RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 NptxrQ99J85 493 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ddx47Q9CWX9 455 aaKnown RBP12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ppil4Q9CXG3 492 aaKnown RBP12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Setdb1O88974 1307 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Sik3Q6P4S6 1311 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 1700122O11RikJ3QPW6 241 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Gm4340L7N2C4 268 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 PnnO35691 725 aaKnown RBP12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Rgs9O54828 675 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Pald1P70261 859 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Gramd4Q8CB44 633 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Cys1Q8R4T1 145 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Senp2Q91ZX6 588 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ccdc182Q9D9C6 152 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Naa16Q9DBB4 864 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Mast3Q3U214 1321 aa12.71□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ccdc6D3YZP9 469 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Akr1b10G5E895 316 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Slc4a4O88343 1079 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 ClppO88696 272 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Fkbp1aP26883 108 aaKnown RBP12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Stim2P83093 746 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 LyarQ08288 388 aaKnown RBP12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Nab2Q61127 525 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Mea1Q64327 174 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Tmem59lQ7TNI2 337 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Sfr1Q8BP27 319 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Champ1Q8K327 802 aaKnown RBP12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Rbm43Q99J64 343 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Ftsj3Q9DBE9 838 aaKnown RBP12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Kcnh3Q9WVJ0 1095 aa12.71□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Gm43638A0A0J9YU36 694 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Pdia2D3Z6P0 527 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Chp1P61022 195 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Gm1604bQ3TRG0 118 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Mylk4Q5SUV5 386 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Utp14bQ6EJB6 756 aaKnown RBP12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Gimap8Q75N62 688 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Sept9Q80UG5 583 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Nop9Q8BMC4 636 aaKnown RBP12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Larp6Q8BN59 492 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 9230110C19RikQ8CC70 267 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 NemfQ8CCP0 1064 aaKnown RBP12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Ero1aQ8R180 464 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Srfbp1Q9CZ91 441 aaKnown RBP12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 ParvgQ9ERD8 331 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Cacna2d3Q9Z1L5 1091 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Shank3Q4ACU6 1730 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Metap2O08663 478 aaKnown RBP12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Mapkapk5O54992 473 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Meis3P97368 378 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Tmprss11aQ3UQ41 389 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Foxd4Q60688 444 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Ppp2r5aQ6PD03 486 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Rnf220Q6PDX6 566 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Hook2Q7TMK6 716 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Acnat2Q8BGG9 420 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Acbd3Q8BMP6 525 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Tmem39aQ9CYC3 486 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Mfap3lQ9D3X9 409 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 PapolbQ9WVP6 641 aa12.7□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Zc3h4Q6ZPZ3 1304 aaKnown RBP12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Znf536Q8K083 1302 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Tada2bD3Z4Z0 420 aaKnown RBP12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Cplx1P63040 134 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Plekhf1Q3TB82 279 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Stk38lQ7TSE6 464 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Prpf38bQ80SY5 542 aaKnown RBP12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Proser2Q8C5R2 471 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Ccdc65Q8VHI7 493 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 GakQ99KY4 1305 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Slurp2P0DP59 97 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 M6prP24668 278 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Sox5P35710 763 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Ube3cQ80U95 1083 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Rpa1Q8VEE4 623 aaKnown RBP12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Tab2Q99K90 693 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Toe1Q9D2E2 511 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Gja10Q9WUS4 505 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Irs4Q9Z0Y7 1216 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 4931408C20RikE9PWP9 1381 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Ces1hD3Z298 562 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 ChkbO55229 394 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 GabrdP22933 449 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Celf1P28659 486 aaKnown RBP12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Pla2g4eQ50L42 875 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Gucy2fQ5SDA5 1108 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Usp15Q8R5H1 981 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Dtnbp1Q91WZ8 352 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 CrebzfQ91ZR3 358 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Krt84Q99M73 603 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Foxo3Q9WVH4 672 aa12.69□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Gm28042B7ZCM9 1014 aa12.68□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Snai1Q02085 264 aa12.68□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Cyp24a1Q64441 514 aa12.68□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Cpa1Q7TPZ8 419 aa12.68□□□□□ -0.38
Sdc1-201ENSMUST00000020911 TdrkhQ80VL1 560 aa12.68□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Tpcn2Q8BWC0 731 aa12.68□□□□□ -0.38
Sdc1-201ENSMUST00000020911 Q8C6G1 249 aa12.68□□□□□ -0.38
Sdc1-201ENSMUST00000020911 4933428M09RikQ9D3X3 192 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms