RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeast

Gene CPR8, Length 927 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPR8	YNR028W	YML002W	P0CF17	737 aa		4.08	□□□□□ -1.76
CPR8	YNR028W	RPS2	P25443	254 aa	Known RBP	4.08	□□□□□ -1.76
CPR8	YNR028W	UBP11	P36026	717 aa		4.08	□□□□□ -1.76
CPR8	YNR028W	APT1	P49435	187 aa	Known RBP	4.08	□□□□□ -1.76
CPR8	YNR028W	SVL3	Q03088	825 aa	Known RBP	4.08	□□□□□ -1.76
CPR8	YNR028W	NGL3	Q03210	505 aa		4.08	□□□□□ -1.76
CPR8	YNR028W	FMP40	Q08968	688 aa	Predicted RBP	4.08	□□□□□ -1.76
CPR8	YNR028W	PHO2	P07269	559 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	PDA1	P16387	420 aa	Known RBP	4.07	□□□□□ -1.76
CPR8	YNR028W	SAN1	P22470	610 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	RPN12	P32496	274 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	VPS17	P32913	551 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	YNK1	P36010	153 aa	Known RBP	4.07	□□□□□ -1.76
CPR8	YNR028W	NOP16	P40007	231 aa	Known RBP	4.07	□□□□□ -1.76
CPR8	YNR028W	SNG1	P46950	547 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	MPP10	P47083	593 aa	Known RBP	4.07	□□□□□ -1.76
CPR8	YNR028W	SAM50	P53969	484 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	MSC1	Q03104	513 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	RBA50	Q04418	439 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	COG4	Q06096	861 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	CDC45	Q08032	650 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	SDH5	Q08230	162 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	NMD4	Q12129	218 aa		4.07	□□□□□ -1.76
CPR8	YNR028W	SEM1	O94742	89 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	SEC53	P07283	254 aa	Known RBP	4.06	□□□□□ -1.76
CPR8	YNR028W	AAC3	P18238	307 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	GFD2	P25370	566 aa	Known RBP	4.06	□□□□□ -1.76
CPR8	YNR028W	YKL023W	P36103	277 aa	Known RBP	4.06	□□□□□ -1.76
CPR8	YNR028W	FLC2	P39719	783 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	YTA12	P40341	825 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	TMA108	P40462	946 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	YGR126W	P53274	230 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	RHO4	Q00246	291 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	SHR3	Q02774	210 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	GLO2	Q05584	274 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	YTH1	Q06102	208 aa	Predicted RBP	4.06	□□□□□ -1.76
CPR8	YNR028W	THI20	Q08224	551 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	YMR230W-A	Q3E7B5	62 aa		4.06	□□□□□ -1.76
CPR8	YNR028W	PEP5	P12868	1029 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	EST1	P17214	699 aa	Predicted RBP	4.05	□□□□□ -1.76
CPR8	YNR028W	SUI2	P20459	304 aa	Known RBP	4.05	□□□□□ -1.76
CPR8	YNR028W	SEC62	P21825	274 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	SGF29	P25554	259 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	PRO3	P32263	286 aa	Known RBP	4.05	□□□□□ -1.76
CPR8	YNR028W	ECM15	P35195	104 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	CIN4	P39110	191 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	IKS1	P47042	667 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	DSD1	P53095	428 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	YDL057W	Q07379	328 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	YEH1	Q07804	573 aa		4.05	□□□□□ -1.76
CPR8	YNR028W	SGS1	P35187	1447 aa		4.04	□□□□□ -1.76
CPR8	YNR028W	MRP13	P12686	339 aa		4.04	□□□□□ -1.76
CPR8	YNR028W	RGT1	P32862	1170 aa		4.04	□□□□□ -1.76
CPR8	YNR028W	MPE1	P35728	441 aa	Known RBP	4.04	□□□□□ -1.76
CPR8	YNR028W	NOP4	P37838	685 aa	Known RBP	4.04	□□□□□ -1.76
CPR8	YNR028W	CCT6	P39079	546 aa		4.04	□□□□□ -1.76
CPR8	YNR028W	UPF3	P48412	387 aa	Known RBP	4.04	□□□□□ -1.76
CPR8	YNR028W	VID30	P53076	958 aa		4.04	□□□□□ -1.76
CPR8	YNR028W	BUD32	P53323	261 aa		4.04	□□□□□ -1.76
CPR8	YNR028W	IPI3	P53877	555 aa		4.04	□□□□□ -1.76
CPR8	YNR028W	YPT6	Q99260	215 aa		4.04	□□□□□ -1.76
CPR8	YNR028W	MRS3	P10566	314 aa		4.03	□□□□□ -1.76
CPR8	YNR028W	ART10	P18634	518 aa	Known RBP	4.03	□□□□□ -1.76
CPR8	YNR028W	SGV1	P23293	657 aa	Known RBP	4.03	□□□□□ -1.76
CPR8	YNR028W	TIF3	P34167	436 aa	Known RBP	4.03	□□□□□ -1.76
CPR8	YNR028W	SEF1	P34228	1148 aa		4.03	□□□□□ -1.76
CPR8	YNR028W	ALG5	P40350	334 aa		4.03	□□□□□ -1.76
CPR8	YNR028W	YMR087W	Q04299	284 aa		4.03	□□□□□ -1.76
CPR8	YNR028W	RTT103	Q05543	409 aa		4.03	□□□□□ -1.76
CPR8	YNR028W	RCN2	Q12044	265 aa		4.03	□□□□□ -1.76
CPR8	YNR028W	APE1	P14904	514 aa		4.02	□□□□□ -1.77
CPR8	YNR028W	EBP2	P36049	427 aa	Known RBP	4.02	□□□□□ -1.77
CPR8	YNR028W	JNM1	P36224	373 aa		4.02	□□□□□ -1.77
CPR8	YNR028W	DHH1	P39517	506 aa	Known RBP	4.02	□□□□□ -1.77
CPR8	YNR028W	CSM2	P40465	213 aa		4.02	□□□□□ -1.77
CPR8	YNR028W	ALT2	P52892	507 aa		4.02	□□□□□ -1.77
CPR8	YNR028W	RLP24	Q07915	199 aa	Known RBP	4.02	□□□□□ -1.77
CPR8	YNR028W	CTI6	Q08923	506 aa		4.02	□□□□□ -1.77
CPR8	YNR028W	NCE102	Q12207	173 aa	RIP-Chip data	4.02	□□□□□ -1.77	not detected
CPR8	YNR028W	PEP3	P27801	918 aa		4.01	□□□□□ -1.77
CPR8	YNR028W	SIP2	P34164	415 aa	Known RBP	4.01	□□□□□ -1.77
CPR8	YNR028W	OSH3	P38713	996 aa	Known RBP	4.01	□□□□□ -1.77
CPR8	YNR028W	YHR210C	P38893	341 aa		4.01	□□□□□ -1.77
CPR8	YNR028W	YJR154W	P47181	346 aa		4.01	□□□□□ -1.77
CPR8	YNR028W	MRX6	P48564	524 aa		4.01	□□□□□ -1.77
CPR8	YNR028W	RPM2	Q02773	1202 aa		4.01	□□□□□ -1.77
CPR8	YNR028W	ERP4	Q12450	207 aa		4.01	□□□□□ -1.77
CPR8	YNR028W	YJR112W-A	Q3E743	109 aa		4.01	□□□□□ -1.77
CPR8	YNR028W	HSH49	Q99181	213 aa	Predicted RBP	4.01	□□□□□ -1.77
CPR8	YNR028W	NDC1	P32500	655 aa		4	□□□□□ -1.77
CPR8	YNR028W	PTR2	P32901	601 aa		4	□□□□□ -1.77
CPR8	YNR028W	REG2	P38232	338 aa		4	□□□□□ -1.77
CPR8	YNR028W	MDM31	P38880	579 aa		4	□□□□□ -1.77
CPR8	YNR028W	VPS52	P39904	641 aa		4	□□□□□ -1.77
CPR8	YNR028W	IMD4	P50094	524 aa	Known RBP	4	□□□□□ -1.77
CPR8	YNR028W	HCR1	Q05775	265 aa	Known RBP	4	□□□□□ -1.77
CPR8	YNR028W	YOR365C	Q08844	703 aa		4	□□□□□ -1.77
CPR8	YNR028W	PPT2	Q12036	173 aa		4	□□□□□ -1.77
CPR8	YNR028W	PEP4	P07267	405 aa	Known RBP	3.99	□□□□□ -1.77
CPR8	YNR028W	CBS1	P14066	229 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms