RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C BUD32P53323 261 aa1.76□□□□□ -2.13
RFX1YLR176C YTH1Q06102 208 aaPredicted RBP1.76□□□□□ -2.13
RFX1YLR176C YDL057WQ07379 328 aa1.76□□□□□ -2.13
RFX1YLR176C YEH2Q07950 538 aa1.76□□□□□ -2.13
RFX1YLR176C FMP40Q08968 688 aaPredicted RBP1.76□□□□□ -2.13
RFX1YLR176C SEM1O94742 89 aa1.75□□□□□ -2.13
RFX1YLR176C PHO2P07269 559 aa1.75□□□□□ -2.13
RFX1YLR176C SEC53P07283 254 aaKnown RBP1.75□□□□□ -2.13
RFX1YLR176C SEC62P21825 274 aa1.75□□□□□ -2.13
RFX1YLR176C GFD2P25370 566 aaKnown RBP1.75□□□□□ -2.13
RFX1YLR176C SAC6P32599 642 aaKnown RBP1.75□□□□□ -2.13
RFX1YLR176C TIF3P34167 436 aaKnown RBP1.75□□□□□ -2.13
RFX1YLR176C ECM15P35195 104 aa1.75□□□□□ -2.13
RFX1YLR176C CCT6P39079 546 aa1.75□□□□□ -2.13
RFX1YLR176C UPF3P48412 387 aaKnown RBP1.75□□□□□ -2.13
RFX1YLR176C YGL082WP53155 381 aa1.75□□□□□ -2.13
RFX1YLR176C IPI3P53877 555 aa1.75□□□□□ -2.13
RFX1YLR176C RHO4Q00246 291 aa1.75□□□□□ -2.13
RFX1YLR176C SHR3Q02774 210 aa1.75□□□□□ -2.13
RFX1YLR176C YMR087WQ04299 284 aa1.75□□□□□ -2.13
RFX1YLR176C GLO2Q05584 274 aa1.75□□□□□ -2.13
RFX1YLR176C MRS3P10566 314 aa1.75□□□□□ -2.13
RFX1YLR176C SGF29P25554 259 aa1.75□□□□□ -2.13
RFX1YLR176C VPS17P32913 551 aa1.75□□□□□ -2.13
RFX1YLR176C YKL023WP36103 277 aaKnown RBP1.75□□□□□ -2.13
RFX1YLR176C CIN4P39110 191 aa1.75□□□□□ -2.13
RFX1YLR176C FLC2P39719 783 aa1.75□□□□□ -2.13
RFX1YLR176C TMA108P40462 946 aa1.75□□□□□ -2.13
RFX1YLR176C IKS1P47042 667 aa1.75□□□□□ -2.13
RFX1YLR176C RPC11Q04307 110 aaPredicted RBP1.75□□□□□ -2.13
RFX1YLR176C YEH1Q07804 573 aa1.75□□□□□ -2.13
RFX1YLR176C CDC45Q08032 650 aa1.75□□□□□ -2.13
RFX1YLR176C THI20Q08224 551 aa1.75□□□□□ -2.13
RFX1YLR176C SDH5Q08230 162 aa1.75□□□□□ -2.13
RFX1YLR176C NMD4Q12129 218 aa1.75□□□□□ -2.13
RFX1YLR176C YPT6Q99260 215 aa1.75□□□□□ -2.13
RFX1YLR176C PEP5P12868 1029 aa1.74□□□□□ -2.13
RFX1YLR176C ART10P18634 518 aaKnown RBP1.74□□□□□ -2.13
RFX1YLR176C SUI2P20459 304 aaKnown RBP1.74□□□□□ -2.13
RFX1YLR176C PRO3P32263 286 aaKnown RBP1.74□□□□□ -2.13
RFX1YLR176C RGT1P32862 1170 aa1.74□□□□□ -2.13
RFX1YLR176C SEF1P34228 1148 aa1.74□□□□□ -2.13
RFX1YLR176C YNK1P36010 153 aaKnown RBP1.74□□□□□ -2.13
RFX1YLR176C VPS52P39904 641 aa1.74□□□□□ -2.13
RFX1YLR176C MRX6P48564 524 aa1.74□□□□□ -2.13
RFX1YLR176C NCE102Q12207 173 aaRIP-Chip data1.74□□□□□ -2.13not detected
RFX1YLR176C DHH1P39517 506 aaKnown RBP1.74□□□□□ -2.13
RFX1YLR176C YTA12P40341 825 aa1.74□□□□□ -2.13
RFX1YLR176C ALG5P40350 334 aa1.74□□□□□ -2.13
RFX1YLR176C SGN1P40561 250 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
RFX1YLR176C IMD4P50094 524 aaKnown RBP1.74□□□□□ -2.13
RFX1YLR176C VID30P53076 958 aa1.74□□□□□ -2.13
RFX1YLR176C DRN1P53255 507 aaKnown RBP1.74□□□□□ -2.13
RFX1YLR176C RTT103Q05543 409 aa1.74□□□□□ -2.13
RFX1YLR176C COQ9Q05779 260 aa1.74□□□□□ -2.13
RFX1YLR176C PEP4P07267 405 aaKnown RBP1.73□□□□□ -2.13
RFX1YLR176C APE1P14904 514 aa1.73□□□□□ -2.13
RFX1YLR176C PEP3P27801 918 aa1.73□□□□□ -2.13
RFX1YLR176C ATS1P31386 333 aa1.73□□□□□ -2.13
RFX1YLR176C NDC1P32500 655 aa1.73□□□□□ -2.13
RFX1YLR176C SIP2P34164 415 aaKnown RBP1.73□□□□□ -2.13
RFX1YLR176C REG2P38232 338 aa1.73□□□□□ -2.13
RFX1YLR176C OSH3P38713 996 aaKnown RBP1.73□□□□□ -2.13
RFX1YLR176C ALT2P52892 507 aa1.73□□□□□ -2.13
RFX1YLR176C YDL121CQ07541 149 aa1.73□□□□□ -2.13
RFX1YLR176C CTI6Q08923 506 aa1.73□□□□□ -2.13
RFX1YLR176C RCN2Q12044 265 aa1.73□□□□□ -2.13
RFX1YLR176C RLM1Q12224 676 aa1.73□□□□□ -2.13
RFX1YLR176C YJR112W-AQ3E743 109 aa1.73□□□□□ -2.13
RFX1YLR176C HSH49Q99181 213 aaPredicted RBP1.73□□□□□ -2.13
RFX1YLR176C RPL15AP05748 204 aaKnown RBP1.72□□□□□ -2.13
RFX1YLR176C RAD52P06778 471 aaKnown RBP1.72□□□□□ -2.13
RFX1YLR176C CBS1P14066 229 aa1.72□□□□□ -2.13
RFX1YLR176C OLE1P21147 510 aaKnown RBP1.72□□□□□ -2.13
RFX1YLR176C ELO2P25358 347 aa1.72□□□□□ -2.13
RFX1YLR176C PTR2P32901 601 aa1.72□□□□□ -2.13
RFX1YLR176C TCD2P36101 447 aaKnown RBP1.72□□□□□ -2.13
RFX1YLR176C NOP4P37838 685 aaKnown RBP1.72□□□□□ -2.13
RFX1YLR176C MDM31P38880 579 aa1.72□□□□□ -2.13
RFX1YLR176C YHR210CP38893 341 aa1.72□□□□□ -2.13
RFX1YLR176C KRE9P39005 276 aa1.72□□□□□ -2.13
RFX1YLR176C CSM2P40465 213 aa1.72□□□□□ -2.13
RFX1YLR176C RLI1Q03195 608 aaKnown RBP1.72□□□□□ -2.13
RFX1YLR176C HCR1Q05775 265 aaKnown RBP1.72□□□□□ -2.13
RFX1YLR176C YOR365CQ08844 703 aa1.72□□□□□ -2.13
RFX1YLR176C YBR298C-AQ8TGK4 73 aa1.72□□□□□ -2.13
RFX1YLR176C FRE1P32791 686 aa1.72□□□□□ -2.13
RFX1YLR176C SRO77P38163 1010 aa1.72□□□□□ -2.13
RFX1YLR176C SCD6P45978 349 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13 RIP-Chip
RFX1YLR176C RTT101P47050 842 aa1.72□□□□□ -2.13
RFX1YLR176C AIM22P47051 409 aa1.72□□□□□ -2.13
RFX1YLR176C YJR154WP47181 346 aa1.72□□□□□ -2.13
RFX1YLR176C VPS75P53853 264 aa1.72□□□□□ -2.13
RFX1YLR176C RPM2Q02773 1202 aa1.72□□□□□ -2.13
RFX1YLR176C VPS38Q05919 439 aa1.72□□□□□ -2.13
RFX1YLR176C SYO1Q07395 620 aa1.72□□□□□ -2.13
RFX1YLR176C THP1Q08231 455 aa1.72□□□□□ -2.13
RFX1YLR176C BUD21Q08492 214 aaPredicted RBP1.72□□□□□ -2.13
RFX1YLR176C PPT2Q12036 173 aa1.72□□□□□ -2.13
RFX1YLR176C CAR1P00812 333 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms