RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W CLC1P17891 233 aa2.37□□□□□ -2.03
RPL40AYIL148W KGD1P20967 1014 aaKnown RBP2.37□□□□□ -2.03
RPL40AYIL148W GPI10P30777 616 aa2.37□□□□□ -2.03
RPL40AYIL148W PDR3P33200 976 aa2.37□□□□□ -2.03
RPL40AYIL148W MIC60P36112 540 aa2.37□□□□□ -2.03
RPL40AYIL148W NUP133P36161 1157 aa2.37□□□□□ -2.03
RPL40AYIL148W CBP4P37267 147 aa2.37□□□□□ -2.03
RPL40AYIL148W YPK3P38070 525 aa2.37□□□□□ -2.03
RPL40AYIL148W LAG1P38703 411 aa2.37□□□□□ -2.03
RPL40AYIL148W CCT6P39079 546 aa2.37□□□□□ -2.03
RPL40AYIL148W MET28P40573 187 aa2.37□□□□□ -2.03
RPL40AYIL148W GPD2P41911 440 aaKnown RBP2.37□□□□□ -2.03
RPL40AYIL148W SSU1P41930 458 aa2.37□□□□□ -2.03
RPL40AYIL148W HXT14P42833 540 aa2.37□□□□□ -2.03
RPL40AYIL148W ROK1P45818 564 aaPredicted RBP2.37□□□□□ -2.03
RPL40AYIL148W HOS2P53096 452 aaPredicted RBP2.37□□□□□ -2.03
RPL40AYIL148W CAF130P53280 1122 aaPredicted RBP2.37□□□□□ -2.03
RPL40AYIL148W SCW4P53334 386 aaKnown RBP2.37□□□□□ -2.03
RPL40AYIL148W EAF7P53911 425 aaKnown RBP2.37□□□□□ -2.03
RPL40AYIL148W GLO2Q05584 274 aa2.37□□□□□ -2.03
RPL40AYIL148W YOL159CQ08300 171 aa2.37□□□□□ -2.03
RPL40AYIL148W SEC39Q12745 709 aa2.37□□□□□ -2.03
RPL40AYIL148W RAV1P47104 1357 aa2.36□□□□□ -2.03
RPL40AYIL148W PEP5P12868 1029 aa2.36□□□□□ -2.03
RPL40AYIL148W AIM17P23180 465 aaKnown RBP2.36□□□□□ -2.03
RPL40AYIL148W ROX1P25042 368 aa2.36□□□□□ -2.03
RPL40AYIL148W GID7P25569 745 aa2.36□□□□□ -2.03
RPL40AYIL148W TRS65P32893 560 aa2.36□□□□□ -2.03
RPL40AYIL148W WBP1P33767 430 aaKnown RBP2.36□□□□□ -2.03
RPL40AYIL148W SHP1P34223 423 aa2.36□□□□□ -2.03
RPL40AYIL148W UBA4P38820 440 aa2.36□□□□□ -2.03
RPL40AYIL148W SGN1P40561 250 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
RPL40AYIL148W SAD1P43589 448 aa2.36□□□□□ -2.03
RPL40AYIL148W APT1P49435 187 aaKnown RBP2.36□□□□□ -2.03
RPL40AYIL148W CUL3P53202 744 aa2.36□□□□□ -2.03
RPL40AYIL148W SOL4P53315 255 aa2.36□□□□□ -2.03
RPL40AYIL148W OGG1P53397 376 aaPredicted RBP2.36□□□□□ -2.03
RPL40AYIL148W GIR2Q03768 265 aaPredicted RBP2.36□□□□□ -2.03
RPL40AYIL148W YMR155WQ03795 547 aa2.36□□□□□ -2.03
RPL40AYIL148W PDS5Q04264 1277 aa2.36□□□□□ -2.03
RPL40AYIL148W YLR281CQ05863 155 aa2.36□□□□□ -2.03
RPL40AYIL148W VTA1Q06263 330 aa2.36□□□□□ -2.03
RPL40AYIL148W YLR352WQ06479 807 aa2.36□□□□□ -2.03
RPL40AYIL148W THP1Q08231 455 aa2.36□□□□□ -2.03
RPL40AYIL148W DSE3Q08729 430 aa2.36□□□□□ -2.03
RPL40AYIL148W YPL272CQ08984 517 aa2.36□□□□□ -2.03
RPL40AYIL148W ISA2Q12425 185 aa2.36□□□□□ -2.03
RPL40AYIL148W ARP6Q12509 438 aa2.36□□□□□ -2.03
RPL40AYIL148W RPL42AP0CX27 106 aaKnown RBP2.35□□□□□ -2.03
RPL40AYIL148W RPL42BP0CX28 106 aaKnown RBP2.35□□□□□ -2.03
RPL40AYIL148W RPL3P14126 387 aaKnown RBP2.35□□□□□ -2.03
RPL40AYIL148W SYN8P31377 255 aa2.35□□□□□ -2.03
RPL40AYIL148W MRE11P32829 692 aa2.35□□□□□ -2.03
RPL40AYIL148W NPL6P32832 435 aa2.35□□□□□ -2.03
RPL40AYIL148W REC114P32841 428 aa2.35□□□□□ -2.03
RPL40AYIL148W PMT1P33775 817 aa2.35□□□□□ -2.03
RPL40AYIL148W TIF3P34167 436 aaKnown RBP2.35□□□□□ -2.03
RPL40AYIL148W HCS1P34243 683 aa2.35□□□□□ -2.03
RPL40AYIL148W ASK1P35734 292 aa2.35□□□□□ -2.03
RPL40AYIL148W PHD1P36093 366 aa2.35□□□□□ -2.03
RPL40AYIL148W RKM3P38222 552 aa2.35□□□□□ -2.03
RPL40AYIL148W ERG7P38604 731 aa2.35□□□□□ -2.03
RPL40AYIL148W SMF1P38925 575 aa2.35□□□□□ -2.03
RPL40AYIL148W YEL057CP39983 233 aa2.35□□□□□ -2.03
RPL40AYIL148W PCL6P40038 420 aa2.35□□□□□ -2.03
RPL40AYIL148W MET18P40469 1032 aa2.35□□□□□ -2.03
RPL40AYIL148W AXL1P40851 1208 aa2.35□□□□□ -2.03
RPL40AYIL148W POP1P41812 875 aa2.35□□□□□ -2.03
RPL40AYIL148W PYK2P52489 506 aaKnown RBP2.35□□□□□ -2.03
RPL40AYIL148W RPL15BP54780 204 aaPredicted RBP2.35□□□□□ -2.03
RPL40AYIL148W EKI1Q03764 534 aa2.35□□□□□ -2.03
RPL40AYIL148W RSF1Q05043 376 aa2.35□□□□□ -2.03
RPL40AYIL148W ADE13Q05911 482 aaKnown RBP2.35□□□□□ -2.03
RPL40AYIL148W MRD1Q06106 887 aaKnown RBP2.35□□□□□ -2.03
RPL40AYIL148W RPS10AQ08745 105 aaPredicted RBP2.35□□□□□ -2.03
RPL40AYIL148W YRF1-4O13559 1382 aa2.35□□□□□ -2.03
RPL40AYIL148W RPL31BP0C2H9 113 aaKnown RBP2.34□□□□□ -2.03
RPL40AYIL148W NOP1P15646 327 aaKnown RBP2.34□□□□□ -2.03
RPL40AYIL148W HNM1P19807 563 aa2.34□□□□□ -2.03
RPL40AYIL148W PRD1P25375 712 aa2.34□□□□□ -2.03
RPL40AYIL148W RAD14P28519 371 aa2.34□□□□□ -2.03
RPL40AYIL148W AFG1P32317 509 aa2.34□□□□□ -2.03
RPL40AYIL148W ERG3P32353 365 aa2.34□□□□□ -2.03
RPL40AYIL148W RAD24P32641 659 aa2.34□□□□□ -2.03
RPL40AYIL148W ECM32P32644 1121 aaKnown RBP2.34□□□□□ -2.03
RPL40AYIL148W NFU1P32860 256 aa2.34□□□□□ -2.03
RPL40AYIL148W VPS17P32913 551 aa2.34□□□□□ -2.03
RPL40AYIL148W MTR2P34232 184 aaKnown RBP2.34□□□□□ -2.03
RPL40AYIL148W BNA4P38169 460 aa2.34□□□□□ -2.03
RPL40AYIL148W NTC20P38302 140 aaPredicted RBP2.34□□□□□ -2.03
RPL40AYIL148W PHO90P39535 881 aa2.34□□□□□ -2.03
RPL40AYIL148W HXT9P40885 567 aa2.34□□□□□ -2.03
RPL40AYIL148W RTS2P40962 232 aa2.34□□□□□ -2.03
RPL40AYIL148W RPS10BP46784 105 aaKnown RBP2.34□□□□□ -2.03
RPL40AYIL148W ALT2P52892 507 aa2.34□□□□□ -2.03
RPL40AYIL148W YPL014WQ02606 381 aa2.34□□□□□ -2.03
RPL40AYIL148W SXM1Q04175 944 aaKnown RBP2.34□□□□□ -2.03
RPL40AYIL148W RQC1Q05468 723 aaKnown RBP2.34□□□□□ -2.03
RPL40AYIL148W SNA4Q07549 140 aa2.34□□□□□ -2.03
RPL40AYIL148W YEH2Q07950 538 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms