RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W AFI1Q99222 893 aa5.35□□□□□ -1.55
SPC42YKL042W YMR085WP0CF18 432 aa5.34□□□□□ -1.55
SPC42YKL042W SNF3P10870 884 aa5.34□□□□□ -1.55
SPC42YKL042W RPB8P20436 146 aa5.34□□□□□ -1.55
SPC42YKL042W ELO2P25358 347 aa5.34□□□□□ -1.55
SPC42YKL042W HXT3P32466 567 aaKnown RBP5.34□□□□□ -1.55
SPC42YKL042W UBA4P38820 440 aa5.34□□□□□ -1.55
SPC42YKL042W IDP3P53982 420 aaKnown RBP5.34□□□□□ -1.55
SPC42YKL042W RSC9Q03124 581 aa5.34□□□□□ -1.55
SPC42YKL042W ARP10Q04549 284 aa5.34□□□□□ -1.55
SPC42YKL042W ROY1Q04847 553 aa5.34□□□□□ -1.55
SPC42YKL042W RBS1Q05672 457 aaKnown RBP5.34□□□□□ -1.55
SPC42YKL042W YDL057WQ07379 328 aa5.34□□□□□ -1.55
SPC42YKL042W GAL4P04386 881 aa5.33□□□□□ -1.56
SPC42YKL042W RPL31BP0C2H9 113 aaKnown RBP5.33□□□□□ -1.56
SPC42YKL042W HCS1P34243 683 aa5.33□□□□□ -1.56
SPC42YKL042W YIL060WP40519 144 aa5.33□□□□□ -1.56
SPC42YKL042W ZIM17P42844 174 aa5.33□□□□□ -1.56
SPC42YKL042W AIM22P47051 409 aa5.33□□□□□ -1.56
SPC42YKL042W PYK2P52489 506 aaKnown RBP5.33□□□□□ -1.56
SPC42YKL042W DUG3P53871 357 aa5.33□□□□□ -1.56
SPC42YKL042W MCP2Q06567 569 aa5.33□□□□□ -1.56
SPC42YKL042W ISN1Q99312 450 aa5.33□□□□□ -1.56
SPC42YKL042W APE1P14904 514 aa5.32□□□□□ -1.56
SPC42YKL042W URA7P28274 579 aaKnown RBP5.32□□□□□ -1.56
SPC42YKL042W TFB1P32776 642 aa5.32□□□□□ -1.56
SPC42YKL042W ROT2P38138 954 aa5.32□□□□□ -1.56
SPC42YKL042W VRG4P40107 337 aa5.32□□□□□ -1.56
SPC42YKL042W ATF1P40353 525 aa5.32□□□□□ -1.56
SPC42YKL042W ALK1P43633 760 aaKnown RBP5.32□□□□□ -1.56
SPC42YKL042W SNG1P46950 547 aa5.32□□□□□ -1.56
SPC42YKL042W VPS25P47142 202 aa5.32□□□□□ -1.56
SPC42YKL042W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
SPC42YKL042W PGK1P00560 416 aaKnown RBP5.31□□□□□ -1.56
SPC42YKL042W OPI1P21957 404 aa5.31□□□□□ -1.56
SPC42YKL042W PPH22P23595 377 aa5.31□□□□□ -1.56
SPC42YKL042W TUL1P36096 758 aa5.31□□□□□ -1.56
SPC42YKL042W YKL023WP36103 277 aaKnown RBP5.31□□□□□ -1.56
SPC42YKL042W JEM1P40358 645 aa5.31□□□□□ -1.56
SPC42YKL042W ULP2P40537 1034 aaPredicted RBP5.31□□□□□ -1.56
SPC42YKL042W HXT9P40885 567 aa5.31□□□□□ -1.56
SPC42YKL042W COP1P53622 1201 aaKnown RBP5.31□□□□□ -1.56
SPC42YKL042W VPS9P54787 451 aa5.31□□□□□ -1.56
SPC42YKL042W ERG13P54839 491 aaKnown RBP5.31□□□□□ -1.56
SPC42YKL042W YVH1Q02256 364 aaKnown RBP5.31□□□□□ -1.56
SPC42YKL042W KAP120Q02932 1032 aa5.31□□□□□ -1.56
SPC42YKL042W YMR160WQ03823 816 aa5.31□□□□□ -1.56
SPC42YKL042W CAC2Q04199 468 aa5.31□□□□□ -1.56
SPC42YKL042W YDL218WQ07629 317 aa5.31□□□□□ -1.56
SPC42YKL042W FMP45Q07651 309 aa5.31□□□□□ -1.56
SPC42YKL042W RDR1Q08904 546 aa5.31□□□□□ -1.56
SPC42YKL042W EDE1P34216 1381 aa5.3□□□□□ -1.56
SPC42YKL042W PEP4P07267 405 aaKnown RBP5.3□□□□□ -1.56
SPC42YKL042W MDH1P17505 334 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SPC42YKL042W PRP2P20095 876 aaPredicted RBP5.3□□□□□ -1.56
SPC42YKL042W PEX2P32800 271 aa5.3□□□□□ -1.56
SPC42YKL042W SHP1P34223 423 aa5.3□□□□□ -1.56
SPC42YKL042W APE4P38821 490 aa5.3□□□□□ -1.56
SPC42YKL042W NET1P47035 1189 aa5.3□□□□□ -1.56
SPC42YKL042W PKP2P53170 491 aa5.3□□□□□ -1.56
SPC42YKL042W SMM1P53720 384 aaKnown RBP5.3□□□□□ -1.56
SPC42YKL042W VTC3Q02725 835 aa5.3□□□□□ -1.56
SPC42YKL042W TAP42Q04372 366 aa5.3□□□□□ -1.56
SPC42YKL042W THP1Q08231 455 aa5.3□□□□□ -1.56
SPC42YKL042W NCE102Q12207 173 aaRIP-Chip data5.3□□□□□ -1.56not detected
SPC42YKL042W RAV1P47104 1357 aa5.29□□□□□ -1.56
SPC42YKL042W CBP1P07252 654 aa5.29□□□□□ -1.56
SPC42YKL042W COR1P07256 457 aa5.29□□□□□ -1.56
SPC42YKL042W ERV1P27882 189 aa5.29□□□□□ -1.56
SPC42YKL042W RAD14P28519 371 aa5.29□□□□□ -1.56
SPC42YKL042W RML2P32611 393 aa5.29□□□□□ -1.56
SPC42YKL042W ECM32P32644 1121 aaKnown RBP5.29□□□□□ -1.56
SPC42YKL042W YME2P32843 850 aa5.29□□□□□ -1.56
SPC42YKL042W TOM71P38825 639 aaKnown RBP5.29□□□□□ -1.56
SPC42YKL042W YHR210CP38893 341 aa5.29□□□□□ -1.56
SPC42YKL042W ATG27P46989 271 aa5.29□□□□□ -1.56
SPC42YKL042W YPT11P48559 417 aa5.29□□□□□ -1.56
SPC42YKL042W GYL1Q04322 720 aa5.29□□□□□ -1.56
SPC42YKL042W SOV1Q04748 898 aa5.29□□□□□ -1.56
SPC42YKL042W POS5Q06892 414 aa5.29□□□□□ -1.56
SPC42YKL042W CRC1Q12289 327 aa5.29□□□□□ -1.56
SPC42YKL042W YAP1P19880 650 aaKnown RBP5.28□□□□□ -1.56
SPC42YKL042W CPR2P23285 205 aa5.28□□□□□ -1.56
SPC42YKL042W SPB1P25582 841 aaPredicted RBP5.28□□□□□ -1.56
SPC42YKL042W AFG1P32317 509 aa5.28□□□□□ -1.56
SPC42YKL042W MBB1P39534 108 aa5.28□□□□□ -1.56
SPC42YKL042W PHO90P39535 881 aa5.28□□□□□ -1.56
SPC42YKL042W YIL024CP40543 189 aa5.28□□□□□ -1.56
SPC42YKL042W CFD1P40558 293 aa5.28□□□□□ -1.56
SPC42YKL042W CAK1P43568 368 aaPredicted RBP5.28□□□□□ -1.56
SPC42YKL042W TCB2P48231 1178 aa5.28□□□□□ -1.56
SPC42YKL042W YGL108CP53139 140 aa5.28□□□□□ -1.56
SPC42YKL042W SOL4P53315 255 aa5.28□□□□□ -1.56
SPC42YKL042W SHR3Q02774 210 aa5.28□□□□□ -1.56
SPC42YKL042W LGE1Q02796 332 aaKnown RBP5.28□□□□□ -1.56
SPC42YKL042W CTL1Q03220 320 aaKnown RBP5.28□□□□□ -1.56
SPC42YKL042W DON1Q05610 365 aa5.28□□□□□ -1.56
SPC42YKL042W PDH1Q12428 516 aaKnown RBP5.28□□□□□ -1.56
SPC42YKL042W SPS4P09937 338 aa5.27□□□□□ -1.57
SPC42YKL042W MNE1P24720 663 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms