RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W ERR3P42222 437 aa5.37□□□□□ -1.55
CBF1YJR060W RRT5P43607 289 aa5.37□□□□□ -1.55
CBF1YJR060W RPS10BP46784 105 aaKnown RBP5.37□□□□□ -1.55
CBF1YJR060W SNG1P46950 547 aa5.37□□□□□ -1.55
CBF1YJR060W NUP84P52891 726 aa5.37□□□□□ -1.55
CBF1YJR060W FLC3P53121 802 aa5.37□□□□□ -1.55
CBF1YJR060W ENT5Q03769 411 aaKnown RBP5.37□□□□□ -1.55
CBF1YJR060W INP2Q03824 705 aa5.37□□□□□ -1.55
CBF1YJR060W HLR1Q04429 423 aa5.37□□□□□ -1.55
CBF1YJR060W TDA9Q04545 1251 aa5.37□□□□□ -1.55
CBF1YJR060W ENT2Q05785 613 aa5.37□□□□□ -1.55
CBF1YJR060W ECI1Q05871 280 aa5.37□□□□□ -1.55
CBF1YJR060W BLS1Q06071 122 aa5.37□□□□□ -1.55
CBF1YJR060W YSH1Q06224 779 aaPredicted RBP5.37□□□□□ -1.55
CBF1YJR060W RPS10AQ08745 105 aaPredicted RBP5.37□□□□□ -1.55
CBF1YJR060W YOR387CQ08910 206 aa5.37□□□□□ -1.55
CBF1YJR060W RIO1Q12196 484 aaKnown RBP5.37□□□□□ -1.55
CBF1YJR060W RAD10P06838 210 aa5.36□□□□□ -1.55
CBF1YJR060W DAL81P21657 970 aa5.36□□□□□ -1.55
CBF1YJR060W CNS1P33313 385 aa5.36□□□□□ -1.55
CBF1YJR060W MSG5P38590 489 aa5.36□□□□□ -1.55
CBF1YJR060W DIA4P38705 446 aaPredicted RBP5.36□□□□□ -1.55
CBF1YJR060W OTU2P38747 307 aaKnown RBP5.36□□□□□ -1.55
CBF1YJR060W FMO1P38866 432 aa5.36□□□□□ -1.55
CBF1YJR060W MSS4P38994 779 aa5.36□□□□□ -1.55
CBF1YJR060W CCT4P39078 528 aaKnown RBP5.36□□□□□ -1.55
CBF1YJR060W ERG10P41338 398 aaKnown RBP5.36□□□□□ -1.55
CBF1YJR060W PFA3P42836 336 aa5.36□□□□□ -1.55
CBF1YJR060W PYK2P52489 506 aaKnown RBP5.36□□□□□ -1.55
CBF1YJR060W TRM112P53738 135 aaPredicted RBP5.36□□□□□ -1.55
CBF1YJR060W MOT3P54785 490 aaKnown RBP5.36□□□□□ -1.55
CBF1YJR060W VPS60Q03390 229 aa5.36□□□□□ -1.55
CBF1YJR060W MUS81Q04149 632 aaPredicted RBP5.36□□□□□ -1.55
CBF1YJR060W VTI1Q04338 217 aa5.36□□□□□ -1.55
CBF1YJR060W ASM4Q05166 528 aa5.36□□□□□ -1.55
CBF1YJR060W YDR278CQ05612 105 aa5.36□□□□□ -1.55
CBF1YJR060W AFI1Q99222 893 aa5.36□□□□□ -1.55
CBF1YJR060W PAP1P29468 568 aaKnown RBP5.35□□□□□ -1.55
CBF1YJR060W NGG1P32494 702 aa5.35□□□□□ -1.55
CBF1YJR060W GCG1P32656 232 aaKnown RBP5.35□□□□□ -1.55
CBF1YJR060W BEM3P32873 1128 aa5.35□□□□□ -1.55
CBF1YJR060W PXA2P34230 853 aa5.35□□□□□ -1.55
CBF1YJR060W APM3P38153 483 aa5.35□□□□□ -1.55
CBF1YJR060W POP4P38336 279 aa5.35□□□□□ -1.55
CBF1YJR060W VHR1P40522 640 aa5.35□□□□□ -1.55
CBF1YJR060W IST3P40565 148 aaPredicted RBP5.35□□□□□ -1.55
CBF1YJR060W IRC5P43610 853 aa5.35□□□□□ -1.55
CBF1YJR060W RMD8P43620 662 aa5.35□□□□□ -1.55
CBF1YJR060W DLD2P46681 530 aaKnown RBP5.35□□□□□ -1.55
CBF1YJR060W YTP1P53584 459 aa5.35□□□□□ -1.55
CBF1YJR060W GTR1Q00582 310 aa5.35□□□□□ -1.55
CBF1YJR060W UTP6Q02354 440 aaKnown RBP5.35□□□□□ -1.55
CBF1YJR060W SLU7Q02775 382 aaKnown RBP5.35□□□□□ -1.55
CBF1YJR060W INA17Q02888 182 aa5.35□□□□□ -1.55
CBF1YJR060W URH1Q04179 340 aa5.35□□□□□ -1.55
CBF1YJR060W YPS7Q06325 596 aa5.35□□□□□ -1.55
CBF1YJR060W NDD1Q08887 554 aa5.35□□□□□ -1.55
CBF1YJR060W PGC1Q08959 321 aa5.35□□□□□ -1.55
CBF1YJR060W HOS1Q12214 470 aa5.35□□□□□ -1.55
CBF1YJR060W LAS17Q12446 633 aa5.35□□□□□ -1.55
CBF1YJR060W HOM2P13663 365 aaKnown RBP5.34□□□□□ -1.55
CBF1YJR060W FPR1P20081 114 aaKnown RBP5.34□□□□□ -1.55
CBF1YJR060W PMI40P29952 429 aaKnown RBP5.34□□□□□ -1.55
CBF1YJR060W HXT3P32466 567 aaKnown RBP5.34□□□□□ -1.55
CBF1YJR060W KAR9P32526 644 aa5.34□□□□□ -1.55
CBF1YJR060W RRP1P35178 278 aaPredicted RBP5.34□□□□□ -1.55
CBF1YJR060W OLA1P38219 394 aaKnown RBP5.34□□□□□ -1.55
CBF1YJR060W PPE1P38796 400 aa5.34□□□□□ -1.55
CBF1YJR060W SCS2P40075 244 aaKnown RBP5.34□□□□□ -1.55
CBF1YJR060W OSW5P40219 148 aa5.34□□□□□ -1.55
CBF1YJR060W ROK1P45818 564 aaPredicted RBP5.34□□□□□ -1.55
CBF1YJR060W PRP31P49704 494 aaPredicted RBP5.34□□□□□ -1.55
CBF1YJR060W NMA2P53204 395 aa5.34□□□□□ -1.55
CBF1YJR060W YGR127WP53275 312 aa5.34□□□□□ -1.55
CBF1YJR060W YPR003CP53394 754 aa5.34□□□□□ -1.55
CBF1YJR060W YNR061CP53747 219 aa5.34□□□□□ -1.55
CBF1YJR060W PRM1P53835 661 aa5.34□□□□□ -1.55
CBF1YJR060W ATG23Q06671 453 aa5.34□□□□□ -1.55
CBF1YJR060W VHS3Q08438 674 aa5.34□□□□□ -1.55
CBF1YJR060W NRT1Q08485 598 aa5.34□□□□□ -1.55
CBF1YJR060W GPR1Q12361 961 aa5.34□□□□□ -1.55
CBF1YJR060W MEX67Q99257 599 aaKnown RBP5.34□□□□□ -1.55
CBF1YJR060W YML002WP0CF17 737 aa5.33□□□□□ -1.56
CBF1YJR060W IMA3P0CW40 589 aa5.33□□□□□ -1.56
CBF1YJR060W IMA4P0CW41 589 aa5.33□□□□□ -1.56
CBF1YJR060W SPO16P17122 198 aa5.33□□□□□ -1.56
CBF1YJR060W ARF2P19146 181 aaKnown RBP5.33□□□□□ -1.56
CBF1YJR060W ACO1P19414 778 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
CBF1YJR060W AAT2P23542 418 aaKnown RBP5.33□□□□□ -1.56
CBF1YJR060W GEX1P25596 615 aa5.33□□□□□ -1.56
CBF1YJR060W HRR25P29295 494 aaKnown RBP5.33□□□□□ -1.56
CBF1YJR060W MCM10P32354 571 aa5.33□□□□□ -1.56
CBF1YJR060W MF(ALPHA)2P32435 120 aa5.33□□□□□ -1.56
CBF1YJR060W DEF1P35732 738 aaKnown RBP5.33□□□□□ -1.56
CBF1YJR060W GEX2P36173 615 aa5.33□□□□□ -1.56
CBF1YJR060W VHC1P38329 1120 aa5.33□□□□□ -1.56
CBF1YJR060W SCC4P40090 624 aa5.33□□□□□ -1.56
CBF1YJR060W ATM1P40416 690 aa5.33□□□□□ -1.56
CBF1YJR060W AIM23P47015 356 aa5.33□□□□□ -1.56
CBF1YJR060W ASI2P53895 289 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms