RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	NUP120	P35729	1037 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	RIM11	P38615	370 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	GGC1	P38988	300 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	YJL049W	P47048	450 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	YJR149W	P47177	404 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	SHY1	P53266	389 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	FHN1	P53279	174 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	TAF12	Q03761	539 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	MTQ2	Q03920	221 aa	Predicted RBP	7.9	□□□□□ -1.14
TGA1	tA(UGC)A	ERF2	Q06551	359 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	YLR030W	Q07967	263 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	YOL019W	Q08157	551 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	ATG29	Q12092	213 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	RRP42	Q12277	265 aa	Predicted RBP	7.9	□□□□□ -1.14
TGA1	tA(UGC)A	SEC39	Q12745	709 aa		7.9	□□□□□ -1.14
TGA1	tA(UGC)A	GAL7	P08431	366 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	MSB1	P21339	1137 aa	Known RBP	7.89	□□□□□ -1.15
TGA1	tA(UGC)A	CLB1	P24868	471 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	PTP1	P25044	335 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	BUB3	P26449	341 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	MEI5	P32489	222 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	SKT5	P34226	696 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	SQT1	P35184	431 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	TAF14	P35189	244 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	EMC3	P36039	253 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	INM1	P38710	295 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	DHH1	P39517	506 aa	Known RBP	7.89	□□□□□ -1.15
TGA1	tA(UGC)A	EMP65	P40085	556 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	VRG4	P40107	337 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	ALR2	P43553	858 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	RCF2	P53721	224 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	NHP10	Q03435	203 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	GUP2	Q08929	609 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	YLR053C	Q12026	108 aa		7.89	□□□□□ -1.15
TGA1	tA(UGC)A	CHS5	Q12114	671 aa	Known RBP	7.89	□□□□□ -1.15
TGA1	tA(UGC)A	SPT3	P06844	337 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	RSR1	P13856	272 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	RPB4	P20433	221 aa	Predicted RBP	7.88	□□□□□ -1.15
TGA1	tA(UGC)A	YCR090C	P25654	182 aa	Known RBP	7.88	□□□□□ -1.15
TGA1	tA(UGC)A	RGA1	P39083	1007 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	YHB1	P39676	399 aa	Known RBP	7.88	□□□□□ -1.15
TGA1	tA(UGC)A	NDE1	P40215	560 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	AIF1	P52923	378 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	ERG26	P53199	349 aa	Known RBP	7.88	□□□□□ -1.15
TGA1	tA(UGC)A	IBD2	P53892	351 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	RMI1	Q02685	241 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	VHS1	Q03785	461 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	YMR155W	Q03795	547 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	HPT1	Q04178	221 aa	Known RBP	7.88	□□□□□ -1.15
TGA1	tA(UGC)A	YPR022C	Q12139	1133 aa		7.88	□□□□□ -1.15
TGA1	tA(UGC)A	MST1	P07236	462 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	TYR1	P20049	452 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	SFC1	P33303	322 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	SDH3	P33421	198 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	YKL100C	P34248	587 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	RMA1	P36001	430 aa	Known RBP	7.87	□□□□□ -1.15
TGA1	tA(UGC)A	RIM2	P38127	377 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	PHO89	P38361	574 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	YHL008C	P38750	627 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	GIC1	P38785	314 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	COA1	P40452	197 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	AXL1	P40851	1208 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	ALK1	P43633	760 aa	Known RBP	7.87	□□□□□ -1.15
TGA1	tA(UGC)A	YJR030C	P47101	745 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	MDM34	P53083	459 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	RRP45	Q05636	305 aa	Known RBP	7.87	□□□□□ -1.15
TGA1	tA(UGC)A	STE23	Q06010	1027 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	YDR056C	Q12025	205 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	LAG2	Q92325	660 aa		7.87	□□□□□ -1.15
TGA1	tA(UGC)A	AI3	P03877	415 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	CMP2	P14747	604 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	CRM1	P30822	1084 aa	Known RBP	7.86	□□□□□ -1.15
TGA1	tA(UGC)A	HOG1	P32485	435 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	ASK1	P35734	292 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	KKQ8	P36004	724 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	MUD2	P36084	527 aa	Known RBP	7.86	□□□□□ -1.15
TGA1	tA(UGC)A	YBR032W	P38223	100 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	YJL206C	P39529	758 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	MGS1	P40151	587 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	PFK26	P40433	827 aa	Known RBP	7.86	□□□□□ -1.15
TGA1	tA(UGC)A	SEC27	P41811	889 aa	Known RBP	7.86	□□□□□ -1.15
TGA1	tA(UGC)A	LIA1	P47120	325 aa	Known RBP	7.86	□□□□□ -1.15
TGA1	tA(UGC)A	ESF2	P53743	316 aa	Known RBP	7.86	□□□□□ -1.15
TGA1	tA(UGC)A	IST1	P53843	298 aa	Predicted RBP	7.86	□□□□□ -1.15
TGA1	tA(UGC)A	GIP3	Q03016	1276 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	RIF2	Q06208	395 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	IRC13	Q08630	104 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	YOR389W	Q08912	624 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	YPL278C	Q08990	100 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	HAL9	Q12180	1030 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	YOR114W	Q12219	294 aa		7.86	□□□□□ -1.15
TGA1	tA(UGC)A	CYR1	P08678	2026 aa	Known RBP	7.86	□□□□□ -1.15
TGA1	tA(UGC)A	GUK1	P15454	187 aa	Known RBP	7.85	□□□□□ -1.15
TGA1	tA(UGC)A	MCM5	P29496	775 aa	Known RBP	7.85	□□□□□ -1.15
TGA1	tA(UGC)A	HXT4	P32467	576 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	HXT6	P39003	570 aa	Known RBP	7.85	□□□□□ -1.15
TGA1	tA(UGC)A	HXT7	P39004	570 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	YER034W	P40022	185 aa	Known RBP	7.85	□□□□□ -1.15
TGA1	tA(UGC)A	YIL086C	P40503	102 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	PAN2	P53010	1115 aa	Predicted RBP	7.85	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms