RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 RNF41Q9H4P4 317 aaPredicted RBP15.13■□□□□ 0.01
GABPB1-201ENST00000220429 PICK1Q9NRD5 415 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 MINDY4BA8MYZ0 360 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 TMEM232C9JQI7 657 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 FMNL1O95466 1100 aaPredicted RBP15.13■□□□□ 0.01
GABPB1-201ENST00000220429 OATP04181 439 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 IFNAR1P17181 557 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
GABPB1-201ENST00000220429 PTPN21Q16825 1174 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 RINLQ6ZS11 566 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 ZPR1O75312 459 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
GABPB1-201ENST00000220429 SLC39A14Q15043 492 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 CCDC121Q6ZUS5 278 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 ZNF473Q8WTR7 871 aaKnown RBP15.12■□□□□ 0.01
GABPB1-201ENST00000220429 TBC1D31Q96DN5 1066 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 MTA3Q9BTC8 594 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 EPN3Q9H201 632 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 HSD3B7Q9H2F3 369 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 BIN2Q9UBW5 565 aaPredicted RBP15.12■□□□□ 0.01
GABPB1-201ENST00000220429 CCNL1Q9UK58 526 aaPredicted RBP15.12■□□□□ 0.01
GABPB1-201ENST00000220429 GUCY1A2P33402 732 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 USP14P54578 494 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 SLMAPQ14BN4 828 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 NUP58Q9BVL2 599 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 LY75O60449 1722 aa15.12■□□□□ 0.01
GABPB1-201ENST00000220429 MROH7-TTC4A0A0A0MT08 1334 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 MGRN1O60291 552 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 MARCKSP29966 332 aaPredicted RBP15.11■□□□□ 0.01
GABPB1-201ENST00000220429 NLRP12P59046 1061 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 RTN1Q16799 776 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 STAMBPL1Q96FJ0 436 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 TSPAN18Q96SJ8 248 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 SELENOOQ9BVL4 669 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 USP21Q9UK80 565 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 C15orf41Q9Y2V0 281 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 SBF2Q86WG5 1849 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 KIF4AO95239 1232 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 TBX2Q13207 712 aaPredicted RBP15.11■□□□□ 0.01
GABPB1-201ENST00000220429 TRIM29Q14134 588 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 PTPAQ15257 358 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 TC2NQ8N9U0 490 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 ARHGEF1Q92888 912 aaKnown RBP15.11■□□□□ 0.01
GABPB1-201ENST00000220429 FAM163AQ96GL9 167 aaPredicted RBP15.11■□□□□ 0.01
GABPB1-201ENST00000220429 TSC22D3Q99576 134 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.11■□□□□ 0.01
GABPB1-201ENST00000220429 CCDC88AQ3V6T2 1871 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
GABPB1-201ENST00000220429 EP400Q96L91 3159 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 TNRC6CQ9HCJ0 1690 aaKnown RBP15.1■□□□□ 0.01
GABPB1-201ENST00000220429 CYP2D7A0A087X1C5 515 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 LIN7AO14910 233 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-201ENST00000220429 RNF8O76064 485 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 MYL1P05976 194 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 LINGO3P0C6S8 592 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 GNAT1P11488 350 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 CMA1P23946 247 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 ADKP55263 362 aaKnown RBP15.1■□□□□ 0.01
GABPB1-201ENST00000220429 CCDC178Q5BJE1 867 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 MTHFD1LQ6UB35 978 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 C6orf89Q6UWU4 347 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 MAP3K14Q99558 947 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 RTCBQ9Y3I0 505 aaKnown RBP15.1■□□□□ 0.01
GABPB1-201ENST00000220429 PFKFB1P16118 471 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 CDC25CP30307 473 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 SEC23AQ15436 765 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 LRRC23Q53EV4 343 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-201ENST00000220429 TPTE2Q6XPS3 522 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 ZNF654Q8IZM8 581 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 CMTR1Q8N1G2 835 aaKnown RBP15.1■□□□□ 0.01
GABPB1-201ENST00000220429 TMTC2Q8N394 836 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 NSUN4Q96CB9 384 aaKnown RBP15.1■□□□□ 0.01
GABPB1-201ENST00000220429 RBM41Q96IZ5 413 aaKnown RBP15.1■□□□□ 0.01
GABPB1-201ENST00000220429 TMEM165Q9HC07 324 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 NOD2Q9HC29 1040 aa15.1■□□□□ 0.01
GABPB1-201ENST00000220429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.1■□□□□ 0.014e-7■■■■■ 57.7
GABPB1-201ENST00000220429 OPLAHO14841 1288 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 SEMA3EO15041 775 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 OPA1O60313 960 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 ATP6V1G2O95670 118 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 TM4SF1P30408 202 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 LSP1P33241 339 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 CUL5Q93034 780 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 NAPGQ99747 312 aaPredicted RBP15.09■□□□□ 0.01
GABPB1-201ENST00000220429 UBAC1Q9BSL1 405 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 BRIP1Q9BX63 1249 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 TNKSO95271 1327 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 B4DLN1 442 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 MYO1BO43795 1136 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 PPP6R2O75170 966 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 MTF1Q14872 753 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 TRIM42Q8IWZ5 723 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 SLC35F6Q8N357 371 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 CCDC82Q8N4S0 544 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 ESR2Q92731 530 aa15.09■□□□□ 0.01
GABPB1-201ENST00000220429 HIBADHP31937 336 aaKnown RBP15.08■□□□□ 0.01
GABPB1-201ENST00000220429 RCAN1P53805 252 aa15.08■□□□□ 0.01
GABPB1-201ENST00000220429 XRCC4Q13426 336 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms