RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	ECM25	P32525	599 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	NUP120	P35729	1037 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	PHO89	P38361	574 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	PCL5	P38794	229 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	YHR218W	P38899	603 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	MAM33	P40513	266 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	ASK10	P48361	1146 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	ECM11	Q04110	302 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	RSC2	Q06488	889 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	MLH3	Q12083	715 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	BBP1	Q12365	385 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	RRD2	Q12461	358 aa		4.98	□□□□□ -1.61
GDB1	YPR184W	ART10	P18634	518 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	MRPS28	P21771	286 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	ARE1	P25628	610 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	TMT1	P32643	299 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	TDP1	P38319	544 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	YHR112C	P38716	378 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	SWD1	P39706	426 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	RSP5	P39940	809 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	YEN1	P40028	759 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	FIG4	P42837	879 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	AIM14	P53109	570 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	ATF2	P53296	535 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	TIM13	P53299	105 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	DCP2	P53550	970 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	ELP3	Q02908	557 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	SNZ1	Q03148	297 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	APC4	Q04601	652 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	YLR326W	Q06170	240 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	NCA2	Q12374	616 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	FLO11	P08640	1367 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	PEX1	P24004	1043 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	FSH1	P38777	243 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	RCY1	P39531	840 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	OSW5	P40219	148 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	ASG1	P40467	964 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	MPH1	P40562	993 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	ASG7	P46993	209 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	MTC3	P53077	123 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	ACS1	Q01574	713 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	TDA1	Q03533	586 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	HBT1	Q07653	1046 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	CCP1	P00431	361 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	MPH2	P0CD99	609 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	TAL1	P15019	335 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	CCA1	P21269	546 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	KIN82	P25341	720 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	SRP101	P32916	621 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	SLC1	P33333	303 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	ECM4	P36156	370 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	ASC1	P38011	319 aa	Known RBP	4.97	□□□□□ -1.61
GDB1	YPR184W	YEL023C	P39992	682 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	NDE1	P40215	560 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	NUS1	Q12063	375 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	YOR022C	Q12204	715 aa		4.97	□□□□□ -1.61
GDB1	YPR184W	SUC2	P00724	532 aa		4.96	□□□□□ -1.61
GDB1	YPR184W	SPE1	P08432	466 aa		4.96	□□□□□ -1.61
GDB1	YPR184W	BET2	P20133	325 aa		4.96	□□□□□ -1.61
GDB1	YPR184W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.61	not detected
GDB1	YPR184W	CIN4	P39110	191 aa		4.96	□□□□□ -1.61
GDB1	YPR184W	YFL066C	P43538	392 aa		4.96	□□□□□ -1.61
GDB1	YPR184W	DAN4	P47179	1161 aa		4.96	□□□□□ -1.61
GDB1	YPR184W	MNP1	P53163	194 aa	Predicted RBP	4.96	□□□□□ -1.61
GDB1	YPR184W	YKL068W-A	Q3E826	78 aa		4.96	□□□□□ -1.61
GDB1	YPR184W	IZH4	Q99393	312 aa		4.96	□□□□□ -1.61
GDB1	YPR184W	MAG1	P22134	296 aa	Known RBP	4.96	□□□□□ -1.62
GDB1	YPR184W	ATG14	P38270	344 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	SUM1	P46676	1062 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	FIN1	Q03898	291 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	NUT2	Q06213	157 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	SWA2	Q06677	668 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	YOR238W	Q08634	303 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	YDR262W	Q12331	272 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	GIS3	Q12418	502 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	RPL24A	P04449	155 aa	Known RBP	4.96	□□□□□ -1.62
GDB1	YPR184W	ERP5	P38819	212 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	ATG7	P38862	630 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	MNN1	P39106	762 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	MBP1	P39678	833 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	MRX1	P40050	688 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	SDP1	P40479	209 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	SET4	P42948	560 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	HSV2	P50079	448 aa	Predicted RBP	4.96	□□□□□ -1.62
GDB1	YPR184W	IBD2	P53892	351 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	RPN4	Q03465	531 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	ARP10	Q04549	284 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	HRD3	Q05787	833 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	TCO89	Q08921	799 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	YLR125W	Q12138	136 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	YPT6	Q99260	215 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	AMS1	P22855	1083 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	CIN8	P27895	1000 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	VMA8	P32610	256 aa	Known RBP	4.96	□□□□□ -1.62
GDB1	YPR184W	SOF1	P33750	489 aa	Known RBP	4.96	□□□□□ -1.62
GDB1	YPR184W	MCM7	P38132	845 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	SLM1	P40485	686 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	RRN7	P40992	514 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	COS10	P52924	374 aa		4.96	□□□□□ -1.62
GDB1	YPR184W	GET1	P53192	235 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms