□□ -1.11
CSTF3-201ENST00000323959 C2CD4DB7Z1M9 353 aa8.15□□□□□ -1.11
CSTF3-201ENST00000323959 KPNA6O60684 536 aa8.15□□□□□ -1.11
CSTF3-201ENST00000323959 NEFLP07196 543 aa8.15□□□□□ -1.11
CSTF3-201ENST00000323959 GPNMBQ14956 572 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms