RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W BUD5P25300 642 aaPredicted RBP3.4□□□□□ -1.87
CST9YLR394W IMG1P25626 169 aa3.4□□□□□ -1.87
CST9YLR394W NOP4P37838 685 aaKnown RBP3.4□□□□□ -1.87
CST9YLR394W SRO77P38163 1010 aa3.4□□□□□ -1.87
CST9YLR394W MET30P39014 640 aa3.4□□□□□ -1.87
CST9YLR394W YEL057CP39983 233 aa3.4□□□□□ -1.87
CST9YLR394W YND1P40009 630 aa3.4□□□□□ -1.87
CST9YLR394W NDE1P40215 560 aa3.4□□□□□ -1.87
CST9YLR394W YNL234WP53857 426 aa3.4□□□□□ -1.87
CST9YLR394W NUP53Q03790 475 aa3.4□□□□□ -1.87
CST9YLR394W ARG81P05085 880 aa3.39□□□□□ -1.87
CST9YLR394W NOP1P15646 327 aaKnown RBP3.39□□□□□ -1.87
CST9YLR394W EST1P17214 699 aaPredicted RBP3.39□□□□□ -1.87
CST9YLR394W GID7P25569 745 aa3.39□□□□□ -1.87
CST9YLR394W NAB3P38996 802 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
CST9YLR394W YNL181WP53878 407 aa3.39□□□□□ -1.87
CST9YLR394W COQ9Q05779 260 aa3.39□□□□□ -1.87
CST9YLR394W YJR112W-AQ3E743 109 aa3.39□□□□□ -1.87
CST9YLR394W RPO31P04051 1460 aa3.39□□□□□ -1.87
CST9YLR394W YPK9Q12697 1472 aa3.39□□□□□ -1.87
CST9YLR394W CBS1P14066 229 aa3.38□□□□□ -1.87
CST9YLR394W PMS1P14242 873 aa3.38□□□□□ -1.87
CST9YLR394W HNM1P19807 563 aa3.38□□□□□ -1.87
CST9YLR394W SPC34P36131 295 aa3.38□□□□□ -1.87
CST9YLR394W RPL32P38061 130 aaKnown RBP3.38□□□□□ -1.87
CST9YLR394W RMD8P43620 662 aa3.38□□□□□ -1.87
CST9YLR394W FAR3P46671 204 aa3.38□□□□□ -1.87
CST9YLR394W GUF1P46943 645 aa3.38□□□□□ -1.87
CST9YLR394W IMD4P50094 524 aaKnown RBP3.38□□□□□ -1.87
CST9YLR394W IPI3P53877 555 aa3.38□□□□□ -1.87
CST9YLR394W VPS72Q03388 795 aa3.38□□□□□ -1.87
CST9YLR394W DIC1Q06143 298 aa3.38□□□□□ -1.87
CST9YLR394W RDR1Q08904 546 aa3.38□□□□□ -1.87
CST9YLR394W FMP40Q08968 688 aaPredicted RBP3.38□□□□□ -1.87
CST9YLR394W PAN1P32521 1480 aa3.38□□□□□ -1.87
CST9YLR394W GEA2P39993 1459 aaKnown RBP3.38□□□□□ -1.87
CST9YLR394W MMS1Q06211 1407 aa3.38□□□□□ -1.87
CST9YLR394W IRC20Q06554 1556 aa3.38□□□□□ -1.87
CST9YLR394W TY1B-HO13535 1793 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-DR5P0C2I2 1755 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-DR6P0C2I3 1755 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-LR2P0C2I5 1755 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-LR3P0C2I6 1755 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W TY1B-PR1P0C2I9 1755 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W TY1B-PR2P0C2J0 1756 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-PR3P0C2J1 1755 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W TY1B-JR1P47098 1755 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-ML2Q03434 1755 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W TY1B-ER1Q03612 1755 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-ML1Q04711 1755 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W TY1B-GR2Q12269 1755 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-OLQ12273 1755 aa3.37□□□□□ -1.87
CST9YLR394W TY1B-PLQ12414 1755 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W TY2B-BQ12491 1770 aa3.37□□□□□ -1.87
CST9YLR394W ARG3P05150 338 aa3.37□□□□□ -1.87
CST9YLR394W PEP4P07267 405 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W ART10P18634 518 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W BOS1P25385 244 aa3.37□□□□□ -1.87
CST9YLR394W YKL100CP34248 587 aa3.37□□□□□ -1.87
CST9YLR394W GCS1P35197 352 aa3.37□□□□□ -1.87
CST9YLR394W TCD2P36101 447 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W ROT2P38138 954 aa3.37□□□□□ -1.87
CST9YLR394W YIL169CP40442 995 aa3.37□□□□□ -1.87
CST9YLR394W SPO22P40511 975 aa3.37□□□□□ -1.87
CST9YLR394W MET28P40573 187 aa3.37□□□□□ -1.87
CST9YLR394W PTR3P43606 678 aa3.37□□□□□ -1.87
CST9YLR394W RBG2P53295 368 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W BUD32P53323 261 aa3.37□□□□□ -1.87
CST9YLR394W YVH1Q02256 364 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W ETT1Q08421 412 aaKnown RBP3.37□□□□□ -1.87
CST9YLR394W RCN2Q12044 265 aa3.37□□□□□ -1.87
CST9YLR394W RLM1Q12224 676 aa3.37□□□□□ -1.87
CST9YLR394W GCN4P03069 281 aa3.36□□□□□ -1.87
CST9YLR394W BAR1P12630 587 aa3.36□□□□□ -1.87
CST9YLR394W CDC23P16522 626 aa3.36□□□□□ -1.87
CST9YLR394W PEP3P27801 918 aa3.36□□□□□ -1.87
CST9YLR394W SEC1P30619 724 aaKnown RBP3.36□□□□□ -1.87
CST9YLR394W RPN12P32496 274 aa3.36□□□□□ -1.87
CST9YLR394W ICS2P38284 255 aa3.36□□□□□ -1.87
CST9YLR394W ERG7P38604 731 aa3.36□□□□□ -1.87
CST9YLR394W ERP2P39704 215 aa3.36□□□□□ -1.87
CST9YLR394W AFG3P39925 761 aa3.36□□□□□ -1.87
CST9YLR394W IAH1P41734 238 aa3.36□□□□□ -1.87
CST9YLR394W RSF1Q05043 376 aa3.36□□□□□ -1.87
CST9YLR394W YRF1-1P0CX20 1796 aa3.36□□□□□ -1.87
CST9YLR394W YRF1-5P0CX21 1796 aa3.36□□□□□ -1.87
CST9YLR394W YRF1-8P0CX22 1796 aa3.36□□□□□ -1.87
CST9YLR394W TY1B-DR3Q99231 1755 aa3.36□□□□□ -1.87
CST9YLR394W GAL80P04387 435 aa3.36□□□□□ -1.87
CST9YLR394W WBP1P33767 430 aaKnown RBP3.36□□□□□ -1.87
CST9YLR394W PHD1P36093 366 aa3.36□□□□□ -1.87
CST9YLR394W LAG1P38703 411 aa3.36□□□□□ -1.87
CST9YLR394W KEL1P38853 1164 aaKnown RBP3.36□□□□□ -1.87
CST9YLR394W IRC6P43615 237 aa3.36□□□□□ -1.87
CST9YLR394W AIM22P47051 409 aa3.36□□□□□ -1.87
CST9YLR394W YGR127WP53275 312 aa3.36□□□□□ -1.87
CST9YLR394W SMM1P53720 384 aaKnown RBP3.36□□□□□ -1.87
CST9YLR394W YPL014WQ02606 381 aa3.36□□□□□ -1.87
CST9YLR394W YMR087WQ04299 284 aa3.36□□□□□ -1.87
CST9YLR394W VPS38Q05919 439 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms