RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	RIM21	P48565	533 aa		6.59	□□□□□ -1.35
MSC3	YLR219W	YPR109W	Q06104	294 aa		6.59	□□□□□ -1.35
MSC3	YLR219W	RAD34	Q06665	692 aa		6.59	□□□□□ -1.35
MSC3	YLR219W	GRS2	Q06817	618 aa		6.59	□□□□□ -1.35
MSC3	YLR219W	PLB3	Q08108	686 aa		6.59	□□□□□ -1.35
MSC3	YLR219W	SRO7	Q12038	1033 aa		6.59	□□□□□ -1.35
MSC3	YLR219W	GFD2	P25370	566 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	BUB2	P26448	306 aa	Predicted RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	EMP65	P40085	556 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	SEC27	P41811	889 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	NOP19	P53317	196 aa	Predicted RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	UBP2	Q01476	1272 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	ROT1	Q03691	256 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	BCH1	Q05029	724 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	ESA1	Q08649	445 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	RTT10	Q08924	1013 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	YLR049C	Q12110	428 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	STT4	P37297	1900 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	CAR1	P00812	333 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	RAD14	P28519	371 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	SPR1	P32603	445 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	RPS0A	P32905	252 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	RPS1A	P33442	255 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	PTC1	P35182	281 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	PCF11	P39081	626 aa	Predicted RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	SPF1	P39986	1215 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	SCS2	P40075	244 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	MET18	P40469	1032 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	FKH2	P41813	862 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	TMA22	P47089	198 aa	Predicted RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	MPS2	P53159	387 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	YGR015C	P53208	328 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	CUS2	P53830	285 aa	Predicted RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	YNL010W	P53981	241 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	REX2	P54964	269 aa	Known RBP	6.58	□□□□□ -1.36
MSC3	YLR219W	YEH2	Q07950	538 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	MCD1	Q12158	566 aa		6.58	□□□□□ -1.36
MSC3	YLR219W	TRP3	P00937	484 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	STE3	P06783	470 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	YHR127W	P38833	243 aa	Known RBP	6.57	□□□□□ -1.36
MSC3	YLR219W	GIM4	P40005	111 aa	Known RBP	6.57	□□□□□ -1.36
MSC3	YLR219W	YFR020W	P43600	232 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	GCV1	P48015	400 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	YPT32	P51996	222 aa	Known RBP	6.57	□□□□□ -1.36
MSC3	YLR219W	YET2	Q04210	160 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	COX3	P00420	269 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	AI4	P03878	556 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	COS2	P0CX12	379 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	COS3	P0CX13	379 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	RSR1	P13856	272 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	CRM1	P30822	1084 aa	Known RBP	6.57	□□□□□ -1.36
MSC3	YLR219W	YKL100C	P34248	587 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	DED81	P38707	554 aa	Known RBP	6.57	□□□□□ -1.36
MSC3	YLR219W	YER034W	P40022	185 aa	Known RBP	6.57	□□□□□ -1.36
MSC3	YLR219W	YIL108W	P40483	696 aa	Known RBP	6.57	□□□□□ -1.36
MSC3	YLR219W	GCD10	P41814	478 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	COS4	P43542	379 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	YGL176C	P46945	554 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	YJR149W	P47177	404 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	USE1	P53146	245 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	YDR444W	Q04093	687 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	YDR338C	Q05497	695 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	DIA2	Q08496	732 aa	Predicted RBP	6.57	□□□□□ -1.36
MSC3	YLR219W	TFB4	Q12004	338 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	PFA4	Q12006	378 aa		6.57	□□□□□ -1.36
MSC3	YLR219W	FMP27	Q06179	2628 aa		6.56	□□□□□ -1.36
MSC3	YLR219W	PRP6	P19735	899 aa	Predicted RBP	6.56	□□□□□ -1.36
MSC3	YLR219W	DBR1	P24309	405 aa	Known RBP	6.56	□□□□□ -1.36
MSC3	YLR219W	RMA1	P36001	430 aa	Known RBP	6.56	□□□□□ -1.36
MSC3	YLR219W	LGE1	Q02796	332 aa	Known RBP	6.56	□□□□□ -1.36
MSC3	YLR219W	YPL109C	Q02981	657 aa		6.56	□□□□□ -1.36
MSC3	YLR219W	CTK1	Q03957	528 aa	Known RBP	6.56	□□□□□ -1.36
MSC3	YLR219W	YMR111C	Q04461	462 aa	Predicted RBP	6.56	□□□□□ -1.36
MSC3	YLR219W	YFT2	Q06676	274 aa		6.56	□□□□□ -1.36
MSC3	YLR219W	OSW1	Q08692	278 aa		6.56	□□□□□ -1.36
MSC3	YLR219W	HRP1	Q99383	534 aa	Known RBP	6.56	□□□□□ -1.36
MSC3	YLR219W	SCL1	P21243	252 aa	Known RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	MGM101	P32787	269 aa	Known RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	6.55	□□□□□ -1.36	not detected
MSC3	YLR219W	TSC10	P38342	320 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	INM1	P38710	295 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	ARN1	P38731	627 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	YPT35	P38815	214 aa	Known RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	ARB1	P40024	610 aa	Known RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	PTR3	P43606	678 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	MDM34	P53083	459 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	SPC24	Q04477	213 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	YPL225W	Q08971	146 aa	Known RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	YDR056C	Q12025	205 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	YPL245W	Q12179	454 aa	Known RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	RRP42	Q12277	265 aa	Predicted RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	MHT1	Q12525	324 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	PMR1	P13586	950 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	TRM1	P15565	570 aa	Known RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	CLB1	P24868	471 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	PDB1	P32473	366 aa	Known RBP	6.55	□□□□□ -1.36
MSC3	YLR219W	YBL029W	P38201	376 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	YHL008C	P38750	627 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	YEN1	P40028	759 aa		6.55	□□□□□ -1.36
MSC3	YLR219W	YJR030C	P47101	745 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms