RNA–Protein interactions for RNA: YPL074W

YTA6, Transcript of Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family, yeast

Gene YTA6, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTA6	YPL074W	YIR035C	P40579	254 aa		4.81	□□□□□ -1.64
YTA6	YPL074W	YJR056C	P47115	236 aa		4.81	□□□□□ -1.64
YTA6	YPL074W	TAF4	P50105	388 aa		4.81	□□□□□ -1.64
YTA6	YPL074W	NBP1	P52919	319 aa	Predicted RBP	4.81	□□□□□ -1.64
YTA6	YPL074W	SHR3	Q02774	210 aa		4.81	□□□□□ -1.64
YTA6	YPL074W	YML037C	Q03703	340 aa		4.81	□□□□□ -1.64
YTA6	YPL074W	TDA5	Q06417	326 aa	Known RBP	4.81	□□□□□ -1.64
YTA6	YPL074W	CDA2	Q06703	312 aa		4.81	□□□□□ -1.64
YTA6	YPL074W	GRS2	Q06817	618 aa		4.81	□□□□□ -1.64
YTA6	YPL074W	THI20	Q08224	551 aa		4.81	□□□□□ -1.64
YTA6	YPL074W	TMA7	Q3E764	64 aa	Known RBP	4.81	□□□□□ -1.64
YTA6	YPL074W	RPC40	P07703	335 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	RPS18A	P0CX55	146 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	RPS18B	P0CX56	146 aa	Predicted RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	MRP1	P10662	321 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	RSA4	P25382	515 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	YIM1	P28625	365 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	VMA5	P31412	392 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	MSS1	P32559	526 aa	Predicted RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	SIP2	P34164	415 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	CBT1	P36038	271 aa	Predicted RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	MIT1	P40002	666 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	RGI2	P40188	164 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	GNA1	P43577	159 aa	Predicted RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	LYS20	P48570	428 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	SPT20	P50875	604 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	PMT5	P52867	743 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	MLC1	P53141	149 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YGR127W	P53275	312 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YTP1	P53584	459 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	ECM23	Q02710	187 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	SEN54	Q02825	467 aa	Predicted RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	YDR131C	Q03899	556 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	CSN9	Q03981	162 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YET2	Q04210	160 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	TDA9	Q04545	1251 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YLR297W	Q05899	129 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	CSC1	Q06538	782 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	RRI2	Q12348	645 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YFR010W-A	P0C5N0	62 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	SPO16	P17122	198 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	APA2	P22108	325 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	FPS1	P23900	669 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	MCM5	P29496	775 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	HYM1	P32464	399 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	SCM4	P32564	187 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	CYS4	P32582	507 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	GDH2	P33327	1092 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	SSH1	P38353	490 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	YHR054C	P38780	354 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	RSC30	P38781	883 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	DUN1	P39009	513 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	PLB1	P39105	664 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	KRE29	P40026	464 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	NDE1	P40215	560 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	MNN5	P46982	586 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	IRC18	P47056	224 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	ARO8	P53090	500 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	TEP1	P53916	434 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	DAK1	P54838	584 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	EEB1	Q02891	456 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YMD8	Q03697	442 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	SSL1	Q04673	461 aa	Predicted RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	GAD1	Q04792	585 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	CIA1	Q05583	330 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	REH1	Q06709	432 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	ESC8	Q08119	714 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YPL216W	Q08964	1102 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	SLF1	Q12034	447 aa	Known RBP	4.8	□□□□□ -1.64
YTA6	YPL074W	MDM32	Q12171	622 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YOL107W	Q12239	342 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	YBL029C-A	Q3E756	94 aa		4.8	□□□□□ -1.64
YTA6	YPL074W	ATP2	P00830	511 aa	Known RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	CHS1	P08004	1131 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	CBF1	P17106	351 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	TRX1	P22217	103 aa	Known RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	DAL3	P32459	195 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	SIP1	P32578	815 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	BEM3	P32873	1128 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	SPO23	P33757	523 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	PTC1	P35182	281 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	SRP102	P36057	244 aa	Predicted RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
YTA6	YPL074W	MAL32	P38158	584 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	GUA1	P38625	525 aa	Known RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	PAN5	P38787	379 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	NEO1	P40527	1151 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	DUG1	P43616	481 aa	Known RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	YJL043W	P47053	257 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	JHD2	P47156	728 aa	Predicted RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	ORC5	P50874	479 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	DOC1	P53068	250 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	NOP19	P53317	196 aa	Predicted RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	MAL12	P53341	584 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	SPC98	P53540	846 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	NOG2	P53742	486 aa	Known RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	YMR099C	Q03161	297 aa	Known RBP	4.79	□□□□□ -1.64
YTA6	YPL074W	TRM82	Q03774	444 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	RCO1	Q04779	684 aa		4.79	□□□□□ -1.64
YTA6	YPL074W	BOP2	Q06150	570 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms