RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	RPL4B	P49626	362 aa	Known RBP	4.81	□□□□□ -1.64
CPS1	YJL172W	CAF120	P53836	1060 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	MET14	Q02196	202 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	MRPS17	Q03246	237 aa	Predicted RBP	4.81	□□□□□ -1.64
CPS1	YJL172W	GCN5	Q03330	439 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	TIF35	Q04067	274 aa	Known RBP	4.81	□□□□□ -1.64
CPS1	YJL172W	FMP42	Q04991	504 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	YLR455W	Q06188	304 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	SNA4	Q07549	140 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	SGT1	Q08446	395 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	YOR019W	Q99248	730 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	TAO3	P40468	2376 aa		4.81	□□□□□ -1.64
CPS1	YJL172W	GAL10	P04397	699 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	PRP2	P20095	876 aa	Predicted RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	AEP2	P22136	580 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	VMA16	P23968	213 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	MLS1	P30952	554 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	CYS3	P31373	394 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	GYP6	P32806	458 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	YUH1	P35127	236 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	CSG2	P35206	410 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	SPT10	P35208	640 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	GLG1	P36143	616 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	APN2	P38207	520 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	SHE3	P38272	425 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	OSH7	P38755	437 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	DLD3	P39976	496 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	JHD1	P40034	492 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	IRC24	P40580	263 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	YGR012W	P53206	393 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	MPS1	P54199	764 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	PRO2	P54885	456 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	ACS1	Q01574	713 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	EAR1	Q03212	550 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	MMT1	Q03218	510 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	YDR056C	Q12025	205 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	YOR022C	Q12204	715 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	CTF3	Q12748	733 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	YCL001W-B	Q96VH2	84 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	YLR358C	O13565	187 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	RPS17A	P02407	136 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	CAR2	P07991	424 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	PRB1	P09232	635 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	YGL041W-A	P0C5N3	154 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	RPS17B	P14127	136 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	CDC42	P19073	191 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	MIH1	P23748	554 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	DAL2	P25335	343 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	RRT12	P25381	491 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	FUN30	P31380	1131 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	MCM10	P32354	571 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	TPO5	P36029	618 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	SRP72	P38688	640 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	RIM4	P38741	713 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	MTG2	P38860	518 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	CCT6	P39079	546 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	RPS26A	P39938	119 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	RPS26B	P39939	119 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	RSP5	P39940	809 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	SAH1	P39954	449 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	SPF1	P39986	1215 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	UFE1	P41834	346 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	SWP82	P43554	623 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	TYW3	P53177	273 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	YGR111W	P53265	400 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	RCF2	P53721	224 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	ZRG17	P53735	605 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	ISU1	Q03020	165 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	DPB4	Q04603	196 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	ECI1	Q05871	280 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	TDA5	Q06417	326 aa	Known RBP	4.8	□□□□□ -1.64
CPS1	YJL172W	RRT8	Q08219	342 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	DDC1	Q08949	612 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	FLC1	Q08967	793 aa		4.8	□□□□□ -1.64
CPS1	YJL172W	SEM1	O94742	89 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	PHO5	P00635	467 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	SCEI	P03882	235 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	CYT1	P07143	309 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	CHS1	P08004	1131 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	SWI5	P08153	709 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	YER152C	P10356	443 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	POL30	P15873	258 aa	Known RBP	4.79	□□□□□ -1.64
CPS1	YJL172W	PRP9	P19736	530 aa	Known RBP	4.79	□□□□□ -1.64
CPS1	YJL172W	UTR1	P21373	530 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	SFP1	P32432	683 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	CYM1	P32898	989 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	MSN4	P33749	630 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	YKR078W	P36158	585 aa	Known RBP	4.79	□□□□□ -1.64
CPS1	YJL172W	YBR071W	P38243	211 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	RFC3	P38629	340 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
CPS1	YJL172W	SBE22	P38814	852 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	YHR202W	P38887	602 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	OAF1	P39720	1047 aa	Predicted RBP	4.79	□□□□□ -1.64
CPS1	YJL172W	SER3	P40054	469 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	AVT6	P40074	448 aa		4.79	□□□□□ -1.64
CPS1	YJL172W	MMF1	P40185	145 aa	Known RBP	4.79	□□□□□ -1.64
CPS1	YJL172W	CCT7	P42943	550 aa	Known RBP	4.79	□□□□□ -1.64
CPS1	YJL172W	YJR141W	P47172	347 aa	Predicted RBP	4.79	□□□□□ -1.64
CPS1	YJL172W	NAS6	P50086	228 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms