RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YOS9Q99220 542 aa3.26□□□□□ -1.89
YIR040CYIR040C SEY1Q99287 776 aa3.26□□□□□ -1.89
YIR040CYIR040C RPO31P04051 1460 aa3.25□□□□□ -1.89
YIR040CYIR040C STE2D6VTK4 431 aa3.25□□□□□ -1.89
YIR040CYIR040C IPP1P00817 287 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C GPH1P06738 902 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C SRD1P09007 221 aa3.25□□□□□ -1.89
YIR040CYIR040C DAL81P21657 970 aa3.25□□□□□ -1.89
YIR040CYIR040C CLB4P24871 460 aa3.25□□□□□ -1.89
YIR040CYIR040C RVS161P25343 265 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C POT1P27796 417 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
YIR040CYIR040C RAD24P32641 659 aa3.25□□□□□ -1.89
YIR040CYIR040C RPT3P33298 428 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C LOS1P33418 1100 aaPredicted RBP3.25□□□□□ -1.89
YIR040CYIR040C SRB2P34162 210 aa3.25□□□□□ -1.89
YIR040CYIR040C KKQ8P36004 724 aa3.25□□□□□ -1.89
YIR040CYIR040C MRX3P38172 270 aa3.25□□□□□ -1.89
YIR040CYIR040C RRP3P38712 501 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C WSS1P38838 269 aa3.25□□□□□ -1.89
YIR040CYIR040C FLC2P39719 783 aa3.25□□□□□ -1.89
YIR040CYIR040C SEC72P39742 193 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C TPA1P40032 644 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C SER3P40054 469 aa3.25□□□□□ -1.89
YIR040CYIR040C RTR1P40084 226 aaPredicted RBP3.25□□□□□ -1.89
YIR040CYIR040C MMF1P40185 145 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C HPM1P40481 377 aa3.25□□□□□ -1.89
YIR040CYIR040C YFH7P43591 353 aa3.25□□□□□ -1.89
YIR040CYIR040C YJL163CP46996 555 aa3.25□□□□□ -1.89
YIR040CYIR040C MPS3P47069 682 aa3.25□□□□□ -1.89
YIR040CYIR040C BNA2P47125 453 aa3.25□□□□□ -1.89
YIR040CYIR040C BRO1P48582 844 aa3.25□□□□□ -1.89
YIR040CYIR040C TAF6P53040 516 aa3.25□□□□□ -1.89
YIR040CYIR040C SNF12P53628 566 aa3.25□□□□□ -1.89
YIR040CYIR040C SQS1P53866 767 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C NUP116Q02630 1113 aa3.25□□□□□ -1.89
YIR040CYIR040C OAZ1Q02803 292 aa3.25□□□□□ -1.89
YIR040CYIR040C IRC4Q03036 179 aa3.25□□□□□ -1.89
YIR040CYIR040C RSN1Q03516 953 aa3.25□□□□□ -1.89
YIR040CYIR040C USA1Q03714 838 aa3.25□□□□□ -1.89
YIR040CYIR040C HMO1Q03973 246 aaKnown RBP3.25□□□□□ -1.89
YIR040CYIR040C RAD30Q04049 632 aa3.25□□□□□ -1.89
YIR040CYIR040C BNA7Q04066 261 aa3.25□□□□□ -1.89
YIR040CYIR040C TMN2Q04562 672 aa3.25□□□□□ -1.89
YIR040CYIR040C GTB1Q04924 702 aa3.25□□□□□ -1.89
YIR040CYIR040C DCR2Q05924 578 aa3.25□□□□□ -1.89
YIR040CYIR040C UTP21Q06078 939 aaPredicted RBP3.25□□□□□ -1.89
YIR040CYIR040C SPO77Q06134 477 aa3.25□□□□□ -1.89
YIR040CYIR040C YLR456WQ06199 204 aa3.25□□□□□ -1.89
YIR040CYIR040C IRC13Q08630 104 aa3.25□□□□□ -1.89
YIR040CYIR040C AKR2Q12013 749 aa3.25□□□□□ -1.89
YIR040CYIR040C GET4Q12125 312 aa3.25□□□□□ -1.89
YIR040CYIR040C HUA2Q12134 243 aa3.25□□□□□ -1.89
YIR040CYIR040C SEM1O94742 89 aa3.24□□□□□ -1.89
YIR040CYIR040C RPL25P04456 142 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C RPS9BP05755 195 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C KIN28P06242 306 aa3.24□□□□□ -1.89
YIR040CYIR040C RAD1P06777 1100 aa3.24□□□□□ -1.89
YIR040CYIR040C ADE3P07245 946 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C MSF1P08425 469 aa3.24□□□□□ -1.89
YIR040CYIR040C RAD18P10862 487 aa3.24□□□□□ -1.89
YIR040CYIR040C TCP1P12612 559 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C APA1P16550 321 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C AAC3P18238 307 aa3.24□□□□□ -1.89
YIR040CYIR040C COX11P19516 300 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C CBP3P21560 335 aa3.24□□□□□ -1.89
YIR040CYIR040C AEP2P22136 580 aa3.24□□□□□ -1.89
YIR040CYIR040C GSY1P23337 708 aa3.24□□□□□ -1.89
YIR040CYIR040C CTR86P25355 563 aa3.24□□□□□ -1.89
YIR040CYIR040C BUD23P25627 275 aaPredicted RBP3.24□□□□□ -1.89
YIR040CYIR040C SEC1P30619 724 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C GPI10P30777 616 aa3.24□□□□□ -1.89
YIR040CYIR040C ATP7P30902 174 aa3.24□□□□□ -1.89
YIR040CYIR040C YKU70P32807 602 aa3.24□□□□□ -1.89
YIR040CYIR040C CYM1P32898 989 aa3.24□□□□□ -1.89
YIR040CYIR040C YKR051WP36142 418 aa3.24□□□□□ -1.89
YIR040CYIR040C GLG1P36143 616 aa3.24□□□□□ -1.89
YIR040CYIR040C ADE17P38009 592 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C PCH2P38126 564 aa3.24□□□□□ -1.89
YIR040CYIR040C SIF2P38262 535 aa3.24□□□□□ -1.89
YIR040CYIR040C NTC20P38302 140 aaPredicted RBP3.24□□□□□ -1.89
YIR040CYIR040C YBR225WP38321 900 aa3.24□□□□□ -1.89
YIR040CYIR040C YHR054CP38780 354 aa3.24□□□□□ -1.89
YIR040CYIR040C LSM12P38828 187 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C RPH1P39956 796 aa3.24□□□□□ -1.89
YIR040CYIR040C YIL001WP40560 513 aa3.24□□□□□ -1.89
YIR040CYIR040C LCB2P40970 561 aa3.24□□□□□ -1.89
YIR040CYIR040C STB1P42845 420 aa3.24□□□□□ -1.89
YIR040CYIR040C TDA10P42938 290 aa3.24□□□□□ -1.89
YIR040CYIR040C GLG2P47011 380 aa3.24□□□□□ -1.89
YIR040CYIR040C RTT101P47050 842 aa3.24□□□□□ -1.89
YIR040CYIR040C IBA57P47158 497 aa3.24□□□□□ -1.89
YIR040CYIR040C IMD4P50094 524 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C UBC9P50623 157 aaPredicted RBP3.24□□□□□ -1.89
YIR040CYIR040C NPY1P53164 384 aa3.24□□□□□ -1.89
YIR040CYIR040C YAP1802P53309 568 aa3.24□□□□□ -1.89
YIR040CYIR040C CNM67P53865 581 aaKnown RBP3.24□□□□□ -1.89
YIR040CYIR040C YKR005CQ02203 525 aa3.24□□□□□ -1.89
YIR040CYIR040C CWC27Q02770 301 aa3.24□□□□□ -1.89
YIR040CYIR040C YPL071CQ02864 156 aa3.24□□□□□ -1.89
YIR040CYIR040C PRM15Q03262 622 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms