RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 LDHBP07195 334 aaKnown RBP24.72■■□□□ 1.55
CDR2-201ENST00000268383 UIMC1Q96RL1 719 aa24.72■■□□□ 1.55
CDR2-201ENST00000268383 MMTAG2Q9BU76 263 aaKnown RBP24.72■■□□□ 1.55
CDR2-201ENST00000268383 EHD2Q9NZN4 543 aa24.72■■□□□ 1.55
CDR2-201ENST00000268383 ANKIB1Q9P2G1 1089 aa24.72■■□□□ 1.55
CDR2-201ENST00000268383 COL22A1Q8NFW1 1626 aaPredicted RBP24.72■■□□□ 1.55
CDR2-201ENST00000268383 RNF40O75150 1001 aa24.72■■□□□ 1.55
CDR2-201ENST00000268383 CYLC1P35663 651 aaPredicted RBP24.72■■□□□ 1.55
CDR2-201ENST00000268383 TXKP42681 527 aa24.72■■□□□ 1.55
CDR2-201ENST00000268383 DHTKD1Q96HY7 919 aaPredicted RBP24.72■■□□□ 1.55
CDR2-201ENST00000268383 CAPN6Q9Y6Q1 641 aa24.72■■□□□ 1.55
CDR2-201ENST00000268383 CCDC88AQ3V6T2 1871 aa24.72■■□□□ 1.55
CDR2-201ENST00000268383 PALM3A6NDB9 673 aaPredicted RBP24.71■■□□□ 1.55
CDR2-201ENST00000268383 RASA1P20936 1047 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 SETDB2Q96T68 719 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 CXCR5P32302 372 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 MATR3P43243 847 aaKnown RBP eCLIP24.71■■□□□ 1.55
CDR2-201ENST00000268383 ZBED6P86452 979 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 CCDC96Q2M329 555 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 LEKR1Q6ZMV7 388 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 ANKRD13CQ8N6S4 541 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 GLIS3Q8NEA6 775 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 HDAC7Q8WUI4 952 aa24.71■■□□□ 1.55
CDR2-201ENST00000268383 FKBP15Q5T1M5 1219 aa24.7■■□□□ 1.55
CDR2-201ENST00000268383 CCDC155Q8N6L0 562 aa24.7■■□□□ 1.55
CDR2-201ENST00000268383 FAM71BQ8TC56 605 aa24.7■■□□□ 1.55
CDR2-201ENST00000268383 TBCKQ8TEA7 893 aa24.7■■□□□ 1.55
CDR2-201ENST00000268383 IPO7O95373 1038 aaKnown RBP24.7■■□□□ 1.54
CDR2-201ENST00000268383 NFIXQ14938 502 aa24.7■■□□□ 1.54
CDR2-201ENST00000268383 C2CD5Q86YS7 1000 aa24.7■■□□□ 1.54
CDR2-201ENST00000268383 PIGSQ96S52 555 aa24.7■■□□□ 1.54
CDR2-201ENST00000268383 HPCAL4Q9UM19 191 aa24.7■■□□□ 1.54
CDR2-201ENST00000268383 TUBB4BP68371 445 aa24.7■■□□□ 1.54
CDR2-201ENST00000268383 SLC10A5Q5PT55 438 aa24.7■■□□□ 1.54
CDR2-201ENST00000268383 COG1Q8WTW3 980 aa24.7■■□□□ 1.54
CDR2-201ENST00000268383 GJA10Q969M2 543 aa24.7■■□□□ 1.54
CDR2-201ENST00000268383 MOCS3O95396 460 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 DAGLBQ8NCG7 672 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 CCDC42Q96M95 316 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 ARHGAP20Q9P2F6 1191 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 EIF3CLB5ME19 914 aaKnown RBP24.69■■□□□ 1.54
CDR2-201ENST00000268383 MYO1CO00159 1063 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 GNAQP50148 359 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 NONOQ15233 471 aaKnown RBP eCLIP24.69■■□□□ 1.54
CDR2-201ENST00000268383 LRRC41Q15345 812 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 EIF3CQ99613 913 aaKnown RBP24.69■■□□□ 1.54
CDR2-201ENST00000268383 ANKRD2Q9GZV1 360 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 ZMYND12Q9H0C1 365 aa24.69■■□□□ 1.54
CDR2-201ENST00000268383 RREB1Q92766 1687 aa24.68■■□□□ 1.54
CDR2-201ENST00000268383 TM4SF1P30408 202 aa24.68■■□□□ 1.54
CDR2-201ENST00000268383 MMRN2Q9H8L6 949 aa24.68■■□□□ 1.54
CDR2-201ENST00000268383 ZC3H4Q9UPT8 1303 aaKnown RBP24.68■■□□□ 1.54
CDR2-201ENST00000268383 GGCXP38435 758 aa24.68■■□□□ 1.54
CDR2-201ENST00000268383 KIF5AQ12840 1032 aa24.68■■□□□ 1.54
CDR2-201ENST00000268383 ANKS1AQ92625 1134 aa24.68■■□□□ 1.54
CDR2-201ENST00000268383 SECISBP2LQ93073 1101 aaKnown RBP24.68■■□□□ 1.54
CDR2-201ENST00000268383 NUDT12Q9BQG2 462 aa24.68■■□□□ 1.54
CDR2-201ENST00000268383 WNK3Q9BYP7 1800 aa24.68■■□□□ 1.54
CDR2-201ENST00000268383 SLC7A5Q01650 507 aa24.67■■□□□ 1.54
CDR2-201ENST00000268383 FRMPD2Q68DX3 1309 aaPredicted RBP24.67■■□□□ 1.54
CDR2-201ENST00000268383 BICDL2A1A5D9 508 aa24.67■■□□□ 1.54
CDR2-201ENST00000268383 POTEMA6NI47 508 aa24.67■■□□□ 1.54
CDR2-201ENST00000268383 MYMKA6NI61 221 aa24.67■■□□□ 1.54
CDR2-201ENST00000268383 NCK2O43639 380 aa24.67■■□□□ 1.54
CDR2-201ENST00000268383 PRPHP41219 470 aa24.67■■□□□ 1.54
CDR2-201ENST00000268383 NEK8Q86SG6 692 aa24.67■■□□□ 1.54
CDR2-201ENST00000268383 C7orf25Q9BPX7 421 aa24.67■■□□□ 1.54
CDR2-201ENST00000268383 VAV2P52735 878 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 NFRKBQ6P4R8 1299 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 LRRC31Q6UY01 552 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 EYA3Q99504 573 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 SELENOOQ9BVL4 669 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 RRP15Q9Y3B9 282 aaKnown RBP24.66■■□□□ 1.54
CDR2-201ENST00000268383 EIF4A3P38919 411 aaKnown RBP24.66■■□□□ 1.54
CDR2-201ENST00000268383 CLEC10AQ8IUN9 316 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 NOC3LQ8WTT2 800 aaKnown RBP24.66■■□□□ 1.54
CDR2-201ENST00000268383 COA7Q96BR5 231 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 NUP58Q9BVL2 599 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 TRIM34Q9BYJ4 488 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 IFIH1Q9BYX4 1025 aaKnown RBP24.66■■□□□ 1.54
CDR2-201ENST00000268383 BLOC1S4Q9NUP1 217 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 DMGDHQ9UI17 866 aaKnown RBP24.66■■□□□ 1.54
CDR2-201ENST00000268383 SALL4Q9UJQ4 1053 aa24.66■■□□□ 1.54
CDR2-201ENST00000268383 IRS2Q9Y4H2 1338 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 MYL1P05976 194 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 CDK8P49336 464 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 GRB10Q13322 594 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 TMED8Q6PL24 325 aaPredicted RBP24.65■■□□□ 1.54
CDR2-201ENST00000268383 RRP36Q96EU6 259 aaKnown RBP24.65■■□□□ 1.54
CDR2-201ENST00000268383 USP17L5A8MUK1 530 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 SLC37A4O43826 429 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 PRPF6O94906 941 aaKnown RBP24.65■■□□□ 1.54
CDR2-201ENST00000268383 TDP2O95551 362 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 EIF6P56537 245 aaKnown RBP24.65■■□□□ 1.54
CDR2-201ENST00000268383 SPA17Q15506 151 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 FAM182BQ5T319 152 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 SPTY2D1Q68D10 685 aaPredicted RBP24.65■■□□□ 1.54
CDR2-201ENST00000268383 CREG2Q8IUH2 290 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 CCDC170Q8IYT3 715 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 MSL3Q8N5Y2 521 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms