RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C TIR3P40552 269 aa3.1□□□□□ -1.91
RPN1YHR027C HXT10P43581 546 aa3.1□□□□□ -1.91
RPN1YHR027C VPS62P53285 467 aa3.1□□□□□ -1.91
RPN1YHR027C NGL2Q03264 515 aaKnown RBP3.1□□□□□ -1.91
RPN1YHR027C YML037CQ03703 340 aa3.1□□□□□ -1.91
RPN1YHR027C OXR1Q08952 273 aa3.1□□□□□ -1.91
RPN1YHR027C YLR053CQ12026 108 aa3.1□□□□□ -1.91
RPN1YHR027C SVS1Q12254 260 aa3.1□□□□□ -1.91
RPN1YHR027C SPE4Q12455 300 aa3.1□□□□□ -1.91
RPN1YHR027C COBP00163 385 aa3.09□□□□□ -1.91
RPN1YHR027C PHO5P00635 467 aa3.09□□□□□ -1.91
RPN1YHR027C GCN4P03069 281 aa3.09□□□□□ -1.91
RPN1YHR027C MET17P06106 444 aa3.09□□□□□ -1.91
RPN1YHR027C FBP1P09201 348 aa3.09□□□□□ -1.91
RPN1YHR027C MATALPHA1P0CY06 175 aa3.09□□□□□ -1.91
RPN1YHR027C HMLALPHA1P0CY07 175 aa3.09□□□□□ -1.91
RPN1YHR027C MAS1P10507 462 aa3.09□□□□□ -1.91
RPN1YHR027C PHO8P11491 566 aa3.09□□□□□ -1.91
RPN1YHR027C CCA1P21269 546 aa3.09□□□□□ -1.91
RPN1YHR027C DAL81P21657 970 aa3.09□□□□□ -1.91
RPN1YHR027C RSA4P25382 515 aaKnown RBP3.09□□□□□ -1.91
RPN1YHR027C NDC1P32500 655 aa3.09□□□□□ -1.91
RPN1YHR027C SUL1P38359 859 aa3.09□□□□□ -1.91
RPN1YHR027C DUN1P39009 513 aa3.09□□□□□ -1.91
RPN1YHR027C ERV46P39727 415 aa3.09□□□□□ -1.91
RPN1YHR027C PZF1P39933 429 aa3.09□□□□□ -1.91
RPN1YHR027C ALG8P40351 577 aa3.09□□□□□ -1.91
RPN1YHR027C HXT9P40885 567 aa3.09□□□□□ -1.91
RPN1YHR027C CIN5P40917 295 aa3.09□□□□□ -1.91
RPN1YHR027C SAE2P46946 345 aa3.09□□□□□ -1.91
RPN1YHR027C YJL043WP47053 257 aa3.09□□□□□ -1.91
RPN1YHR027C CPR7P47103 393 aa3.09□□□□□ -1.91
RPN1YHR027C SPT20P50875 604 aa3.09□□□□□ -1.91
RPN1YHR027C RSM27P53305 110 aa3.09□□□□□ -1.91
RPN1YHR027C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
RPN1YHR027C ENT5Q03769 411 aaKnown RBP3.09□□□□□ -1.91
RPN1YHR027C APC4Q04601 652 aa3.09□□□□□ -1.91
RPN1YHR027C MRX10Q05648 414 aa3.09□□□□□ -1.91
RPN1YHR027C THI3Q07471 609 aa3.09□□□□□ -1.91
RPN1YHR027C SNA4Q07549 140 aa3.09□□□□□ -1.91
RPN1YHR027C SLD7Q08457 257 aa3.09□□□□□ -1.91
RPN1YHR027C HAL9Q12180 1030 aa3.09□□□□□ -1.91
RPN1YHR027C PSY3Q12318 242 aa3.09□□□□□ -1.91
RPN1YHR027C HRT3Q12347 344 aa3.09□□□□□ -1.91
RPN1YHR027C SKM1Q12469 655 aa3.09□□□□□ -1.91
RPN1YHR027C MED11Q99278 115 aa3.09□□□□□ -1.91
RPN1YHR027C UBR1P19812 1950 aa3.09□□□□□ -1.91
RPN1YHR027C PHO4P07270 312 aaKnown RBP3.09□□□□□ -1.91
RPN1YHR027C PPH22P23595 377 aa3.09□□□□□ -1.91
RPN1YHR027C DAL1P32375 460 aa3.09□□□□□ -1.91
RPN1YHR027C PHA2P32452 334 aa3.09□□□□□ -1.91
RPN1YHR027C PRP21P32524 280 aaPredicted RBP3.09□□□□□ -1.91
RPN1YHR027C PTM1P32857 523 aa3.09□□□□□ -1.91
RPN1YHR027C UGP1P32861 499 aaKnown RBP3.09□□□□□ -1.91
RPN1YHR027C TOD6P34219 525 aa3.09□□□□□ -1.91
RPN1YHR027C CTP1P38152 299 aa3.09□□□□□ -1.91
RPN1YHR027C YBL086CP38177 466 aa3.09□□□□□ -1.91
RPN1YHR027C SRP72P38688 640 aaKnown RBP3.09□□□□□ -1.91
RPN1YHR027C EGD2P38879 174 aaKnown RBP3.09□□□□□ -1.91
RPN1YHR027C LYS9P38999 446 aa3.09□□□□□ -1.91
RPN1YHR027C YEL020CP39994 560 aa3.09□□□□□ -1.91
RPN1YHR027C IRC8P47046 822 aa3.09□□□□□ -1.91
RPN1YHR027C EFM3P47163 339 aa3.09□□□□□ -1.91
RPN1YHR027C TEP1P53916 434 aa3.09□□□□□ -1.91
RPN1YHR027C MFB1Q04922 465 aa3.09□□□□□ -1.91
RPN1YHR027C YPR078CQ06813 372 aa3.09□□□□□ -1.91
RPN1YHR027C RCL1Q08096 367 aaPredicted RBP3.09□□□□□ -1.91
RPN1YHR027C FMP40Q08968 688 aaPredicted RBP3.09□□□□□ -1.91
RPN1YHR027C GIS3Q12418 502 aa3.09□□□□□ -1.91
RPN1YHR027C TY1A-DR3Q12441 440 aa3.09□□□□□ -1.91
RPN1YHR027C MOT1P32333 1867 aa3.09□□□□□ -1.92
RPN1YHR027C MET6P05694 767 aaKnown RBP3.09□□□□□ -1.92
RPN1YHR027C CAR2P07991 424 aaKnown RBP3.09□□□□□ -1.92
RPN1YHR027C MET2P08465 486 aa3.09□□□□□ -1.92
RPN1YHR027C INO1P11986 533 aa3.09□□□□□ -1.92
RPN1YHR027C FRS1P15624 595 aaKnown RBP3.09□□□□□ -1.92
RPN1YHR027C GIT1P25346 518 aa3.09□□□□□ -1.92
RPN1YHR027C SYP1P25623 870 aaKnown RBP3.09□□□□□ -1.92
RPN1YHR027C VPH1P32563 840 aaKnown RBP3.09□□□□□ -1.92
RPN1YHR027C SPR1P32603 445 aa3.09□□□□□ -1.92
RPN1YHR027C ABD1P32783 436 aaPredicted RBP3.09□□□□□ -1.92
RPN1YHR027C MRPL3P36516 390 aa3.09□□□□□ -1.92
RPN1YHR027C POA1P38218 177 aa3.09□□□□□ -1.92
RPN1YHR027C UBX7P38349 436 aa3.09□□□□□ -1.92
RPN1YHR027C MSC7P38694 644 aa3.09□□□□□ -1.92
RPN1YHR027C APM2P38700 605 aa3.09□□□□□ -1.92
RPN1YHR027C DED81P38707 554 aaKnown RBP3.09□□□□□ -1.92
RPN1YHR027C OSH7P38755 437 aa3.09□□□□□ -1.92
RPN1YHR027C UBP5P39944 805 aa3.09□□□□□ -1.92
RPN1YHR027C YER010CP40011 234 aa3.09□□□□□ -1.92
RPN1YHR027C CHS6P40955 746 aa3.09□□□□□ -1.92
RPN1YHR027C UFE1P41834 346 aa3.09□□□□□ -1.92
RPN1YHR027C REF2P42073 533 aaPredicted RBP3.09□□□□□ -1.92
RPN1YHR027C GNA1P43577 159 aaPredicted RBP3.09□□□□□ -1.92
RPN1YHR027C DUG1P43616 481 aaKnown RBP3.09□□□□□ -1.92
RPN1YHR027C SCY1P53009 804 aa3.09□□□□□ -1.92
RPN1YHR027C PPT1P53043 513 aa3.09□□□□□ -1.92
RPN1YHR027C ERV14P53173 138 aa3.09□□□□□ -1.92
RPN1YHR027C SWC4P53201 476 aa3.09□□□□□ -1.92
RPN1YHR027C SOK2P53438 785 aaPredicted RBP3.09□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms