RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W ACS1Q01574 713 aa4.42□□□□□ -1.7
AVT1YJR001W SEG1Q04279 960 aa4.42□□□□□ -1.7
AVT1YJR001W EMI2Q04409 500 aaKnown RBP4.42□□□□□ -1.7
AVT1YJR001W GIM5Q04493 163 aa4.42□□□□□ -1.7
AVT1YJR001W BOP2Q06150 570 aa4.42□□□□□ -1.7
AVT1YJR001W PUS5Q06244 254 aa4.42□□□□□ -1.7
AVT1YJR001W NDE2Q07500 545 aa4.42□□□□□ -1.7
AVT1YJR001W SNA4Q07549 140 aa4.42□□□□□ -1.7
AVT1YJR001W SIL1Q08199 421 aa4.42□□□□□ -1.7
AVT1YJR001W NOP12Q08208 459 aaKnown RBP4.42□□□□□ -1.7
AVT1YJR001W YPR015CQ12531 247 aa4.42□□□□□ -1.7
AVT1YJR001W RAD61Q99359 647 aa4.42□□□□□ -1.7
AVT1YJR001W PDE2P06776 526 aa4.42□□□□□ -1.7
AVT1YJR001W ARG80P07249 177 aa4.42□□□□□ -1.7
AVT1YJR001W WHI2P12611 486 aa4.42□□□□□ -1.7
AVT1YJR001W TAL1P15019 335 aaKnown RBP4.42□□□□□ -1.7
AVT1YJR001W DAL81P21657 970 aa4.42□□□□□ -1.7
AVT1YJR001W PTP1P25044 335 aa4.42□□□□□ -1.7
AVT1YJR001W NFS1P25374 497 aa4.42□□□□□ -1.7
AVT1YJR001W TYE7P33122 291 aaPredicted RBP4.42□□□□□ -1.7
AVT1YJR001W VID24P38263 362 aa4.42□□□□□ -1.7
AVT1YJR001W SWC5P38326 303 aa4.42□□□□□ -1.7
AVT1YJR001W LIN1P38852 340 aaPredicted RBP4.42□□□□□ -1.7
AVT1YJR001W GPB2P39717 880 aa4.42□□□□□ -1.7
AVT1YJR001W UTP25P40498 721 aaKnown RBP4.42□□□□□ -1.7
AVT1YJR001W INP51P40559 946 aaKnown RBP4.42□□□□□ -1.7
AVT1YJR001W LSB6P42951 607 aa4.42□□□□□ -1.7
AVT1YJR001W CAK1P43568 368 aaPredicted RBP4.42□□□□□ -1.7
AVT1YJR001W GLO1P50107 326 aa4.42□□□□□ -1.7
AVT1YJR001W RMR1P53060 241 aa4.42□□□□□ -1.7
AVT1YJR001W COG1P53079 417 aa4.42□□□□□ -1.7
AVT1YJR001W RRP46P53256 223 aaPredicted RBP4.42□□□□□ -1.7
AVT1YJR001W YGR111WP53265 400 aa4.42□□□□□ -1.7
AVT1YJR001W REG1Q00816 1014 aa4.42□□□□□ -1.7
AVT1YJR001W URC2Q04411 772 aa4.42□□□□□ -1.7
AVT1YJR001W CRR1Q05790 422 aa4.42□□□□□ -1.7
AVT1YJR001W YLR455WQ06188 304 aa4.42□□□□□ -1.7
AVT1YJR001W CRD1Q07560 283 aa4.42□□□□□ -1.7
AVT1YJR001W DDC1Q08949 612 aa4.42□□□□□ -1.7
AVT1YJR001W YPL260WQ08977 551 aa4.42□□□□□ -1.7
AVT1YJR001W GIS3Q12418 502 aa4.42□□□□□ -1.7
AVT1YJR001W ATG11Q12527 1178 aa4.42□□□□□ -1.7
AVT1YJR001W RPS17AP02407 136 aaKnown RBP4.41□□□□□ -1.7
AVT1YJR001W RPS24AP0CX31 135 aaKnown RBP4.41□□□□□ -1.7
AVT1YJR001W RPS24BP0CX32 135 aaKnown RBP4.41□□□□□ -1.7
AVT1YJR001W RPS17BP14127 136 aaKnown RBP4.41□□□□□ -1.7
AVT1YJR001W ERG6P25087 383 aaKnown RBP4.41□□□□□ -1.7
AVT1YJR001W SNT1P25357 1226 aa4.41□□□□□ -1.7
AVT1YJR001W IMG2P25642 146 aaPredicted RBP4.41□□□□□ -1.7
AVT1YJR001W RPS7AP26786 190 aaKnown RBP4.41□□□□□ -1.7
AVT1YJR001W LOS1P33418 1100 aaPredicted RBP4.41□□□□□ -1.7
AVT1YJR001W OCT1P35999 772 aa4.41□□□□□ -1.7
AVT1YJR001W TPO5P36029 618 aa4.41□□□□□ -1.7
AVT1YJR001W MRPL37P36532 105 aa4.41□□□□□ -1.7
AVT1YJR001W FZO1P38297 855 aa4.41□□□□□ -1.7
AVT1YJR001W YHR182WP38870 785 aa4.41□□□□□ -1.7
AVT1YJR001W GIM4P40005 111 aaKnown RBP4.41□□□□□ -1.7
AVT1YJR001W IST3P40565 148 aaPredicted RBP4.41□□□□□ -1.7
AVT1YJR001W PGA2P53903 129 aa4.41□□□□□ -1.7
AVT1YJR001W SLT2Q00772 484 aa4.41□□□□□ -1.7
AVT1YJR001W RPA49Q01080 415 aaPredicted RBP4.41□□□□□ -1.7
AVT1YJR001W IRC4Q03036 179 aa4.41□□□□□ -1.7
AVT1YJR001W MRPL1Q04599 285 aa4.41□□□□□ -1.7
AVT1YJR001W BCP1Q06338 283 aa4.41□□□□□ -1.7
AVT1YJR001W MCM21Q06675 368 aa4.41□□□□□ -1.7
AVT1YJR001W RPN8Q08723 338 aaKnown RBP4.41□□□□□ -1.7
AVT1YJR001W UAF30Q08747 228 aa4.41□□□□□ -1.7
AVT1YJR001W SOG2Q08817 791 aa4.41□□□□□ -1.7
AVT1YJR001W ACM1Q08981 209 aa4.41□□□□□ -1.7
AVT1YJR001W SET6Q12529 373 aa4.41□□□□□ -1.7
AVT1YJR001W RPL6BP05739 176 aaKnown RBP4.4□□□□□ -1.7
AVT1YJR001W ARD1P07347 238 aaPredicted RBP4.4□□□□□ -1.7
AVT1YJR001W MATALPHA2P0CY08 210 aa4.4□□□□□ -1.7
AVT1YJR001W HMLALPHA2P0CY09 210 aa4.4□□□□□ -1.7
AVT1YJR001W PCK1P10963 549 aa4.4□□□□□ -1.7
AVT1YJR001W YCR016WP25617 290 aaKnown RBP4.4□□□□□ -1.7
AVT1YJR001W SIN4P32259 974 aa4.4□□□□□ -1.7
AVT1YJR001W AFG1P32317 509 aa4.4□□□□□ -1.7
AVT1YJR001W SEF1P34228 1148 aa4.4□□□□□ -1.7
AVT1YJR001W YKR015CP36111 568 aa4.4□□□□□ -1.7
AVT1YJR001W AKL1P38080 1108 aaKnown RBP4.4□□□□□ -1.7
AVT1YJR001W OSH7P38755 437 aa4.4□□□□□ -1.7
AVT1YJR001W NUP60P39705 539 aa4.4□□□□□ -1.7
AVT1YJR001W SSO2P39926 295 aa4.4□□□□□ -1.7
AVT1YJR001W YER184CP39961 794 aa4.4□□□□□ -1.7
AVT1YJR001W YER158CP40095 573 aa4.4□□□□□ -1.7
AVT1YJR001W SHR5P41912 237 aa4.4□□□□□ -1.7
AVT1YJR001W EFM3P47163 339 aa4.4□□□□□ -1.7
AVT1YJR001W AAD10P47182 288 aa4.4□□□□□ -1.7
AVT1YJR001W CSL4P53859 292 aaPredicted RBP4.4□□□□□ -1.7
AVT1YJR001W HEF3P53978 1044 aaKnown RBP4.4□□□□□ -1.7
AVT1YJR001W RPL6AQ02326 176 aaKnown RBP4.4□□□□□ -1.7
AVT1YJR001W LEE1Q02799 301 aaKnown RBP4.4□□□□□ -1.7
AVT1YJR001W YMR114CQ04471 368 aaKnown RBP4.4□□□□□ -1.7
AVT1YJR001W YPS7Q06325 596 aa4.4□□□□□ -1.7
AVT1YJR001W VPS74Q06385 345 aa4.4□□□□□ -1.7
AVT1YJR001W THI22Q06490 572 aa4.4□□□□□ -1.7
AVT1YJR001W GPB1Q08886 897 aa4.4□□□□□ -1.7
AVT1YJR001W ULA1Q12059 462 aa4.4□□□□□ -1.7
AVT1YJR001W MSH5Q12175 901 aa4.4□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms