RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W DIB1Q06819 143 aaPredicted RBP3.47□□□□□ -1.85
NSP1YJL041W YPL191CQ08930 360 aa3.47□□□□□ -1.85
NSP1YJL041W FLC1Q08967 793 aa3.47□□□□□ -1.85
NSP1YJL041W HOS1Q12214 470 aa3.47□□□□□ -1.85
NSP1YJL041W NUP192P47054 1683 aa3.47□□□□□ -1.85
NSP1YJL041W RPL4AP10664 362 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W SRV2P17555 526 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W VPS33P20795 691 aa3.46□□□□□ -1.86
NSP1YJL041W UTR1P21373 530 aa3.46□□□□□ -1.86
NSP1YJL041W TFC1P32367 649 aa3.46□□□□□ -1.86
NSP1YJL041W SUI1P32911 108 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W YKL107WP34251 309 aa3.46□□□□□ -1.86
NSP1YJL041W HES1P35843 434 aa3.46□□□□□ -1.86
NSP1YJL041W MAE1P36013 669 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W YKL023WP36103 277 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W UTP30P36144 274 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W MRPL3P36516 390 aa3.46□□□□□ -1.86
NSP1YJL041W RRN10P38204 145 aa3.46□□□□□ -1.86
NSP1YJL041W YBR184WP38299 523 aa3.46□□□□□ -1.86
NSP1YJL041W SRP72P38688 640 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W HRB1P38922 454 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
NSP1YJL041W AVT6P40074 448 aa3.46□□□□□ -1.86
NSP1YJL041W RGI2P40188 164 aa3.46□□□□□ -1.86
NSP1YJL041W PSF2P40359 213 aa3.46□□□□□ -1.86
NSP1YJL041W CCT7P42943 550 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W RPL4BP49626 362 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W ORC5P50874 479 aa3.46□□□□□ -1.86
NSP1YJL041W YGL204CP53089 101 aa3.46□□□□□ -1.86
NSP1YJL041W RRP46P53256 223 aaPredicted RBP3.46□□□□□ -1.86
NSP1YJL041W MPS1P54199 764 aa3.46□□□□□ -1.86
NSP1YJL041W HXT11P54862 567 aa3.46□□□□□ -1.86
NSP1YJL041W YDR541CQ03049 344 aa3.46□□□□□ -1.86
NSP1YJL041W SKY1Q03656 742 aa3.46□□□□□ -1.86
NSP1YJL041W YMR074CQ04773 145 aa3.46□□□□□ -1.86
NSP1YJL041W THI3Q07471 609 aa3.46□□□□□ -1.86
NSP1YJL041W ADR1P07248 1323 aa3.46□□□□□ -1.86
NSP1YJL041W GPM1P00950 247 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W RPS17AP02407 136 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W CPA2P03965 1118 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W INO1P11986 533 aa3.46□□□□□ -1.86
NSP1YJL041W RPS17BP14127 136 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W CHS2P14180 963 aa3.46□□□□□ -1.86
NSP1YJL041W POL3P15436 1097 aa3.46□□□□□ -1.86
NSP1YJL041W EXO70P19658 623 aa3.46□□□□□ -1.86
NSP1YJL041W RNR1P21524 888 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W RNR3P21672 869 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W SLY1P22213 666 aa3.46□□□□□ -1.86
NSP1YJL041W CNB1P25296 175 aa3.46□□□□□ -1.86
NSP1YJL041W SRO9P25567 434 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W CIN8P27895 1000 aa3.46□□□□□ -1.86
NSP1YJL041W HRR25P29295 494 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W ACH1P32316 526 aa3.46□□□□□ -1.86
NSP1YJL041W DPH2P32461 534 aa3.46□□□□□ -1.86
NSP1YJL041W MSS1P32559 526 aaPredicted RBP3.46□□□□□ -1.86
NSP1YJL041W SHP1P34223 423 aa3.46□□□□□ -1.86
NSP1YJL041W VBA5P36172 582 aa3.46□□□□□ -1.86
NSP1YJL041W MRPL15P36523 253 aa3.46□□□□□ -1.86
NSP1YJL041W NOP4P37838 685 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W FIG1P38224 298 aa3.46□□□□□ -1.86
NSP1YJL041W BMT2P38278 337 aa3.46□□□□□ -1.86
NSP1YJL041W FTH1P38310 465 aa3.46□□□□□ -1.86
NSP1YJL041W MMS21P38632 267 aa3.46□□□□□ -1.86
NSP1YJL041W YNG2P38806 282 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W MNN1P39106 762 aa3.46□□□□□ -1.86
NSP1YJL041W YAR028WP39548 234 aa3.46□□□□□ -1.86
NSP1YJL041W IDP2P41939 412 aa3.46□□□□□ -1.86
NSP1YJL041W SLS1P42900 643 aa3.46□□□□□ -1.86
NSP1YJL041W YJR141WP47172 347 aaPredicted RBP3.46□□□□□ -1.86
NSP1YJL041W RAI1P53063 387 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W NSA1P53136 463 aaPredicted RBP3.46□□□□□ -1.86
NSP1YJL041W CUE3P53137 624 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W TNA1P53322 534 aa3.46□□□□□ -1.86
NSP1YJL041W SHR3Q02774 210 aa3.46□□□□□ -1.86
NSP1YJL041W ATP25Q03153 612 aa3.46□□□□□ -1.86
NSP1YJL041W NHX1Q04121 633 aa3.46□□□□□ -1.86
NSP1YJL041W GIS4Q04233 774 aa3.46□□□□□ -1.86
NSP1YJL041W SEG1Q04279 960 aa3.46□□□□□ -1.86
NSP1YJL041W YMR114CQ04471 368 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W ARP10Q04549 284 aa3.46□□□□□ -1.86
NSP1YJL041W COA4Q05809 96 aa3.46□□□□□ -1.86
NSP1YJL041W KAP95Q06142 861 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W NDE2Q07500 545 aa3.46□□□□□ -1.86
NSP1YJL041W LUC7Q07508 261 aaPredicted RBP3.46□□□□□ -1.86
NSP1YJL041W FMP25Q08023 583 aa3.46□□□□□ -1.86
NSP1YJL041W RRP40Q08285 240 aaKnown RBP3.46□□□□□ -1.86
NSP1YJL041W SGT1Q08446 395 aa3.46□□□□□ -1.86
NSP1YJL041W MLH3Q12083 715 aa3.46□□□□□ -1.86
NSP1YJL041W NCB2Q92317 146 aa3.46□□□□□ -1.86
NSP1YJL041W AFI1Q99222 893 aa3.46□□□□□ -1.86
NSP1YJL041W CIT1P00890 479 aa3.45□□□□□ -1.86
NSP1YJL041W TRP3P00937 484 aa3.45□□□□□ -1.86
NSP1YJL041W AI1P03875 834 aa3.45□□□□□ -1.86
NSP1YJL041W TY1A-LR4P0C2I8 440 aaKnown RBP3.45□□□□□ -1.86
NSP1YJL041W TY1A-DR6P0CX70 440 aa3.45□□□□□ -1.86
NSP1YJL041W TY1A-ER1P0CX71 440 aa3.45□□□□□ -1.86
NSP1YJL041W TY1A-LR2P0CX72 440 aa3.45□□□□□ -1.86
NSP1YJL041W TY1A-PLP0CX73 440 aa3.45□□□□□ -1.86
NSP1YJL041W TY1A-JR1P0CX74 440 aa3.45□□□□□ -1.86
NSP1YJL041W TY1A-LR3P0CX75 440 aa3.45□□□□□ -1.86
NSP1YJL041W TY1A-ML2P0CX76 440 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms