RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C DRN1P53255 507 aaKnown RBP2.79□□□□□ -1.96
AFB1YLR040C RHO4Q00246 291 aa2.79□□□□□ -1.96
AFB1YLR040C ETT1Q08421 412 aaKnown RBP2.79□□□□□ -1.96
AFB1YLR040C YBR126W-AQ8TGU7 68 aa2.79□□□□□ -1.96
AFB1YLR040C MF(ALPHA)1P01149 165 aa2.78□□□□□ -1.96
AFB1YLR040C MRP13P12686 339 aa2.78□□□□□ -1.96
AFB1YLR040C PEP5P12868 1029 aa2.78□□□□□ -1.96
AFB1YLR040C TIF3P34167 436 aaKnown RBP2.78□□□□□ -1.96
AFB1YLR040C YBL029WP38201 376 aa2.78□□□□□ -1.96
AFB1YLR040C RRP3P38712 501 aaKnown RBP2.78□□□□□ -1.96
AFB1YLR040C VPS52P39904 641 aa2.78□□□□□ -1.96
AFB1YLR040C VID27P40157 782 aa2.78□□□□□ -1.96
AFB1YLR040C RPR2P40571 144 aa2.78□□□□□ -1.96
AFB1YLR040C YFR016CP43597 1233 aaKnown RBP2.78□□□□□ -1.96
AFB1YLR040C FAR3P46671 204 aa2.78□□□□□ -1.96
AFB1YLR040C SNG1P46950 547 aa2.78□□□□□ -1.96
AFB1YLR040C DSD1P53095 428 aa2.78□□□□□ -1.96
AFB1YLR040C IMP4P53941 290 aaKnown RBP2.78□□□□□ -1.96
AFB1YLR040C SHR3Q02774 210 aa2.78□□□□□ -1.96
AFB1YLR040C YML037CQ03703 340 aa2.78□□□□□ -1.96
AFB1YLR040C BUD22Q04347 519 aaKnown RBP2.78□□□□□ -1.96
AFB1YLR040C GLO2Q05584 274 aa2.78□□□□□ -1.96
AFB1YLR040C YCR022CP25620 114 aa2.77□□□□□ -1.97
AFB1YLR040C YIH1P25637 258 aa2.77□□□□□ -1.97
AFB1YLR040C OSH3P38713 996 aaKnown RBP2.77□□□□□ -1.97
AFB1YLR040C CCT6P39079 546 aa2.77□□□□□ -1.97
AFB1YLR040C RPH1P39956 796 aa2.77□□□□□ -1.97
AFB1YLR040C YTA12P40341 825 aa2.77□□□□□ -1.97
AFB1YLR040C RTT101P47050 842 aa2.77□□□□□ -1.97
AFB1YLR040C COS10P52924 374 aa2.77□□□□□ -1.97
AFB1YLR040C YGR127WP53275 312 aa2.77□□□□□ -1.97
AFB1YLR040C SVL3Q03088 825 aaKnown RBP2.77□□□□□ -1.97
AFB1YLR040C RLI1Q03195 608 aaKnown RBP2.77□□□□□ -1.97
AFB1YLR040C YDL057WQ07379 328 aa2.77□□□□□ -1.97
AFB1YLR040C YDR056CQ12025 205 aa2.77□□□□□ -1.97
AFB1YLR040C GDH1P07262 454 aaKnown RBP2.76□□□□□ -1.97
AFB1YLR040C APE1P14904 514 aa2.76□□□□□ -1.97
AFB1YLR040C AMD1P15274 810 aaKnown RBP2.76□□□□□ -1.97
AFB1YLR040C MCK1P21965 375 aaKnown RBP2.76□□□□□ -1.97
AFB1YLR040C ELO2P25358 347 aa2.76□□□□□ -1.97
AFB1YLR040C DPB3P27344 201 aa2.76□□□□□ -1.97
AFB1YLR040C AGA1P32323 725 aa2.76□□□□□ -1.97
AFB1YLR040C NDC1P32500 655 aa2.76□□□□□ -1.97
AFB1YLR040C MTC4P38335 694 aaKnown RBP2.76□□□□□ -1.97
AFB1YLR040C MDM31P38880 579 aa2.76□□□□□ -1.97
AFB1YLR040C YHR218WP38899 603 aa2.76□□□□□ -1.97
AFB1YLR040C AFG3P39925 761 aa2.76□□□□□ -1.97
AFB1YLR040C CSM2P40465 213 aa2.76□□□□□ -1.97
AFB1YLR040C YDL186WP48568 277 aa2.76□□□□□ -1.97
AFB1YLR040C YGL082WP53155 381 aa2.76□□□□□ -1.97
AFB1YLR040C SYO1Q07395 620 aa2.76□□□□□ -1.97
AFB1YLR040C CDC45Q08032 650 aa2.76□□□□□ -1.97
AFB1YLR040C PPT2Q12036 173 aa2.76□□□□□ -1.97
AFB1YLR040C HUA2Q12134 243 aa2.76□□□□□ -1.97
AFB1YLR040C SGS1P35187 1447 aa2.76□□□□□ -1.97
AFB1YLR040C RAD52P06778 471 aaKnown RBP2.75□□□□□ -1.97
AFB1YLR040C PEP4P07267 405 aaKnown RBP2.75□□□□□ -1.97
AFB1YLR040C EST1P17214 699 aaPredicted RBP2.75□□□□□ -1.97
AFB1YLR040C ART10P18634 518 aaKnown RBP2.75□□□□□ -1.97
AFB1YLR040C SGF29P25554 259 aa2.75□□□□□ -1.97
AFB1YLR040C BUD14P27637 709 aa2.75□□□□□ -1.97
AFB1YLR040C SPC110P32380 944 aa2.75□□□□□ -1.97
AFB1YLR040C YKL023WP36103 277 aaKnown RBP2.75□□□□□ -1.97
AFB1YLR040C CIN4P39110 191 aa2.75□□□□□ -1.97
AFB1YLR040C SGN1P40561 250 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
AFB1YLR040C SCD6P45978 349 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
AFB1YLR040C YGR126WP53274 230 aa2.75□□□□□ -1.97
AFB1YLR040C IPI3P53877 555 aa2.75□□□□□ -1.97
AFB1YLR040C SLD5Q03406 294 aa2.75□□□□□ -1.97
AFB1YLR040C ERP1Q05359 219 aaKnown RBP2.75□□□□□ -1.97
AFB1YLR040C COQ9Q05779 260 aa2.75□□□□□ -1.97
AFB1YLR040C BNA5Q05979 453 aa2.75□□□□□ -1.97
AFB1YLR040C YEH1Q07804 573 aa2.75□□□□□ -1.97
AFB1YLR040C SDH5Q08230 162 aa2.75□□□□□ -1.97
AFB1YLR040C YOR365CQ08844 703 aa2.75□□□□□ -1.97
AFB1YLR040C FMP40Q08968 688 aaPredicted RBP2.75□□□□□ -1.97
AFB1YLR040C NMD4Q12129 218 aa2.75□□□□□ -1.97
AFB1YLR040C AYT1Q12226 474 aa2.75□□□□□ -1.97
AFB1YLR040C SET6Q12529 373 aa2.75□□□□□ -1.97
AFB1YLR040C YPT6Q99260 215 aa2.75□□□□□ -1.97
AFB1YLR040C SUC2P00724 532 aa2.74□□□□□ -1.97
AFB1YLR040C SAN1P22470 610 aa2.74□□□□□ -1.97
AFB1YLR040C CPR3P25719 182 aa2.74□□□□□ -1.97
AFB1YLR040C PAH1P32567 862 aa2.74□□□□□ -1.97
AFB1YLR040C PTR2P32901 601 aa2.74□□□□□ -1.97
AFB1YLR040C YNK1P36010 153 aaKnown RBP2.74□□□□□ -1.97
AFB1YLR040C YHR210CP38893 341 aa2.74□□□□□ -1.97
AFB1YLR040C ROK1P45818 564 aaPredicted RBP2.74□□□□□ -1.97
AFB1YLR040C UPF3P48412 387 aaKnown RBP2.74□□□□□ -1.97
AFB1YLR040C NOP58Q12499 511 aaKnown RBP2.74□□□□□ -1.97
AFB1YLR040C HSH49Q99181 213 aaPredicted RBP2.74□□□□□ -1.97
AFB1YLR040C HEM2P05373 342 aa2.73□□□□□ -1.97
AFB1YLR040C MTF1P14908 341 aaKnown RBP2.73□□□□□ -1.97
AFB1YLR040C AAC3P18238 307 aa2.73□□□□□ -1.97
AFB1YLR040C FRE1P32791 686 aa2.73□□□□□ -1.97
AFB1YLR040C YOX1P34161 385 aa2.73□□□□□ -1.97
AFB1YLR040C FLC2P39719 783 aa2.73□□□□□ -1.97
AFB1YLR040C NOP16P40007 231 aaKnown RBP2.73□□□□□ -1.97
AFB1YLR040C YJL213WP40896 331 aa2.73□□□□□ -1.97
AFB1YLR040C YJR154WP47181 346 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms