RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 GLE1Q53GS7 698 aaKnown RBP11.11□□□□□ -0.63
CLDN18-201ENST00000183605 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
CLDN18-201ENST00000183605 FBXL16Q8N461 479 aa11.11□□□□□ -0.63
CLDN18-201ENST00000183605 STAMBPL1Q96FJ0 436 aa11.11□□□□□ -0.63
CLDN18-201ENST00000183605 ATP6V0A4Q9HBG4 840 aa11.11□□□□□ -0.63
CLDN18-201ENST00000183605 GPR108Q9NPR9 543 aa11.11□□□□□ -0.63
CLDN18-201ENST00000183605 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
CLDN18-201ENST00000183605 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
CLDN18-201ENST00000183605 PLEKHG1Q9ULL1 1385 aa11.11□□□□□ -0.63
CLDN18-201ENST00000183605 IFNAR2P48551 515 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 CCNHP51946 323 aaPredicted RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 MAGOHP61326 146 aaKnown RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 AKNAD1Q5T1N1 836 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 PPP4R3AQ6IN85 833 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 MAGOHBQ96A72 148 aaKnown RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 DNAJC7Q99615 494 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 RNF41Q9H4P4 317 aaPredicted RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 TSKSQ9UJT2 592 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 CCDC194A0A1B0GVG4 234 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 CCDC189A1A4V9 331 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 PCK1P35558 622 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 ZC3H6P61129 1189 aaKnown RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 NTRK3Q16288 839 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 MAGEB6Q8N7X4 407 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 NOP53Q9NZM5 478 aaKnown RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 PACSIN2Q9UNF0 486 aaPredicted RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 DIAPH2O60879 1101 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 RASSF9O75901 435 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 LACTBP83111 547 aaPredicted RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 RABL6Q3YEC7 729 aaPredicted RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 ANKRD20A8PQ5CZ79 823 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 TOM1L2Q6ZVM7 507 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 PROSER2Q86WR7 435 aaPredicted RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 MIGA1Q8NAN2 632 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 RETREG2Q8NC44 543 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 PROCA1Q8NCQ7 364 aaPredicted RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 CUL5Q93034 780 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 NSRP1Q9H0G5 558 aaKnown RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 DPH5Q9H2P9 285 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 LRP2BPQ9P2M1 347 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 PHF8Q9UPP1 1060 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 L3MBTL1Q9Y468 752 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 CD2APQ9Y5K6 639 aa11.1□□□□□ -0.63
CLDN18-201ENST00000183605 COL16A1Q07092 1604 aaPredicted RBP11.1□□□□□ -0.63
CLDN18-201ENST00000183605 LIFRP42702 1097 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 PPP2R2AP63151 447 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 WDR59Q6PJI9 974 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 CAVIN3Q969G5 261 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 KCNB1Q14721 858 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 PDIA6Q15084 440 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 GNPTABQ3T906 1256 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 ACCSLQ4AC99 568 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 IFIT1BQ5T764 474 aaKnown RBP11.09□□□□□ -0.63
CLDN18-201ENST00000183605 TMC4Q7Z404 712 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 CDK5RAP3Q96JB5 506 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 ELAC2Q9BQ52 826 aaKnown RBP11.09□□□□□ -0.63
CLDN18-201ENST00000183605 SH2D4AQ9H788 454 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 BATF3Q9NR55 127 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 IRAK4Q9NWZ3 460 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 ABCC6O95255 1503 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 DNM1LO00429 736 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 MARCH6O60337 910 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 SMIM24O75264 130 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 ANP32DO95626 131 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 PDE6AP16499 860 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 MRPL12P52815 198 aaKnown RBP11.09□□□□□ -0.63
CLDN18-201ENST00000183605 RPS6KA1Q15418 735 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 ARMC9Q7Z3E5 817 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 IFNL3Q8IZI9 196 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 HELBQ8NG08 1087 aaPredicted RBP11.09□□□□□ -0.63
CLDN18-201ENST00000183605 HOOK2Q96ED9 719 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 TCP11L1Q9NUJ3 509 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
CLDN18-201ENST00000183605 LRRC10BA6NIK2 292 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 ATP11AP98196 1134 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 UHMK1Q8TAS1 419 aaKnown RBP11.08□□□□□ -0.64
CLDN18-201ENST00000183605 LMBR1Q8WVP7 490 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 RUBCNQ92622 972 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 ABCF2Q9UG63 623 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 GGT7Q9UJ14 662 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 XDHP47989 1333 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.08□□□□□ -0.64
CLDN18-201ENST00000183605 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.08□□□□□ -0.64
CLDN18-201ENST00000183605 TUBGCP6Q96RT7 1819 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 TRIM37O94972 964 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 GFPT1Q06210 699 aaPredicted RBP11.08□□□□□ -0.64
CLDN18-201ENST00000183605 MTMR3Q13615 1198 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 RAPGEF1Q13905 1077 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 SLC9C1Q4G0N8 1177 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 TTLL7Q6ZT98 887 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 SGMS1Q86VZ5 419 aa11.08□□□□□ -0.64
CLDN18-201ENST00000183605 DDX42Q86XP3 938 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLDN18-201ENST00000183605 CASKIN2Q8WXE0 1202 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms