RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W ART10P18634 518 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W URA4P20051 364 aa3.88□□□□□ -1.79
VPS27YNR006W CLN1P20437 546 aa3.88□□□□□ -1.79
VPS27YNR006W UBA1P22515 1024 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W FUB1P25659 250 aa3.88□□□□□ -1.79
VPS27YNR006W SNU114P36048 1008 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W PXL1P36166 706 aa3.88□□□□□ -1.79
VPS27YNR006W UIP3P39547 235 aa3.88□□□□□ -1.79
VPS27YNR006W EPL1P43572 832 aa3.88□□□□□ -1.79
VPS27YNR006W COS5P47187 383 aa3.88□□□□□ -1.79
VPS27YNR006W NUP84P52891 726 aa3.88□□□□□ -1.79
VPS27YNR006W YGL138CP53122 345 aa3.88□□□□□ -1.79
VPS27YNR006W DCP2P53550 970 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W BUD17P53727 317 aa3.88□□□□□ -1.79
VPS27YNR006W MFM1Q02783 413 aa3.88□□□□□ -1.79
VPS27YNR006W UBP16Q02863 499 aa3.88□□□□□ -1.79
VPS27YNR006W ECM18Q04623 453 aa3.88□□□□□ -1.79
VPS27YNR006W HBT1Q07653 1046 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W COS7Q07788 383 aa3.88□□□□□ -1.79
VPS27YNR006W AIM39Q08223 395 aa3.88□□□□□ -1.79
VPS27YNR006W APL5Q08951 932 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W INP53Q12271 1107 aa3.88□□□□□ -1.79
VPS27YNR006W ALG7P07286 448 aa3.87□□□□□ -1.79
VPS27YNR006W SPO7P18410 259 aa3.87□□□□□ -1.79
VPS27YNR006W EBP2P36049 427 aaKnown RBP3.87□□□□□ -1.79
VPS27YNR006W NUP133P36161 1157 aa3.87□□□□□ -1.79
VPS27YNR006W GDT1P38301 280 aaPredicted RBP3.87□□□□□ -1.79
VPS27YNR006W LNP1P38878 278 aa3.87□□□□□ -1.79
VPS27YNR006W FAD1P38913 306 aa3.87□□□□□ -1.79
VPS27YNR006W ELO1P39540 310 aa3.87□□□□□ -1.79
VPS27YNR006W FUN12P39730 1002 aaKnown RBP3.87□□□□□ -1.79
VPS27YNR006W ECM10P39987 644 aa3.87□□□□□ -1.79
VPS27YNR006W RPN11P43588 306 aaKnown RBP3.87□□□□□ -1.79
VPS27YNR006W YIP4P53093 235 aa3.87□□□□□ -1.79
VPS27YNR006W YNL144CP53907 740 aa3.87□□□□□ -1.79
VPS27YNR006W UTP6Q02354 440 aaKnown RBP3.87□□□□□ -1.79
VPS27YNR006W RNT1Q02555 471 aa3.87□□□□□ -1.79
VPS27YNR006W YDR179W-AQ03983 463 aa3.87□□□□□ -1.79
VPS27YNR006W RRP45Q05636 305 aaKnown RBP3.87□□□□□ -1.79
VPS27YNR006W COQ9Q05779 260 aa3.87□□□□□ -1.79
VPS27YNR006W KAP95Q06142 861 aaKnown RBP3.87□□□□□ -1.79
VPS27YNR006W YDR061WQ12298 539 aa3.87□□□□□ -1.79
VPS27YNR006W YKL033W-AQ86ZR7 236 aa3.87□□□□□ -1.79
VPS27YNR006W CHO2P05374 869 aaKnown RBP3.86□□□□□ -1.79
VPS27YNR006W PUT4P15380 627 aa3.86□□□□□ -1.79
VPS27YNR006W PET123P17558 318 aa3.86□□□□□ -1.79
VPS27YNR006W IMG1P25626 169 aa3.86□□□□□ -1.79
VPS27YNR006W YBL055CP34220 418 aaPredicted RBP3.86□□□□□ -1.79
VPS27YNR006W BFR1P38934 470 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
VPS27YNR006W FMP52P40008 231 aa3.86□□□□□ -1.79
VPS27YNR006W FAR3P46671 204 aa3.86□□□□□ -1.79
VPS27YNR006W DPB11P47027 764 aaPredicted RBP3.86□□□□□ -1.79
VPS27YNR006W MSC1Q03104 513 aa3.86□□□□□ -1.79
VPS27YNR006W YDR109CQ04585 715 aa3.86□□□□□ -1.79
VPS27YNR006W MRPL1Q04599 285 aa3.86□□□□□ -1.79
VPS27YNR006W YSH1Q06224 779 aaPredicted RBP3.86□□□□□ -1.79
VPS27YNR006W YDL086WQ07505 273 aa3.86□□□□□ -1.79
VPS27YNR006W YFH1Q07540 174 aa3.86□□□□□ -1.79
VPS27YNR006W RRT8Q08219 342 aa3.86□□□□□ -1.79
VPS27YNR006W GSH2Q08220 491 aa3.86□□□□□ -1.79
VPS27YNR006W LCB4Q12246 624 aa3.86□□□□□ -1.79
VPS27YNR006W PFK27Q12471 397 aaPredicted RBP3.86□□□□□ -1.79
VPS27YNR006W NBL1Q3E7Y6 73 aa3.86□□□□□ -1.79
VPS27YNR006W YLR278CQ05854 1341 aa3.86□□□□□ -1.79
VPS27YNR006W PPR1P07272 904 aaPredicted RBP3.86□□□□□ -1.79
VPS27YNR006W KRS1P15180 591 aaKnown RBP3.86□□□□□ -1.79
VPS27YNR006W STE4P18851 423 aa3.86□□□□□ -1.79
VPS27YNR006W GEX1P25596 615 aa3.86□□□□□ -1.79
VPS27YNR006W LAC1P28496 418 aa3.86□□□□□ -1.79
VPS27YNR006W GSH1P32477 678 aa3.86□□□□□ -1.79
VPS27YNR006W SIP1P32578 815 aa3.86□□□□□ -1.79
VPS27YNR006W HIS7P33734 552 aaKnown RBP3.86□□□□□ -1.79
VPS27YNR006W RPF2P36160 344 aaKnown RBP3.86□□□□□ -1.79
VPS27YNR006W IMD2P38697 523 aaKnown RBP3.86□□□□□ -1.79
VPS27YNR006W MSR1P38714 643 aa3.86□□□□□ -1.79
VPS27YNR006W SMC2P38989 1170 aaKnown RBP3.86□□□□□ -1.79
VPS27YNR006W PHM8P40025 321 aa3.86□□□□□ -1.79
VPS27YNR006W YJL107CP42947 387 aa3.86□□□□□ -1.79
VPS27YNR006W LAM5P43560 674 aa3.86□□□□□ -1.79
VPS27YNR006W YFR020WP43600 232 aa3.86□□□□□ -1.79
VPS27YNR006W BPL1P48445 690 aaPredicted RBP3.86□□□□□ -1.79
VPS27YNR006W CAF130P53280 1122 aaPredicted RBP3.86□□□□□ -1.79
VPS27YNR006W DIP5P53388 608 aa3.86□□□□□ -1.79
VPS27YNR006W AEP3Q12089 606 aa3.86□□□□□ -1.79
VPS27YNR006W RKI1Q12189 258 aa3.86□□□□□ -1.79
VPS27YNR006W NDJ1Q12366 352 aa3.86□□□□□ -1.79
VPS27YNR006W CBP2P03874 630 aaPredicted RBP3.85□□□□□ -1.79
VPS27YNR006W HXK2P04807 486 aaKnown RBP3.85□□□□□ -1.79
VPS27YNR006W STE3P06783 470 aa3.85□□□□□ -1.79
VPS27YNR006W CBP1P07252 654 aa3.85□□□□□ -1.79
VPS27YNR006W GAL7P08431 366 aa3.85□□□□□ -1.79
VPS27YNR006W PET111P08468 800 aa3.85□□□□□ -1.79
VPS27YNR006W RPL31BP0C2H9 113 aaKnown RBP3.85□□□□□ -1.79
VPS27YNR006W PMI40P29952 429 aaKnown RBP3.85□□□□□ -1.79
VPS27YNR006W RPT5P33297 434 aaKnown RBP3.85□□□□□ -1.79
VPS27YNR006W COY1P34237 679 aa3.85□□□□□ -1.79
VPS27YNR006W ZTA1P38230 334 aaKnown RBP3.85□□□□□ -1.79
VPS27YNR006W NTC20P38302 140 aaPredicted RBP3.85□□□□□ -1.79
VPS27YNR006W SUL1P38359 859 aa3.85□□□□□ -1.79
VPS27YNR006W KSP1P38691 1029 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 102 ms