RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	SEC65	P29478	273 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	DAL3	P32459	195 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	GCD7	P32502	381 aa	Predicted RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	TGL1	P34163	548 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	RCK2	P38623	610 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	FMO1	P38866	432 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	SAH1	P39954	449 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	QRI1	P43123	477 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	PTK2	P47116	818 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	SLI1	P53304	468 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	DIA1	P54005	336 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	CIA1	Q05583	330 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	SKG3	Q06315	1026 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	DXO1	Q06349	442 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	GPN2	Q08726	347 aa	Predicted RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	YPR027C	Q12079	277 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	DCS2	Q12123	353 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	SNF8	Q12483	233 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	CTF3	Q12748	733 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	RPL4A	P10664	362 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	APE1	P14904	514 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	TUP1	P16649	713 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	CBF1	P17106	351 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	COQ1	P18900	473 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	OLE1	P21147	510 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	NFS1	P25374	497 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	RHB1	P25378	209 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	MCM4	P30665	933 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	GCD11	P32481	527 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	NGR1	P32831	672 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	GSP1	P32835	219 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	GSP2	P32836	220 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	SUL1	P38359	859 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	CKB2	P38930	258 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	MNN9	P39107	395 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	FHL1	P39521	936 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	AFG3	P39925	761 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	JHD1	P40034	492 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	GZF3	P42944	551 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	AGP3	P43548	558 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
PXA1	YPL147W	BNA2	P47125	453 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	ILM1	P47155	203 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	RPL4B	P49626	362 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	MET13	P53128	600 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	VOA1	P53262	265 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	ARE2	P53629	642 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	ORC3	P54790	616 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	YMR210W	Q03649	449 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	CAB1	Q04430	367 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	DAL4	Q04895	635 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	SPO77	Q06134	477 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	SYT1	Q06836	1226 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	FMP45	Q07651	309 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	TMA46	Q12000	345 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	NCR1	Q12200	1170 aa		4.85	□□□□□ -1.63
PXA1	YPL147W	RPN5	Q12250	445 aa	Known RBP	4.85	□□□□□ -1.63
PXA1	YPL147W	YER152C	P10356	443 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	DBR1	P24309	405 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	APL1	P27351	700 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	IDH2	P28241	369 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	ARO4	P32449	370 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	ISF1	P32488	338 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	HEL1	P36113	551 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	AMN1	P38285	549 aa	Predicted RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	IMD4	P50094	524 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	ALT2	P52892	507 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	GPD1	Q00055	391 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	CTF19	Q02732	369 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	MRP51	Q02950	344 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	DUS4	Q06063	367 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	YPR127W	Q06494	345 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	CSC1	Q06538	782 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	CDD1	Q06549	142 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	BTS1	Q12051	335 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	SNU23	Q12368	194 aa	Predicted RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	LEU4	P06208	619 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	CDC24	P11433	854 aa	Predicted RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	AGP1	P25376	633 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	SAC6	P32599	642 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	SLI15	P38283	698 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	KSP1	P38691	1029 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	LSM12	P38828	187 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	PZF1	P39933	429 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	YAT2	P40017	923 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	PSF2	P40359	213 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	CHS6	P40955	746 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	SWF1	Q04629	336 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	ROY1	Q04847	553 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	HDA2	Q06629	674 aa		4.84	□□□□□ -1.63
PXA1	YPL147W	GET3	Q12154	354 aa	Known RBP	4.84	□□□□□ -1.63
PXA1	YPL147W	PHO5	P00635	467 aa		4.83	□□□□□ -1.64
PXA1	YPL147W	TUB2	P02557	457 aa	Known RBP	4.83	□□□□□ -1.64
PXA1	YPL147W	CIN8	P27895	1000 aa		4.83	□□□□□ -1.64
PXA1	YPL147W	SER1	P33330	395 aa	Known RBP	4.83	□□□□□ -1.64
PXA1	YPL147W	SNU114	P36048	1008 aa	Known RBP	4.83	□□□□□ -1.64
PXA1	YPL147W	MRPL36	P36531	177 aa		4.83	□□□□□ -1.64
PXA1	YPL147W	NPA3	P47122	385 aa		4.83	□□□□□ -1.64
PXA1	YPL147W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
PXA1	YPL147W	RPN9	Q04062	393 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms