RNA–Protein interactions for RNA: YOR348C

PUT4, Transcript of Proline permease, yeast

Gene PUT4, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUT4	YOR348C	HXK2	P04807	486 aa	Known RBP	13.93	□□□□□ -0.18
PUT4	YOR348C	CLB2	P24869	491 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	PUP3	P25451	205 aa	Known RBP	13.93	□□□□□ -0.18
PUT4	YOR348C	UBC8	P28263	218 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	MRPL9	P31334	269 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	ALY1	P36117	915 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	13.93	□□□□□ -0.18	not detected
PUT4	YOR348C	PFK27	Q12471	397 aa	Predicted RBP	13.93	□□□□□ -0.18
PUT4	YOR348C	HTA2	P04912	132 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	KSS1	P14681	368 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	CAD1	P24813	409 aa	Known RBP	13.93	□□□□□ -0.18
PUT4	YOR348C	CLB3	P24870	427 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	PGS1	P25578	521 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	LRG1	P35688	1017 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	SPC34	P36131	295 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	MRPL40	P36534	297 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	GOS1	P38736	223 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	RBG1	P39729	369 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	MSS2	P40990	351 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	YNL143C	P53908	130 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	SED5	Q01590	340 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	SPR6	Q01684	191 aa		13.93	□□□□□ -0.18
PUT4	YOR348C	SPT3	P06844	337 aa		13.92	□□□□□ -0.18
PUT4	YOR348C	RAP1	P11938	827 aa		13.92	□□□□□ -0.18
PUT4	YOR348C	PEX3	P28795	441 aa		13.92	□□□□□ -0.18
PUT4	YOR348C	THO1	P40040	218 aa	Known RBP	13.92	□□□□□ -0.18
PUT4	YOR348C	AVT6	P40074	448 aa		13.92	□□□□□ -0.18
PUT4	YOR348C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	13.92	□□□□□ -0.18	not detected
PUT4	YOR348C	GTO1	P48239	356 aa		13.92	□□□□□ -0.18
PUT4	YOR348C	YDR124W	Q04608	324 aa		13.92	□□□□□ -0.18
PUT4	YOR348C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	13.92	□□□□□ -0.18	not detected
PUT4	YOR348C	PEX11	Q12462	236 aa		13.92	□□□□□ -0.18
PUT4	YOR348C	SST2	P11972	698 aa	Known RBP	13.91	□□□□□ -0.18
PUT4	YOR348C	UTP11	P34247	250 aa	Predicted RBP	13.91	□□□□□ -0.18
PUT4	YOR348C	RGI1	P40043	161 aa	Predicted RBP	13.91	□□□□□ -0.18
PUT4	YOR348C	PEX13	P80667	386 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	FMP42	Q04991	504 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	MCM21	Q06675	368 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	RSA1	Q08932	381 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	DST1	P07273	309 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	MRPL32	P25348	183 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	OCA4	P25366	362 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	SCD5	P34758	872 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	THI80	P35202	319 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	RFS1	P38234	210 aa	Known RBP	13.91	□□□□□ -0.18
PUT4	YOR348C	MTW1	P39731	289 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	PAN6	P40459	309 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	MON1	P53129	644 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	YGR054W	P53235	642 aa	Known RBP	13.91	□□□□□ -0.18
PUT4	YOR348C	HXT15	P54854	567 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	NDL1	Q06568	189 aa		13.91	□□□□□ -0.18
PUT4	YOR348C	RPS9A	O13516	197 aa	Known RBP	13.9	□□□□□ -0.18
PUT4	YOR348C	RPS4A	P0CX35	261 aa	Known RBP	13.9	□□□□□ -0.18
PUT4	YOR348C	RPS4B	P0CX36	261 aa	Known RBP	13.9	□□□□□ -0.18
PUT4	YOR348C	SSZ1	P38788	538 aa	Known RBP	13.9	□□□□□ -0.18
PUT4	YOR348C	BTT1	P40314	149 aa	Predicted RBP	13.9	□□□□□ -0.18
PUT4	YOR348C	YMR010W	Q03687	405 aa		13.9	□□□□□ -0.18
PUT4	YOR348C	NTG1	P31378	399 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	AYR1	P40471	297 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	IRR1	P40541	1150 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	SIP4	P46954	829 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	SSL1	Q04673	461 aa	Predicted RBP	13.89	□□□□□ -0.19
PUT4	YOR348C	RPN6	Q12377	434 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	YOL159C-A	Q3E769	90 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	SGE1	P33335	543 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	FES1	P38260	290 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	MEP2	P41948	499 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	YFL052W	P43551	465 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	RBL2	P48606	106 aa	Known RBP	13.89	□□□□□ -0.19
PUT4	YOR348C	EFR3	Q03653	782 aa	Known RBP	13.89	□□□□□ -0.19
PUT4	YOR348C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	13.89	□□□□□ -0.19	not detected
PUT4	YOR348C	GYP1	Q08484	637 aa		13.89	□□□□□ -0.19
PUT4	YOR348C	RPN8	Q08723	338 aa	Known RBP	13.89	□□□□□ -0.19
PUT4	YOR348C	RAD7	P06779	565 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	ARP2	P32381	391 aa	Known RBP	13.88	□□□□□ -0.19
PUT4	YOR348C	APE2	P32454	952 aa	Known RBP	13.88	□□□□□ -0.19
PUT4	YOR348C	CDC5	P32562	705 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	PHO11	P35842	467 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	MAE1	P36013	669 aa	Known RBP	13.88	□□□□□ -0.19
PUT4	YOR348C	STB6	P36085	766 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	POA1	P38218	177 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	PHO12	P38693	467 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	SRL4	Q03085	281 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	IOC2	Q12072	812 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	SRF1	Q12516	437 aa		13.88	□□□□□ -0.19
PUT4	YOR348C	SDH2	P21801	266 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	PDE1	P22434	369 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	RIB7	P33312	244 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	IME4	P41833	600 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	YNR068C	P53754	272 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	IPI3	P53877	555 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	RSN1	Q03516	953 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	ECM11	Q04110	302 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	IRC10	Q08118	586 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	RAS2	P01120	322 aa	Known RBP	13.87	□□□□□ -0.19
PUT4	YOR348C	CBS2	P14905	389 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	RPA14	P50106	137 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	YKR005C	Q02203	525 aa		13.87	□□□□□ -0.19
PUT4	YOR348C	RTN1	Q04947	295 aa	Known RBP	13.87	□□□□□ -0.19
PUT4	YOR348C	YPQ1	Q12010	308 aa		13.87	□□□□□ -0.19

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms