RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Mipol1Q9D9F8 279 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Kcnd1Q03719 651 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Atp8b1Q148W0 1251 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Plekhf1Q3TB82 279 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Clul1Q3ZRW6 464 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Tsga10Q6NY15 697 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Tspyl4Q8VD63 406 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Myl7Q9QVP4 175 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Fbf1A2A870 1173 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Slc12a2P55012 1205 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Trappc10Q3TLI0 1259 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ccdc33Q3ULW6 985 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Skap2Q3UND0 358 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Traf3ip3Q8C0G2 513 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Spata16Q8C636 571 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Zfp853A0A1D5RM95 733 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pla2g4bP0C871 782 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ftl1P29391 183 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Nr5a1P33242 462 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Rhbdl3P58873 404 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Surf6P70279 355 aaKnown RBP11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Zfp781Q0P5U5 243 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Rpusd2Q149F1 553 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Nlrx1Q3TL44 975 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 P4ha1Q60715 534 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pdzph1Q8BGR1 1238 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Srgap2Q91Z67 1071 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Myo3bQ1EG27 1305 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Frmd7A2AD83 703 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 GscQ02591 256 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Krt15Q61414 452 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Krt87Q6IMF0 495 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ifih1Q8R5F7 1025 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Stx17Q9D0I4 301 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ccdc89Q9DA73 370 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Gkap1Q9JMB0 366 aa11.99□□□□□ -0.49
Msh3-201ENSMUST00000022220 Gm11549A0A286YD83 63 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ppp1r9aH3BJD6 1292 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ube3aO08759 870 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Fam89aQ14BJ1 175 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ankrd13cQ3UX43 541 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Tspyl3Q3UYP3 334 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ccdc42Q5SV66 316 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Gas7Q60780 421 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ercc4Q9QZD4 917 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pex11aQ9Z211 246 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Dhx37Q6NZL1 1150 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Spag7Q7TNE3 227 aaKnown RBP11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Cct8l1Q80YT3 562 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 OscarQ8VBT3 265 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Sf3a3Q9D554 501 aaKnown RBP11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Rsbn1lD3Z0K6 821 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 C2cd2E9Q3C1 696 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ca8P28651 291 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Sox5P35710 763 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 IarsQ8BU30 1262 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Tc2nQ91XT6 489 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Fam217aQ9D9W6 419 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Kank3Q9Z1P7 791 aa11.98□□□□□ -0.49
Msh3-201ENSMUST00000022220 Bpifb4A2BGH0 617 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Gm10134F6ZQC6 126 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Klra1P20937 262 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Tcp11Q01755 566 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ric8aQ3TIR3 530 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Tmem132dQ76HP3 1097 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Osbpl2Q8BX94 484 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Washc1Q8VDD8 475 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 SncbQ91ZZ3 133 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 AdarQ99MU3 1178 aaKnown RBP11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 SufuQ9Z0P7 484 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pfkfb3A7UAK5 555 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Cdh15P33146 784 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Nab2Q61127 525 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Npdc1Q64322 332 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Epn1Q80VP1 575 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Csgalnact2Q8C1F4 542 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pik3c2aQ61194 1686 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Fyb2A2A995 729 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 ChkbO55229 394 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 LdhbP16125 334 aaKnown RBP11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pla2g4aP47713 748 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Q3UJP5 209 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Sfi1Q3UZY0 1216 aaKnown RBP11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Usp13Q5BKP2 858 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Psen2Q61144 448 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Krit1Q6S5J6 736 aa11.97□□□□□ -0.49
Msh3-201ENSMUST00000022220 Eftud2O08810 971 aaKnown RBP11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Hnrnph1O35737 449 aaKnown RBP11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Nr1i2O54915 431 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 D1Pas1P16381 660 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Serpinc1P32261 465 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 DSCC1Q14AI0 399 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Mier3Q3UHF3 551 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Tsr1Q5SWD9 803 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 PrimpolQ6P1E7 537 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Lrrc45Q8CIM1 670 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Snrnp35Q9D384 244 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Gm36210A0A1B0GS00 229 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Mageb2A2AHM0 380 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Cetn3O35648 167 aa11.96□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms