RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W DAN4P47179 1161 aa11.02□□□□□ -0.64
SIM1YIL123W ARI1P53111 347 aaKnown RBP11.02□□□□□ -0.64
SIM1YIL123W YNR065CP53751 1116 aa11.02□□□□□ -0.64
SIM1YIL123W ECM9Q02202 377 aa11.02□□□□□ -0.64
SIM1YIL123W CCE1Q03702 353 aa11.02□□□□□ -0.64
SIM1YIL123W YDR124WQ04608 324 aa11.02□□□□□ -0.64
SIM1YIL123W SMF3Q12078 473 aaPredicted RBP11.02□□□□□ -0.64
SIM1YIL123W MSS18P08593 268 aa11.01□□□□□ -0.65
SIM1YIL123W ERG6P25087 383 aaKnown RBP11.01□□□□□ -0.65
SIM1YIL123W ROT2P38138 954 aa11.01□□□□□ -0.65
SIM1YIL123W UBA4P38820 440 aa11.01□□□□□ -0.65
SIM1YIL123W STB2P46679 850 aa11.01□□□□□ -0.65
SIM1YIL123W NNF1P47149 201 aa11.01□□□□□ -0.65
SIM1YIL123W YPT32P51996 222 aaKnown RBP11.01□□□□□ -0.65
SIM1YIL123W PML39Q03760 334 aa11.01□□□□□ -0.65
SIM1YIL123W ECM11Q04110 302 aa11.01□□□□□ -0.65
SIM1YIL123W GMC2Q06201 188 aa11.01□□□□□ -0.65
SIM1YIL123W RSC3Q06639 885 aa11.01□□□□□ -0.65
SIM1YIL123W SUC2P00724 532 aa11.01□□□□□ -0.65
SIM1YIL123W UGA1P17649 471 aa11.01□□□□□ -0.65
SIM1YIL123W EPT1P22140 391 aa11.01□□□□□ -0.65
SIM1YIL123W BEM4P39011 633 aa11.01□□□□□ -0.65
SIM1YIL123W SEC27P41811 889 aaKnown RBP11.01□□□□□ -0.65
SIM1YIL123W PTR3P43606 678 aa11.01□□□□□ -0.65
SIM1YIL123W YNL033WP53964 284 aa11.01□□□□□ -0.65
SIM1YIL123W YNL019CP53975 284 aa11.01□□□□□ -0.65
SIM1YIL123W SLF1Q12034 447 aaKnown RBP11.01□□□□□ -0.65
SIM1YIL123W IOC2Q12072 812 aa11.01□□□□□ -0.65
SIM1YIL123W YVC1Q12324 675 aa11.01□□□□□ -0.65
SIM1YIL123W JLP1Q12358 412 aa11.01□□□□□ -0.65
SIM1YIL123W CDC21P06785 304 aa11□□□□□ -0.65
SIM1YIL123W TOP3P13099 656 aa11□□□□□ -0.65
SIM1YIL123W SEC63P14906 663 aa11□□□□□ -0.65
SIM1YIL123W MET8P15807 274 aa11□□□□□ -0.65
SIM1YIL123W RAM1P22007 431 aa11□□□□□ -0.65
SIM1YIL123W NGG1P32494 702 aa11□□□□□ -0.65
SIM1YIL123W CBF5P33322 483 aaKnown RBP RIP-Chip data11□□□□□ -0.65not detected
SIM1YIL123W SEC26P41810 973 aaKnown RBP11□□□□□ -0.65
SIM1YIL123W RSM7P47150 247 aa11□□□□□ -0.65
SIM1YIL123W GTO1P48239 356 aa11□□□□□ -0.65
SIM1YIL123W SWC4P53201 476 aa11□□□□□ -0.65
SIM1YIL123W GPI1P53306 609 aa11□□□□□ -0.65
SIM1YIL123W RAD34Q06665 692 aa11□□□□□ -0.65
SIM1YIL123W CPA1P07258 411 aaKnown RBP10.99□□□□□ -0.65
SIM1YIL123W MRPS28P21771 286 aa10.99□□□□□ -0.65
SIM1YIL123W RVS161P25343 265 aaKnown RBP10.99□□□□□ -0.65
SIM1YIL123W TDP1P38319 544 aa10.99□□□□□ -0.65
SIM1YIL123W DSS1P39112 969 aa10.99□□□□□ -0.65
SIM1YIL123W ECM10P39987 644 aa10.99□□□□□ -0.65
SIM1YIL123W AYR1P40471 297 aa10.99□□□□□ -0.65
SIM1YIL123W YGL176CP46945 554 aa10.99□□□□□ -0.65
SIM1YIL123W SVL3Q03088 825 aaKnown RBP10.99□□□□□ -0.65
SIM1YIL123W SGO1Q08490 590 aa10.99□□□□□ -0.65
SIM1YIL123W PST1Q12355 444 aa10.99□□□□□ -0.65
SIM1YIL123W YKL018C-AQ3E7A7 99 aa10.99□□□□□ -0.65
SIM1YIL123W BCY1P07278 416 aaKnown RBP10.98□□□□□ -0.65
SIM1YIL123W MSS116P15424 664 aaKnown RBP10.98□□□□□ -0.65
SIM1YIL123W FPR1P20081 114 aaKnown RBP10.98□□□□□ -0.65
SIM1YIL123W FUN30P31380 1131 aa10.98□□□□□ -0.65
SIM1YIL123W SDH3P33421 198 aa10.98□□□□□ -0.65
SIM1YIL123W PEX6P33760 1030 aa10.98□□□□□ -0.65
SIM1YIL123W PMT1P33775 817 aa10.98□□□□□ -0.65
SIM1YIL123W MAC1P35192 417 aa10.98□□□□□ -0.65
SIM1YIL123W MRP8P35719 219 aa10.98□□□□□ -0.65
SIM1YIL123W RMA1P36001 430 aaKnown RBP10.98□□□□□ -0.65
SIM1YIL123W MRPL17P36528 281 aa10.98□□□□□ -0.65
SIM1YIL123W FMP32P43557 207 aa10.98□□□□□ -0.65
SIM1YIL123W VMA10P48836 114 aaKnown RBP10.98□□□□□ -0.65
SIM1YIL123W ASI2P53895 289 aa10.98□□□□□ -0.65
SIM1YIL123W AI3P03877 415 aa10.97□□□□□ -0.65
SIM1YIL123W STE3P06783 470 aa10.97□□□□□ -0.65
SIM1YIL123W SWI5P08153 709 aa10.97□□□□□ -0.65
SIM1YIL123W RPS4AP0CX35 261 aaKnown RBP10.97□□□□□ -0.65
SIM1YIL123W RPS4BP0CX36 261 aaKnown RBP10.97□□□□□ -0.65
SIM1YIL123W MRP13P12686 339 aa10.97□□□□□ -0.65
SIM1YIL123W PHO84P25297 587 aaKnown RBP10.97□□□□□ -0.65
SIM1YIL123W SPT16P32558 1035 aaKnown RBP10.97□□□□□ -0.65
SIM1YIL123W DCW1P36091 449 aa10.97□□□□□ -0.65
SIM1YIL123W SLM4P38247 162 aa10.97□□□□□ -0.65
SIM1YIL123W IML3P38265 245 aa10.97□□□□□ -0.65
SIM1YIL123W BMT2P38278 337 aa10.97□□□□□ -0.65
SIM1YIL123W NEM1P38757 446 aa10.97□□□□□ -0.65
SIM1YIL123W FAD1P38913 306 aa10.97□□□□□ -0.65
SIM1YIL123W OSW5P40219 148 aa10.97□□□□□ -0.65
SIM1YIL123W GYP8P43570 497 aa10.97□□□□□ -0.65
SIM1YIL123W NUP85P46673 744 aa10.97□□□□□ -0.65
SIM1YIL123W YGL108CP53139 140 aa10.97□□□□□ -0.65
SIM1YIL123W HST3P53687 447 aa10.97□□□□□ -0.65
SIM1YIL123W IMP4P53941 290 aaKnown RBP10.97□□□□□ -0.65
SIM1YIL123W SDH1Q00711 640 aa10.97□□□□□ -0.65
SIM1YIL123W EFR3Q03653 782 aaKnown RBP10.97□□□□□ -0.65
SIM1YIL123W VHS1Q03785 461 aa10.97□□□□□ -0.65
SIM1YIL123W YOL159CQ08300 171 aa10.97□□□□□ -0.65
SIM1YIL123W ULA1Q12059 462 aa10.97□□□□□ -0.65
SIM1YIL123W RRP42Q12277 265 aaPredicted RBP10.97□□□□□ -0.65
SIM1YIL123W ARG3P05150 338 aa10.96□□□□□ -0.65
SIM1YIL123W RFA2P26754 273 aaKnown RBP10.96□□□□□ -0.65
SIM1YIL123W UGP1P32861 499 aaKnown RBP10.96□□□□□ -0.65
SIM1YIL123W STE5P32917 917 aa10.96□□□□□ -0.65
SIM1YIL123W SKG1P36169 355 aa10.96□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms