RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	RSC1	P53236	928 aa		3.18	□□□□□ -1.9
VMA10	YHR039C-A	SCW4	P53334	386 aa	Known RBP	3.18	□□□□□ -1.9
VMA10	YHR039C-A	VTC3	Q02725	835 aa		3.18	□□□□□ -1.9
VMA10	YHR039C-A	YPL068C	Q02749	293 aa		3.18	□□□□□ -1.9
VMA10	YHR039C-A	COQ9	Q05779	260 aa		3.18	□□□□□ -1.9
VMA10	YHR039C-A	CLB3	P24870	427 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	YCP4	P25349	247 aa	Known RBP	3.17	□□□□□ -1.9
VMA10	YHR039C-A	OTU2	P38747	307 aa	Known RBP	3.17	□□□□□ -1.9
VMA10	YHR039C-A	TOM71	P38825	639 aa	Known RBP	3.17	□□□□□ -1.9
VMA10	YHR039C-A	PHO90	P39535	881 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	HXT14	P42833	540 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	STB2	P46679	850 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	YML6	P51998	286 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	RPA49	Q01080	415 aa	Predicted RBP	3.17	□□□□□ -1.9
VMA10	YHR039C-A	TAP42	Q04372	366 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	ARP10	Q04549	284 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	MRPL1	Q04599	285 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	YLR345W	Q06137	509 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	NCE102	Q12207	173 aa	RIP-Chip data	3.17	□□□□□ -1.9	not detected
VMA10	YHR039C-A	SNU66	Q12420	587 aa	Predicted RBP	3.17	□□□□□ -1.9
VMA10	YHR039C-A	YDL007C-A	Q2V2Q0	85 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	ISN1	Q99312	450 aa		3.17	□□□□□ -1.9
VMA10	YHR039C-A	PEP4	P07267	405 aa	Known RBP	3.16	□□□□□ -1.9
VMA10	YHR039C-A	SNF3	P10870	884 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	BUD14	P27637	709 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	DBF4	P32325	704 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	YME1	P32795	747 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	SRP72	P38688	640 aa	Known RBP	3.16	□□□□□ -1.9
VMA10	YHR039C-A	AIM22	P47051	409 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	YPT11	P48559	417 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	SGF73	P53165	657 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	TOF2	Q02208	771 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	PDS5	Q04264	1277 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	RBS1	Q05672	457 aa	Known RBP	3.16	□□□□□ -1.9
VMA10	YHR039C-A	POS5	Q06892	414 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	CDC45	Q08032	650 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	ATX2	Q12067	313 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	SMC6	Q12749	1114 aa		3.16	□□□□□ -1.9
VMA10	YHR039C-A	CBP1	P07252	654 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	PRP2	P20095	876 aa	Predicted RBP	3.15	□□□□□ -1.91
VMA10	YHR039C-A	RPB8	P20436	146 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	SNT1	P25357	1226 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	PXA2	P34230	853 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	SCO2	P38072	301 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	GND1	P38720	489 aa	Known RBP	3.15	□□□□□ -1.91
VMA10	YHR039C-A	YJL068C	P40363	299 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	DLD2	P46681	530 aa	Known RBP	3.15	□□□□□ -1.91
VMA10	YHR039C-A	PKP2	P53170	491 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	DRN1	P53255	507 aa	Known RBP	3.15	□□□□□ -1.91
VMA10	YHR039C-A	YGR126W	P53274	230 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	ARX1	Q03862	593 aa	Known RBP	3.15	□□□□□ -1.91
VMA10	YHR039C-A	MCP2	Q06567	569 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	YLR112W	Q12130	139 aa		3.15	□□□□□ -1.91
VMA10	YHR039C-A	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
VMA10	YHR039C-A	YRF1-4	O13559	1382 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	EDE1	P34216	1381 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	RPL31B	P0C2H9	113 aa	Known RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	YCR051W	P25631	222 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	URA7	P28274	579 aa	Known RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	HXT3	P32466	567 aa	Known RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	PEX5	P35056	612 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	GCS1	P35197	352 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	STB6	P36085	766 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	LRP1	P38801	184 aa	Known RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	YIR016W	P40572	265 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	VMA13	P41807	478 aa	Known RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	SSU1	P41930	458 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	MDV1	P47025	714 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	VPS25	P47142	202 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	CAF130	P53280	1122 aa	Predicted RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	SOL4	P53315	255 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	BNI5	P53890	448 aa	Known RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	SLG1	P54867	378 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	CTL1	Q03220	320 aa	Known RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	RMT2	Q03305	412 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	YMR160W	Q03823	816 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	ERB1	Q04660	807 aa	Known RBP	3.14	□□□□□ -1.91
VMA10	YHR039C-A	VTA1	Q06263	330 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	YDL218W	Q07629	317 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	YOR365C	Q08844	703 aa		3.14	□□□□□ -1.91
VMA10	YHR039C-A	YML133C	Q03099	1374 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	YLL067C	Q07888	1374 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	YLL066C	Q99208	1374 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	APE1	P14904	514 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	CLC1	P17891	233 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	SGV1	P23293	657 aa	Known RBP	3.13	□□□□□ -1.91
VMA10	YHR039C-A	PAP1	P29468	568 aa	Known RBP	3.13	□□□□□ -1.91
VMA10	YHR039C-A	SHP1	P34223	423 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	STV1	P37296	890 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	ROT2	P38138	954 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	LAG1	P38703	411 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	YHR210C	P38893	341 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	ALK1	P43633	760 aa	Known RBP	3.13	□□□□□ -1.91
VMA10	YHR039C-A	SNG1	P46950	547 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	ATG27	P46989	271 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	YVH1	Q02256	364 aa	Known RBP	3.13	□□□□□ -1.91
VMA10	YHR039C-A	NUP100	Q02629	959 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	ROY1	Q04847	553 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	YLR352W	Q06479	807 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	YDL057W	Q07379	328 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms