RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C SEC53P07283 254 aaKnown RBP3.94□□□□□ -1.78
CUP1-2YHR055C PEP5P12868 1029 aa3.94□□□□□ -1.78
CUP1-2YHR055C KAR3P17119 729 aa3.94□□□□□ -1.78
CUP1-2YHR055C ECM15P35195 104 aa3.94□□□□□ -1.78
CUP1-2YHR055C CIN4P39110 191 aa3.94□□□□□ -1.78
CUP1-2YHR055C LCL3P53153 274 aa3.94□□□□□ -1.78
CUP1-2YHR055C RHO4Q00246 291 aa3.94□□□□□ -1.78
CUP1-2YHR055C RBA50Q04418 439 aa3.94□□□□□ -1.78
CUP1-2YHR055C YKU80Q04437 629 aa3.94□□□□□ -1.78
CUP1-2YHR055C THI20Q08224 551 aa3.94□□□□□ -1.78
CUP1-2YHR055C YPL272CQ08984 517 aa3.94□□□□□ -1.78
CUP1-2YHR055C SPE4Q12455 300 aa3.94□□□□□ -1.78
CUP1-2YHR055C SGF29P25554 259 aa3.93□□□□□ -1.78
CUP1-2YHR055C PAH1P32567 862 aa3.93□□□□□ -1.78
CUP1-2YHR055C APT1P49435 187 aaKnown RBP3.93□□□□□ -1.78
CUP1-2YHR055C ALT2P52892 507 aa3.93□□□□□ -1.78
CUP1-2YHR055C PPT2Q12036 173 aa3.93□□□□□ -1.78
CUP1-2YHR055C RPS2P25443 254 aaKnown RBP3.92□□□□□ -1.78
CUP1-2YHR055C SEF1P34228 1148 aa3.92□□□□□ -1.78
CUP1-2YHR055C NOP4P37838 685 aaKnown RBP3.92□□□□□ -1.78
CUP1-2YHR055C MDM31P38880 579 aa3.92□□□□□ -1.78
CUP1-2YHR055C FLC2P39719 783 aa3.92□□□□□ -1.78
CUP1-2YHR055C NOP16P40007 231 aaKnown RBP3.92□□□□□ -1.78
CUP1-2YHR055C TMA108P40462 946 aa3.92□□□□□ -1.78
CUP1-2YHR055C CSM2P40465 213 aa3.92□□□□□ -1.78
CUP1-2YHR055C VID30P53076 958 aa3.92□□□□□ -1.78
CUP1-2YHR055C DSD1P53095 428 aa3.92□□□□□ -1.78
CUP1-2YHR055C YDL057WQ07379 328 aa3.92□□□□□ -1.78
CUP1-2YHR055C YDR056CQ12025 205 aa3.92□□□□□ -1.78
CUP1-2YHR055C SEM1O94742 89 aa3.91□□□□□ -1.78
CUP1-2YHR055C MTF1P14908 341 aaKnown RBP3.91□□□□□ -1.78
CUP1-2YHR055C EST1P17214 699 aaPredicted RBP3.91□□□□□ -1.78
CUP1-2YHR055C ART10P18634 518 aaKnown RBP3.91□□□□□ -1.78
CUP1-2YHR055C GFD2P25370 566 aaKnown RBP3.91□□□□□ -1.78
CUP1-2YHR055C PTR2P32901 601 aa3.91□□□□□ -1.78
CUP1-2YHR055C SGS1P35187 1447 aa3.91□□□□□ -1.78
CUP1-2YHR055C DHH1P39517 506 aaKnown RBP3.91□□□□□ -1.78
CUP1-2YHR055C ALG5P40350 334 aa3.91□□□□□ -1.78
CUP1-2YHR055C MSC1Q03104 513 aa3.91□□□□□ -1.78
CUP1-2YHR055C NGL3Q03210 505 aa3.91□□□□□ -1.78
CUP1-2YHR055C YEH1Q07804 573 aa3.91□□□□□ -1.78
CUP1-2YHR055C NMD4Q12129 218 aa3.91□□□□□ -1.78
CUP1-2YHR055C CAR1P00812 333 aaKnown RBP3.9□□□□□ -1.79
CUP1-2YHR055C MRS3P10566 314 aa3.9□□□□□ -1.79
CUP1-2YHR055C APE1P14904 514 aa3.9□□□□□ -1.79
CUP1-2YHR055C NDC1P32500 655 aa3.9□□□□□ -1.79
CUP1-2YHR055C IPI3P53877 555 aa3.9□□□□□ -1.79
CUP1-2YHR055C SCW10Q04951 389 aa3.9□□□□□ -1.79
CUP1-2YHR055C RCN2Q12044 265 aa3.9□□□□□ -1.79
CUP1-2YHR055C YBR298C-AQ8TGK4 73 aa3.9□□□□□ -1.79
CUP1-2YHR055C AAC3P18238 307 aa3.89□□□□□ -1.79
CUP1-2YHR055C SAN1P22470 610 aa3.89□□□□□ -1.79
CUP1-2YHR055C SIP2P34164 415 aaKnown RBP3.89□□□□□ -1.79
CUP1-2YHR055C OSH3P38713 996 aaKnown RBP3.89□□□□□ -1.79
CUP1-2YHR055C YHR210CP38893 341 aa3.89□□□□□ -1.79
CUP1-2YHR055C RTT101P47050 842 aa3.89□□□□□ -1.79
CUP1-2YHR055C YJR154WP47181 346 aa3.89□□□□□ -1.79
CUP1-2YHR055C BUD32P53323 261 aa3.89□□□□□ -1.79
CUP1-2YHR055C RPM2Q02773 1202 aa3.89□□□□□ -1.79
CUP1-2YHR055C HCR1Q05775 265 aaKnown RBP3.89□□□□□ -1.79
CUP1-2YHR055C YPT6Q99260 215 aa3.89□□□□□ -1.79
CUP1-2YHR055C MRP13P12686 339 aa3.88□□□□□ -1.79
CUP1-2YHR055C BUD14P27637 709 aa3.88□□□□□ -1.79
CUP1-2YHR055C PEP3P27801 918 aa3.88□□□□□ -1.79
CUP1-2YHR055C REG2P38232 338 aa3.88□□□□□ -1.79
CUP1-2YHR055C CCT6P39079 546 aa3.88□□□□□ -1.79
CUP1-2YHR055C ALK1P43633 760 aaKnown RBP3.88□□□□□ -1.79
CUP1-2YHR055C RBG2P53295 368 aaKnown RBP3.88□□□□□ -1.79
CUP1-2YHR055C YMR087WQ04299 284 aa3.88□□□□□ -1.79
CUP1-2YHR055C SET6Q12529 373 aa3.88□□□□□ -1.79
CUP1-2YHR055C YJR112W-AQ3E743 109 aa3.88□□□□□ -1.79
CUP1-2YHR055C RPL15AP05748 204 aaKnown RBP3.87□□□□□ -1.79
CUP1-2YHR055C PAP1P29468 568 aaKnown RBP3.87□□□□□ -1.79
CUP1-2YHR055C TIF3P34167 436 aaKnown RBP3.87□□□□□ -1.79
CUP1-2YHR055C SHP1P34223 423 aa3.87□□□□□ -1.79
CUP1-2YHR055C VPS52P39904 641 aa3.87□□□□□ -1.79
CUP1-2YHR055C ROK1P45818 564 aaPredicted RBP3.87□□□□□ -1.79
CUP1-2YHR055C YGR066CP53242 292 aa3.87□□□□□ -1.79
CUP1-2YHR055C TOF2Q02208 771 aa3.87□□□□□ -1.79
CUP1-2YHR055C CTI6Q08923 506 aa3.87□□□□□ -1.79
CUP1-2YHR055C NCE102Q12207 173 aaRIP-Chip data3.87□□□□□ -1.79not detected
CUP1-2YHR055C HSH49Q99181 213 aaPredicted RBP3.87□□□□□ -1.79
CUP1-2YHR055C NPR2P39923 615 aa3.86□□□□□ -1.79
CUP1-2YHR055C RPH1P39956 796 aa3.86□□□□□ -1.79
CUP1-2YHR055C YJL213WP40896 331 aa3.86□□□□□ -1.79
CUP1-2YHR055C SCD6P45978 349 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
CUP1-2YHR055C IMD4P50094 524 aaKnown RBP3.86□□□□□ -1.79
CUP1-2YHR055C IMP4P53941 290 aaKnown RBP3.86□□□□□ -1.79
CUP1-2YHR055C IVY1Q04934 453 aa3.86□□□□□ -1.79
CUP1-2YHR055C ERP1Q05359 219 aaKnown RBP3.86□□□□□ -1.79
CUP1-2YHR055C VPS38Q05919 439 aa3.86□□□□□ -1.79
CUP1-2YHR055C THP1Q08231 455 aa3.86□□□□□ -1.79
CUP1-2YHR055C YOR365CQ08844 703 aa3.86□□□□□ -1.79
CUP1-2YHR055C YDL009CQ12210 107 aa3.86□□□□□ -1.79
CUP1-2YHR055C GDH1P07262 454 aaKnown RBP3.85□□□□□ -1.79
CUP1-2YHR055C PEP4P07267 405 aaKnown RBP3.85□□□□□ -1.79
CUP1-2YHR055C EXO70P19658 623 aa3.85□□□□□ -1.79
CUP1-2YHR055C SGV1P23293 657 aaKnown RBP3.85□□□□□ -1.79
CUP1-2YHR055C YCR007CP25354 239 aa3.85□□□□□ -1.79
CUP1-2YHR055C CPR3P25719 182 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms