RNA–Protein interactions for RNA: YLR116W

MSL5, Transcript of Component of commitment complex, yeast

Gene MSL5, Length 1,431 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSL5	YLR116W	ASE1	P50275	885 aa		2.42	□□□□□ -2.02
MSL5	YLR116W	BTN2	P53286	410 aa		2.42	□□□□□ -2.02
MSL5	YLR116W	RPT6	Q01939	405 aa	Known RBP	2.42	□□□□□ -2.02
MSL5	YLR116W	YMR155W	Q03795	547 aa		2.42	□□□□□ -2.02
MSL5	YLR116W	VTI1	Q04338	217 aa		2.42	□□□□□ -2.02
MSL5	YLR116W	RRP9	Q06506	573 aa	Known RBP	2.42	□□□□□ -2.02
MSL5	YLR116W	RIX7	Q07844	837 aa	Known RBP	2.42	□□□□□ -2.02
MSL5	YLR116W	YML003W	P0CF16	290 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	KAR3	P17119	729 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	CLB2	P24869	491 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	ROX1	P25042	368 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	RPC53	P25441	422 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	PEP3	P27801	918 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	ERG3	P32353	365 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	ERG1	P32476	496 aa	Known RBP	2.41	□□□□□ -2.02
MSL5	YLR116W	YBL029W	P38201	376 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	YIL161W	P40449	235 aa	Known RBP	2.41	□□□□□ -2.02
MSL5	YLR116W	ARF3	P40994	183 aa	RIP-Chip data	2.41	□□□□□ -2.02	not detected
MSL5	YLR116W	CTK2	P46962	323 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	AAD10	P47182	288 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	LCL3	P53153	274 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	PIL1	P53252	339 aa	Known RBP	2.41	□□□□□ -2.02
MSL5	YLR116W	INN1	P53901	409 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	YDR286C	Q05530	114 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	YDL218W	Q07629	317 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	CTI6	Q08923	506 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	NUS1	Q12063	375 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	HSP42	Q12329	375 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	RTN2	Q12443	393 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	ERG27	Q12452	347 aa	Known RBP	2.41	□□□□□ -2.02
MSL5	YLR116W	YOR019W	Q99248	730 aa		2.41	□□□□□ -2.02
MSL5	YLR116W	PET111	P08468	800 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	PRE8	P23639	250 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	POL4	P25615	582 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	CDC60	P26637	1090 aa	Known RBP	2.4	□□□□□ -2.03
MSL5	YLR116W	DPH2	P32461	534 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	NPL6	P32832	435 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	SOF1	P33750	489 aa	Known RBP	2.4	□□□□□ -2.03
MSL5	YLR116W	PXA2	P34230	853 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	SRO77	P38163	1010 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	FLC2	P39719	783 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	LSM5	P40089	93 aa	Known RBP	2.4	□□□□□ -2.03
MSL5	YLR116W	AXL1	P40851	1208 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	YDL186W	P48568	277 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	ATP22	P50273	684 aa	Predicted RBP	2.4	□□□□□ -2.03
MSL5	YLR116W	MUB1	Q03162	620 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	PGC1	Q08959	321 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	RCN2	Q12044	265 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	SWT1	Q12104	458 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	NMD4	Q12129	218 aa		2.4	□□□□□ -2.03
MSL5	YLR116W	NOP58	Q12499	511 aa	Known RBP	2.4	□□□□□ -2.03
MSL5	YLR116W	INO80	P53115	1489 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	GDH1	P07262	454 aa	Known RBP	2.39	□□□□□ -2.03
MSL5	YLR116W	MRS3	P10566	314 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	CBS1	P14066	229 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	OCA4	P25366	362 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	RPS2	P25443	254 aa	Known RBP	2.39	□□□□□ -2.03
MSL5	YLR116W	MAL33	P38157	468 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	SRP72	P38688	640 aa	Known RBP	2.39	□□□□□ -2.03
MSL5	YLR116W	YEL057C	P39983	233 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	SLZ1	P40167	298 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	SEC24	P40482	926 aa	Known RBP	2.39	□□□□□ -2.03
MSL5	YLR116W	IME4	P41833	600 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	LYS4	P49367	693 aa	Predicted RBP	2.39	□□□□□ -2.03
MSL5	YLR116W	YTP1	P53584	459 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	MAK10	Q02197	733 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	YEH2	Q07950	538 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	CDC45	Q08032	650 aa		2.39	□□□□□ -2.03
MSL5	YLR116W	PDX1	P16451	410 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	SRP54	P20424	541 aa	Known RBP	2.38	□□□□□ -2.03
MSL5	YLR116W	LCB1	P25045	558 aa	Known RBP	2.38	□□□□□ -2.03
MSL5	YLR116W	DBF4	P32325	704 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	SRB5	P32585	307 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	LOS1	P33418	1100 aa	Predicted RBP	2.38	□□□□□ -2.03
MSL5	YLR116W	YKL100C	P34248	587 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	REG2	P38232	338 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	LRP1	P38801	184 aa	Known RBP	2.38	□□□□□ -2.03
MSL5	YLR116W	UTP9	P38882	575 aa	Known RBP	2.38	□□□□□ -2.03
MSL5	YLR116W	POP2	P39008	433 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	YJL213W	P40896	331 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	GUF1	P46943	645 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	YML6	P51998	286 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	TIM11	P81449	96 aa	Predicted RBP	2.38	□□□□□ -2.03
MSL5	YLR116W	YML037C	Q03703	340 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	YDR341C	Q05506	607 aa	Known RBP	2.38	□□□□□ -2.03
MSL5	YLR116W	SKG3	Q06315	1026 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	YOL159C	Q08300	171 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	SPE4	Q12455	300 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	SMC6	Q12749	1114 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	YOL159C-A	Q3E769	90 aa		2.38	□□□□□ -2.03
MSL5	YLR116W	LSB5	P25369	354 aa		2.37	□□□□□ -2.03
MSL5	YLR116W	AAP1	P37898	856 aa	Known RBP	2.37	□□□□□ -2.03
MSL5	YLR116W	DOT5	P40553	215 aa		2.37	□□□□□ -2.03
MSL5	YLR116W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
MSL5	YLR116W	SWP82	P43554	623 aa		2.37	□□□□□ -2.03
MSL5	YLR116W	NUP100	Q02629	959 aa		2.37	□□□□□ -2.03
MSL5	YLR116W	RMT2	Q03305	412 aa		2.37	□□□□□ -2.03
MSL5	YLR116W	YDR131C	Q03899	556 aa		2.37	□□□□□ -2.03
MSL5	YLR116W	HEL2	Q05580	639 aa	Known RBP	2.37	□□□□□ -2.03
MSL5	YLR116W	TCO89	Q08921	799 aa		2.37	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms