RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR3, Length 194 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR3	snR3	SLK19	Q08581	821 aa	Known RBP	4.92	□□□□□ -1.62
snR3	snR3	SGT2	Q12118	346 aa	Known RBP	4.92	□□□□□ -1.62
snR3	snR3	LAS17	Q12446	633 aa		4.92	□□□□□ -1.62
snR3	snR3	ARG81	P05085	880 aa		4.91	□□□□□ -1.62
snR3	snR3	SPS4	P09937	338 aa		4.91	□□□□□ -1.62
snR3	snR3	RPL31B	P0C2H9	113 aa	Known RBP	4.91	□□□□□ -1.62
snR3	snR3	PCT1	P13259	424 aa		4.91	□□□□□ -1.62
snR3	snR3	CLN1	P20437	546 aa		4.91	□□□□□ -1.62
snR3	snR3	DBP3	P20447	523 aa	Known RBP	4.91	□□□□□ -1.62
snR3	snR3	BUD5	P25300	642 aa	Predicted RBP	4.91	□□□□□ -1.62
snR3	snR3	RAD14	P28519	371 aa		4.91	□□□□□ -1.62
snR3	snR3	VPS17	P32913	551 aa		4.91	□□□□□ -1.62
snR3	snR3	YBL055C	P34220	418 aa	Predicted RBP	4.91	□□□□□ -1.62
snR3	snR3	MRPL40	P36534	297 aa		4.91	□□□□□ -1.62
snR3	snR3	VPS41	P38959	992 aa		4.91	□□□□□ -1.62
snR3	snR3	SER3	P40054	469 aa		4.91	□□□□□ -1.62
snR3	snR3	NMA2	P53204	395 aa		4.91	□□□□□ -1.62
snR3	snR3	CAF130	P53280	1122 aa	Predicted RBP	4.91	□□□□□ -1.62
snR3	snR3	ATG4	P53867	494 aa		4.91	□□□□□ -1.62
snR3	snR3	VTC3	Q02725	835 aa		4.91	□□□□□ -1.62
snR3	snR3	TAP42	Q04372	366 aa		4.91	□□□□□ -1.62
snR3	snR3	YML053C	Q04978	212 aa		4.91	□□□□□ -1.62
snR3	snR3	ATG9	Q12142	997 aa		4.91	□□□□□ -1.62
snR3	snR3	PFK27	Q12471	397 aa	Predicted RBP	4.91	□□□□□ -1.62
snR3	snR3	RPS13	P05756	151 aa	Known RBP	4.9	□□□□□ -1.63
snR3	snR3	STE4	P18851	423 aa		4.9	□□□□□ -1.63
snR3	snR3	STE11	P23561	717 aa		4.9	□□□□□ -1.63
snR3	snR3	FAA1	P30624	700 aa	Known RBP	4.9	□□□□□ -1.63
snR3	snR3	NDI1	P32340	513 aa		4.9	□□□□□ -1.63
snR3	snR3	NUP133	P36161	1157 aa		4.9	□□□□□ -1.63
snR3	snR3	MMS4	P38257	691 aa		4.9	□□□□□ -1.63
snR3	snR3	KSP1	P38691	1029 aa	Known RBP	4.9	□□□□□ -1.63
snR3	snR3	CIN4	P39110	191 aa		4.9	□□□□□ -1.63
snR3	snR3	GIP4	P39732	760 aa		4.9	□□□□□ -1.63
snR3	snR3	MCM6	P53091	1017 aa	Known RBP	4.9	□□□□□ -1.63
snR3	snR3	RPN14	P53196	417 aa		4.9	□□□□□ -1.63
snR3	snR3	ALF1	P53904	254 aa		4.9	□□□□□ -1.63
snR3	snR3	EGD1	Q02642	157 aa	Known RBP	4.9	□□□□□ -1.63
snR3	snR3	TRS23	Q03784	219 aa		4.9	□□□□□ -1.63
snR3	snR3	RRB1	Q04225	511 aa	Known RBP	4.9	□□□□□ -1.63
snR3	snR3	RNH1	Q04740	348 aa		4.9	□□□□□ -1.63
snR3	snR3	SIL1	Q08199	421 aa		4.9	□□□□□ -1.63
snR3	snR3	APL5	Q08951	932 aa	Known RBP	4.9	□□□□□ -1.63
snR3	snR3	DFG16	Q99234	619 aa		4.9	□□□□□ -1.63
snR3	snR3	WHI2	P12611	486 aa		4.89	□□□□□ -1.63
snR3	snR3	UBA1	P22515	1024 aa	Known RBP	4.89	□□□□□ -1.63
snR3	snR3	CRM1	P30822	1084 aa	Known RBP	4.89	□□□□□ -1.63
snR3	snR3	LST4	P34239	828 aa		4.89	□□□□□ -1.63
snR3	snR3	ARA1	P38115	344 aa		4.89	□□□□□ -1.63
snR3	snR3	PFF1	P38244	976 aa		4.89	□□□□□ -1.63
snR3	snR3	MLH1	P38920	769 aa		4.89	□□□□□ -1.63
snR3	snR3	SMC2	P38989	1170 aa	Known RBP	4.89	□□□□□ -1.63
snR3	snR3	AIP1	P46680	615 aa	Known RBP	4.89	□□□□□ -1.63
snR3	snR3	RPA34	P47006	233 aa	Predicted RBP	4.89	□□□□□ -1.63
snR3	snR3	TOM22	P49334	152 aa		4.89	□□□□□ -1.63
snR3	snR3	COP1	P53622	1201 aa	Known RBP	4.89	□□□□□ -1.63
snR3	snR3	YNL143C	P53908	130 aa		4.89	□□□□□ -1.63
snR3	snR3	TOF2	Q02208	771 aa		4.89	□□□□□ -1.63
snR3	snR3	RRN5	Q02983	363 aa		4.89	□□□□□ -1.63
snR3	snR3	PLM2	Q04383	521 aa		4.89	□□□□□ -1.63
snR3	snR3	MTR10	Q99189	972 aa		4.89	□□□□□ -1.63
snR3	snR3	GPH1	P06738	902 aa	Known RBP	4.88	□□□□□ -1.63
snR3	snR3	PDE2	P06776	526 aa		4.88	□□□□□ -1.63
snR3	snR3	PUT4	P15380	627 aa		4.88	□□□□□ -1.63
snR3	snR3	YIM1	P28625	365 aa		4.88	□□□□□ -1.63
snR3	snR3	MCM4	P30665	933 aa	Known RBP	4.88	□□□□□ -1.63
snR3	snR3	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
snR3	snR3	GDA1	P32621	518 aa		4.88	□□□□□ -1.63
snR3	snR3	MIC60	P36112	540 aa		4.88	□□□□□ -1.63
snR3	snR3	YKR073C	P36153	106 aa		4.88	□□□□□ -1.63
snR3	snR3	TSC10	P38342	320 aa		4.88	□□□□□ -1.63
snR3	snR3	RIX1	P38883	763 aa	Predicted RBP	4.88	□□□□□ -1.63
snR3	snR3	YFR020W	P43600	232 aa		4.88	□□□□□ -1.63
snR3	snR3	EFM3	P47163	339 aa		4.88	□□□□□ -1.63
snR3	snR3	RMD9	P53140	646 aa	Known RBP	4.88	□□□□□ -1.63
snR3	snR3	ERG26	P53199	349 aa	Known RBP	4.88	□□□□□ -1.63
snR3	snR3	COQ6	P53318	479 aa		4.88	□□□□□ -1.63
snR3	snR3	PRM1	P53835	661 aa		4.88	□□□□□ -1.63
snR3	snR3	CWC21	Q03375	135 aa	Known RBP	4.88	□□□□□ -1.63
snR3	snR3	YMR160W	Q03823	816 aa		4.88	□□□□□ -1.63
snR3	snR3	DCS1	Q06151	350 aa		4.88	□□□□□ -1.63
snR3	snR3	TEN1	Q07921	160 aa		4.88	□□□□□ -1.63
snR3	snR3	RHO2	P06781	192 aa		4.87	□□□□□ -1.63
snR3	snR3	GCD2	P12754	651 aa	Predicted RBP	4.87	□□□□□ -1.63
snR3	snR3	HOM2	P13663	365 aa	Known RBP	4.87	□□□□□ -1.63
snR3	snR3	ERG4	P25340	473 aa		4.87	□□□□□ -1.63
snR3	snR3	MRPL9	P31334	269 aa		4.87	□□□□□ -1.63
snR3	snR3	ADE17	P38009	592 aa	Known RBP	4.87	□□□□□ -1.63
snR3	snR3	RPL32	P38061	130 aa	Known RBP	4.87	□□□□□ -1.63
snR3	snR3	ZTA1	P38230	334 aa	Known RBP	4.87	□□□□□ -1.63
snR3	snR3	IMD2	P38697	523 aa	Known RBP	4.87	□□□□□ -1.63
snR3	snR3	DBP8	P38719	431 aa		4.87	□□□□□ -1.63
snR3	snR3	FAD1	P38913	306 aa		4.87	□□□□□ -1.63
snR3	snR3	SAP1	P39955	897 aa	Known RBP	4.87	□□□□□ -1.63
snR3	snR3	ARG2	P40360	574 aa		4.87	□□□□□ -1.63
snR3	snR3	VHS2	P40463	436 aa		4.87	□□□□□ -1.63
snR3	snR3	ECM27	P47144	725 aa		4.87	□□□□□ -1.63
snR3	snR3	MNN10	P50108	393 aa	Known RBP	4.87	□□□□□ -1.63
snR3	snR3	RNT1	Q02555	471 aa		4.87	□□□□□ -1.63
snR3	snR3	YDR179W-A	Q03983	463 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms