RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 KIF28PB7ZC32 967 aa11.93□□□□□ -0.5
GTF3C2-201ENST00000264720 CALML3P27482 149 aa11.93□□□□□ -0.5
GTF3C2-201ENST00000264720 EIF6P56537 245 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-201ENST00000264720 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
GTF3C2-201ENST00000264720 CERKLQ49MI3 558 aaPredicted RBP11.93□□□□□ -0.5
GTF3C2-201ENST00000264720 SPON1Q9HCB6 807 aa11.93□□□□□ -0.5
GTF3C2-201ENST00000264720 PPP1R12AO14974 1030 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 SPTLC2O15270 562 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 RILPL1Q5EBL4 403 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 CLIC6Q96NY7 704 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 VPS54Q9P1Q0 977 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 COL2A1P02458 1487 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 SHTN1A0MZ66 631 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 SMARCA1P28370 1054 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 NLRP5P59047 1200 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 PFKFB3Q16875 520 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 ZNF70Q9UC06 446 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 PALM3A6NDB9 673 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 BTBD18B2RXH4 712 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 KLRF2D3W0D1 207 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 RNF40O75150 1001 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 PPFIA4O75335 1185 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 ZMYND10O75800 440 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 GBP2P32456 591 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 CDR1P51861 262 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 PKN1Q16512 942 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 ASPRV1Q53RT3 343 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 LINC00301Q8NCQ3 95 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 CCDC148Q8NFR7 591 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 BCAS4Q8TDM0 211 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 SH3GLB2Q9NR46 395 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 MAD2L2Q9UI95 211 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 CEP131Q9UPN4 1083 aa11.92□□□□□ -0.5
GTF3C2-201ENST00000264720 DDTLA6NHG4 134 aaPredicted RBP11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 ZEB2O60315 1214 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 ELF1P32519 619 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 PTGER2P43116 358 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 NOVP48745 357 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 SF3A3Q12874 501 aaKnown RBP eCLIP11.91□□□□□ -0.52e-6■■□□□ 13.3
GTF3C2-201ENST00000264720 ATRNL1Q5VV63 1379 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 OTUD6BQ8N6M0 293 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 FAM151AQ8WW52 585 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 SEC63Q9UGP8 760 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 NFKBIEO00221 500 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 SUGP1Q8IWZ8 645 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 CSRNP1Q96S65 589 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 PHF20Q9BVI0 1012 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 SPZ1Q9BXG8 430 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 KANSL2Q9H9L4 492 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 HERC5Q9UII4 1024 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 IGKV6D-41A0A0C4DH26 115 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 hCG_1642624A0A1W2PR95 340 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 EIF4E1BA6NMX2 242 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 TCP10L2B9ZVM9 353 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 UBE2Q2LH0YL09 131 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 ZSCAN12O43309 604 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 SSR1P43307 286 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 TNNI2P48788 182 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 NAP1L1P55209 391 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 IQCB1Q15051 598 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 STAG2Q8N3U4 1231 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 CLIC4Q9Y696 253 aa11.91□□□□□ -0.5
GTF3C2-201ENST00000264720 CLRN2A0PK11 232 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 CCP110O43303 1012 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 ADALQ6DHV7 355 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 TMEM179Q6ZVK1 233 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 TXLNAP40222 546 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 NEDD9Q14511 834 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 SLC39A14Q15043 492 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 RBM26Q5T8P6 1007 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 AP1ARQ63HQ0 302 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 A0A1B0GVL5 298 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 A0A1W2PQ27 194 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 A0A1W2PQ64 194 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 A0A1W2PQD8 194 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 CCDC189A1A4V9 331 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 ATP8B1O43520 1251 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 ATP1A3P13637 1013 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 CASP8Q14790 479 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 ABCB5Q2M3G0 1257 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 GALNT17Q6IS24 598 aa11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 MRPS27Q92552 414 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-201ENST00000264720 ENO4A6NNW6 628 aa11.89□□□□□ -0.51
GTF3C2-201ENST00000264720 CAND2O75155 1236 aa11.89□□□□□ -0.51
GTF3C2-201ENST00000264720 UBASH3AP57075 661 aa11.89□□□□□ -0.51
GTF3C2-201ENST00000264720 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
GTF3C2-201ENST00000264720 CRACR2AQ9BSW2 395 aa11.89□□□□□ -0.51
GTF3C2-201ENST00000264720 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.89□□□□□ -0.51
GTF3C2-201ENST00000264720 COL4A5P29400 1685 aa11.89□□□□□ -0.51
GTF3C2-201ENST00000264720 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms