RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	DOC1	P53068	250 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	YTP1	P53584	459 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	PRM1	P53835	661 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	ALO1	P54783	526 aa	Known RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	SHR3	Q02774	210 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	DIG1	Q03063	452 aa	Known RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	TRM82	Q03774	444 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	SSL1	Q04673	461 aa	Predicted RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	YLR173W	Q06247	608 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	THI73	Q07904	523 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	BDS1	Q08347	646 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	HAL9	Q12180	1030 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	PNS1	Q12412	539 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	DCP1	Q12517	231 aa	Predicted RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	URB1	P34241	1764 aa	Known RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	ERG11	P10614	530 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	PET9	P18239	318 aa	Known RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	SCM4	P32564	187 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.05	□□□□□ -1.28	not detected
MSB3	YNL293W	ECM2	P38241	364 aa	Known RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	RMD6	P39975	231 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	RGI1	P40043	161 aa	Predicted RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	HXT9	P40885	567 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	YFL034W	P43564	1073 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	AIP1	P46680	615 aa	Known RBP	7.05	□□□□□ -1.28
MSB3	YNL293W	GUF1	P46943	645 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	TPN1	P53099	579 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	YNR062C	P53748	327 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	MRL1	Q06815	381 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	ASA1	Q06822	443 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	ESA1	Q08649	445 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	RPN6	Q12377	434 aa		7.05	□□□□□ -1.28
MSB3	YNL293W	INO1	P11986	533 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	ENA1	P13587	1091 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	GIT1	P25346	518 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	KTR1	P27810	393 aa	Known RBP	7.04	□□□□□ -1.28
MSB3	YNL293W	YIM1	P28625	365 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	THI4	P32318	326 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	PHA2	P32452	334 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	PPG1	P32838	368 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	VPS17	P32913	551 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	PDR3	P33200	976 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	DHR2	P36009	735 aa	Predicted RBP	7.04	□□□□□ -1.28
MSB3	YNL293W	GUA1	P38625	525 aa	Known RBP	7.04	□□□□□ -1.28
MSB3	YNL293W	LSB6	P42951	607 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	GNA1	P43577	159 aa	Predicted RBP	7.04	□□□□□ -1.28
MSB3	YNL293W	YJL043W	P47053	257 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	PEX8	P53248	589 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	ARP4	P80428	489 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	7.04	□□□□□ -1.28	not detected
MSB3	YNL293W	ENA2	Q01896	1091 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	RLI1	Q03195	608 aa	Known RBP	7.04	□□□□□ -1.28
MSB3	YNL293W	VPS74	Q06385	345 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	PHO92	Q06390	306 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	PIB1	Q06651	286 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	CDC73	Q06697	393 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	YPR1	Q12458	312 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	ENA5	Q12691	1091 aa		7.04	□□□□□ -1.28
MSB3	YNL293W	SPT3	P06844	337 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	SPS4	P09937	338 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	SNF4	P12904	322 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	RPL8A	P17076	256 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	FUR1	P18562	216 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	CCA1	P21269	546 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	SLY1	P22213	666 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	IFM1	P25038	676 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	RAD14	P28519	371 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	RPL8B	P29453	256 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	VMA5	P31412	392 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	DAL3	P32459	195 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	HYM1	P32464	399 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	PTC1	P35182	281 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	SRP102	P36057	244 aa	Predicted RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	KAE1	P36132	386 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	MRPL3	P36516	390 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	CST26	P38226	397 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	KSP1	P38691	1029 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	YHR182W	P38870	785 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	VAB2	P40003	282 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	YIL166C	P40445	542 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	PRK1	P40494	810 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	YRB2	P40517	327 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	VHR1	P40522	640 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	DLD2	P46681	530 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	IRC18	P47056	224 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	UBC12	P52491	188 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	SCY1	P53009	804 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	ART5	P53244	586 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	CBK1	P53894	756 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	DAK1	P54838	584 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	UTP6	Q02354	440 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	ECM23	Q02710	187 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	YML037C	Q03703	340 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	BCH1	Q05029	724 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	STB3	Q12427	513 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	ATP2	P00830	511 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	MRP1	P10662	321 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	PEP5	P12868	1029 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	UTR1	P21373	530 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	DIT2	P21595	489 aa		7.03	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms