RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C ARX1Q03862 593 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C YEL077CQ3E7X8 1277 aa2.46□□□□□ -2.02
SGS1YMR190C MTR10Q99189 972 aa2.46□□□□□ -2.02
SGS1YMR190C IZH4Q99393 312 aa2.46□□□□□ -2.02
SGS1YMR190C CAR2P07991 424 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C PMT1P33775 817 aa2.46□□□□□ -2.02
SGS1YMR190C OLA1P38219 394 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C POP4P38336 279 aa2.46□□□□□ -2.02
SGS1YMR190C FLC2P39719 783 aa2.46□□□□□ -2.02
SGS1YMR190C SAP1P39955 897 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C IME4P41833 600 aa2.46□□□□□ -2.02
SGS1YMR190C TAN1P53072 289 aaPredicted RBP2.46□□□□□ -2.02
SGS1YMR190C SUB1P54000 292 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C YLR177WQ06251 628 aa2.46□□□□□ -2.02
SGS1YMR190C CYK3Q07533 885 aa2.46□□□□□ -2.02
SGS1YMR190C PMR1P13586 950 aa2.45□□□□□ -2.02
SGS1YMR190C KAR3P17119 729 aa2.45□□□□□ -2.02
SGS1YMR190C REC107P21651 314 aa2.45□□□□□ -2.02
SGS1YMR190C BAS1P22035 811 aa2.45□□□□□ -2.02
SGS1YMR190C YCK1P23291 538 aa2.45□□□□□ -2.02
SGS1YMR190C GCD11P32481 527 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C LOS1P33418 1100 aaPredicted RBP2.45□□□□□ -2.02
SGS1YMR190C VPS21P36017 210 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C VPS51P36116 164 aa2.45□□□□□ -2.02
SGS1YMR190C TFG1P41895 735 aaPredicted RBP2.45□□□□□ -2.02
SGS1YMR190C SSU1P41930 458 aa2.45□□□□□ -2.02
SGS1YMR190C GND2P53319 492 aa2.45□□□□□ -2.02
SGS1YMR190C FMN1Q03778 218 aa2.45□□□□□ -2.02
SGS1YMR190C SLD7Q08457 257 aa2.45□□□□□ -2.02
SGS1YMR190C RUD3Q12234 484 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C QCR6P00127 147 aa2.45□□□□□ -2.02
SGS1YMR190C GAL3P13045 520 aa2.45□□□□□ -2.02
SGS1YMR190C YIH1P25637 258 aa2.45□□□□□ -2.02
SGS1YMR190C SEC1P30619 724 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C HIR2P32480 875 aa2.45□□□□□ -2.02
SGS1YMR190C UGP1P32861 499 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C RPC37P36121 282 aa2.45□□□□□ -2.02
SGS1YMR190C MED8P38304 223 aa2.45□□□□□ -2.02
SGS1YMR190C PEX18P38855 283 aa2.45□□□□□ -2.02
SGS1YMR190C PFK26P40433 827 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C GTR1Q00582 310 aa2.45□□□□□ -2.02
SGS1YMR190C NHP10Q03435 203 aa2.45□□□□□ -2.02
SGS1YMR190C YMR027WQ04371 470 aa2.45□□□□□ -2.02
SGS1YMR190C FAR8Q05040 523 aa2.45□□□□□ -2.02
SGS1YMR190C GIC2Q06648 383 aa2.45□□□□□ -2.02
SGS1YMR190C NDE2Q07500 545 aa2.45□□□□□ -2.02
SGS1YMR190C CUE5Q08412 411 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C RSB1Q08417 382 aa2.45□□□□□ -2.02
SGS1YMR190C THI21Q08975 551 aa2.45□□□□□ -2.02
SGS1YMR190C LYS21Q12122 440 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C ERP4Q12450 207 aa2.45□□□□□ -2.02
SGS1YMR190C MSS116P15424 664 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C RSC6P25632 483 aa2.45□□□□□ -2.02
SGS1YMR190C SRB2P34162 210 aa2.45□□□□□ -2.02
SGS1YMR190C YKL075CP36083 450 aa2.45□□□□□ -2.02
SGS1YMR190C YKR073CP36153 106 aa2.45□□□□□ -2.02
SGS1YMR190C VRP1P37370 817 aa2.45□□□□□ -2.02
SGS1YMR190C CYC2P38909 366 aa2.45□□□□□ -2.02
SGS1YMR190C ECM1P39715 212 aa2.45□□□□□ -2.02
SGS1YMR190C RRT5P43607 289 aa2.45□□□□□ -2.02
SGS1YMR190C MNT2P53059 558 aa2.45□□□□□ -2.02
SGS1YMR190C YNL011CP53980 444 aa2.45□□□□□ -2.02
SGS1YMR190C TIM10P87108 93 aa2.45□□□□□ -2.02
SGS1YMR190C RVB1Q03940 463 aaKnown RBP2.45□□□□□ -2.02
SGS1YMR190C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SGS1YMR190C RHO1P06780 209 aaKnown RBP2.44□□□□□ -2.02
SGS1YMR190C CDC24P11433 854 aaPredicted RBP2.44□□□□□ -2.02
SGS1YMR190C SEC63P14906 663 aa2.44□□□□□ -2.02
SGS1YMR190C GAS1P22146 559 aaKnown RBP2.44□□□□□ -2.02
SGS1YMR190C CPR3P25719 182 aa2.44□□□□□ -2.02
SGS1YMR190C RAD5P32849 1169 aaPredicted RBP2.44□□□□□ -2.02
SGS1YMR190C GIP2P40036 548 aa2.44□□□□□ -2.02
SGS1YMR190C YIL054WP40524 105 aa2.44□□□□□ -2.02
SGS1YMR190C CDC1P40986 491 aa2.44□□□□□ -2.02
SGS1YMR190C REF2P42073 533 aaPredicted RBP2.44□□□□□ -2.02
SGS1YMR190C SNG1P46950 547 aa2.44□□□□□ -2.02
SGS1YMR190C YGL260WP53056 76 aa2.44□□□□□ -2.02
SGS1YMR190C RPN9Q04062 393 aaKnown RBP2.44□□□□□ -2.02
SGS1YMR190C SPG3Q04398 127 aaPredicted RBP2.44□□□□□ -2.02
SGS1YMR190C YLR446WQ06204 433 aa2.44□□□□□ -2.02
SGS1YMR190C RIB2Q12362 591 aaKnown RBP2.44□□□□□ -2.02
SGS1YMR190C FUR1P18562 216 aaKnown RBP2.44□□□□□ -2.02
SGS1YMR190C BUB3P26449 341 aa2.44□□□□□ -2.02
SGS1YMR190C DEP1P31385 405 aa2.44□□□□□ -2.02
SGS1YMR190C PDB1P32473 366 aaKnown RBP2.44□□□□□ -2.02
SGS1YMR190C TMA22P47089 198 aaPredicted RBP2.44□□□□□ -2.02
SGS1YMR190C YML6P51998 286 aa2.44□□□□□ -2.02
SGS1YMR190C MKC7P53379 596 aa2.44□□□□□ -2.02
SGS1YMR190C YNL260CP53846 198 aa2.44□□□□□ -2.02
SGS1YMR190C NUP116Q02630 1113 aa2.44□□□□□ -2.02
SGS1YMR190C GET4Q12125 312 aa2.44□□□□□ -2.02
SGS1YMR190C YLL054CQ12244 843 aa2.44□□□□□ -2.02
SGS1YMR190C GLE1Q12315 538 aa2.44□□□□□ -2.02
SGS1YMR190C GEP5Q12393 293 aa2.44□□□□□ -2.02
SGS1YMR190C AI1P03875 834 aa2.44□□□□□ -2.02
SGS1YMR190C GLN4P13188 809 aaKnown RBP2.44□□□□□ -2.02
SGS1YMR190C VMA4P22203 233 aaKnown RBP2.44□□□□□ -2.02
SGS1YMR190C MRPL8P22353 238 aa2.44□□□□□ -2.02
SGS1YMR190C SMI1P32566 505 aa2.44□□□□□ -2.02
SGS1YMR190C PET127P32606 800 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms