RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W PMT1P33775 817 aa7.93□□□□□ -1.14
UFD1YGR048W YKL100CP34248 587 aa7.93□□□□□ -1.14
UFD1YGR048W YBR056WP38081 501 aa7.93□□□□□ -1.14
UFD1YGR048W PMC1P38929 1173 aaPredicted RBP7.93□□□□□ -1.14
UFD1YGR048W PEP8P40335 379 aa7.93□□□□□ -1.14
UFD1YGR048W KTR7P40504 517 aa7.93□□□□□ -1.14
UFD1YGR048W DOT5P40553 215 aa7.93□□□□□ -1.14
UFD1YGR048W RGD2P43556 714 aa7.93□□□□□ -1.14
UFD1YGR048W CCT8P47079 568 aaKnown RBP7.93□□□□□ -1.14
UFD1YGR048W PRP24P49960 444 aaKnown RBP7.93□□□□□ -1.14
UFD1YGR048W MNT2P53059 558 aa7.93□□□□□ -1.14
UFD1YGR048W PEX8P53248 589 aa7.93□□□□□ -1.14
UFD1YGR048W CLD1P53264 445 aa7.93□□□□□ -1.14
UFD1YGR048W YPL107WQ02873 248 aa7.93□□□□□ -1.14
UFD1YGR048W NHP10Q03435 203 aa7.93□□□□□ -1.14
UFD1YGR048W SNU56Q03782 492 aaKnown RBP7.93□□□□□ -1.14
UFD1YGR048W VHS1Q03785 461 aa7.93□□□□□ -1.14
UFD1YGR048W SND1Q04007 877 aa7.93□□□□□ -1.14
UFD1YGR048W SUB2Q07478 446 aaKnown RBP7.93□□□□□ -1.14
UFD1YGR048W YEH1Q07804 573 aa7.93□□□□□ -1.14
UFD1YGR048W MUM3Q08750 479 aa7.93□□□□□ -1.14
UFD1YGR048W ULA1Q12059 462 aa7.93□□□□□ -1.14
UFD1YGR048W RPN6Q12377 434 aa7.93□□□□□ -1.14
UFD1YGR048W SET6Q12529 373 aa7.93□□□□□ -1.14
UFD1YGR048W RRP12Q12754 1228 aaKnown RBP7.93□□□□□ -1.14
UFD1YGR048W HSH49Q99181 213 aaPredicted RBP7.93□□□□□ -1.14
UFD1YGR048W CYB2P00175 591 aa7.92□□□□□ -1.14
UFD1YGR048W STE3P06783 470 aa7.92□□□□□ -1.14
UFD1YGR048W RPL3P14126 387 aaKnown RBP7.92□□□□□ -1.14
UFD1YGR048W ABF1P14164 731 aa7.92□□□□□ -1.14
UFD1YGR048W HNM1P19807 563 aa7.92□□□□□ -1.14
UFD1YGR048W RIT1P23796 513 aa7.92□□□□□ -1.14
UFD1YGR048W URA7P28274 579 aaKnown RBP7.92□□□□□ -1.14
UFD1YGR048W DBF20P32328 564 aa7.92□□□□□ -1.14
UFD1YGR048W TOD6P34219 525 aa7.92□□□□□ -1.14
UFD1YGR048W GPX2P38143 162 aa7.92□□□□□ -1.14
UFD1YGR048W CCZ1P38273 704 aa7.92□□□□□ -1.14
UFD1YGR048W PRS2P38620 318 aaKnown RBP7.92□□□□□ -1.14
UFD1YGR048W STB5P38699 743 aa7.92□□□□□ -1.14
UFD1YGR048W BZZ1P38822 633 aa7.92□□□□□ -1.14
UFD1YGR048W YJL206CP39529 758 aa7.92□□□□□ -1.14
UFD1YGR048W PES4P39684 611 aa7.92□□□□□ -1.14
UFD1YGR048W SLX8P40072 274 aa7.92□□□□□ -1.14
UFD1YGR048W CNN1P43618 361 aa7.92□□□□□ -1.14
UFD1YGR048W GPI8P49018 411 aa7.92□□□□□ -1.14
UFD1YGR048W YML6P51998 286 aa7.92□□□□□ -1.14
UFD1YGR048W NBP1P52919 319 aaPredicted RBP7.92□□□□□ -1.14
UFD1YGR048W SRP1Q02821 542 aaKnown RBP7.92□□□□□ -1.14
UFD1YGR048W NGL2Q03264 515 aaKnown RBP7.92□□□□□ -1.14
UFD1YGR048W SNX41Q04053 625 aa7.92□□□□□ -1.14
UFD1YGR048W TY1A-MR1Q04215 440 aa7.92□□□□□ -1.14
UFD1YGR048W PRM6Q04705 352 aa7.92□□□□□ -1.14
UFD1YGR048W CRN1Q06440 651 aa7.92□□□□□ -1.14
UFD1YGR048W DCN1Q12395 269 aa7.92□□□□□ -1.14
UFD1YGR048W SKM1Q12469 655 aa7.92□□□□□ -1.14
UFD1YGR048W DFG16Q99234 619 aa7.92□□□□□ -1.14
UFD1YGR048W RPP1AP05318 106 aaPredicted RBP7.91□□□□□ -1.14
UFD1YGR048W SNF3P10870 884 aa7.91□□□□□ -1.14
UFD1YGR048W DMC1P25453 334 aa7.91□□□□□ -1.14
UFD1YGR048W YCL049CP25577 312 aa7.91□□□□□ -1.14
UFD1YGR048W CSM1P25651 190 aa7.91□□□□□ -1.14
UFD1YGR048W MEI5P32489 222 aa7.91□□□□□ -1.14
UFD1YGR048W UGA4P32837 571 aa7.91□□□□□ -1.14
UFD1YGR048W PTM1P32857 523 aa7.91□□□□□ -1.14
UFD1YGR048W RGT1P32862 1170 aa7.91□□□□□ -1.14
UFD1YGR048W SKG1P36169 355 aa7.91□□□□□ -1.14
UFD1YGR048W GIC1P38785 314 aa7.91□□□□□ -1.14
UFD1YGR048W MLH1P38920 769 aa7.91□□□□□ -1.14
UFD1YGR048W SSN3P39073 555 aa7.91□□□□□ -1.14
UFD1YGR048W MIT1P40002 666 aa7.91□□□□□ -1.14
UFD1YGR048W AGE2P40529 298 aa7.91□□□□□ -1.14
UFD1YGR048W TIR3P40552 269 aa7.91□□□□□ -1.14
UFD1YGR048W SER2P42941 309 aa7.91□□□□□ -1.14
UFD1YGR048W BUD13P46947 266 aaPredicted RBP7.91□□□□□ -1.14
UFD1YGR048W ROM1P53046 1155 aa7.91□□□□□ -1.14
UFD1YGR048W SOK2P53438 785 aaPredicted RBP7.91□□□□□ -1.14
UFD1YGR048W ARE2P53629 642 aaKnown RBP7.91□□□□□ -1.14
UFD1YGR048W DSE4P53753 1117 aa7.91□□□□□ -1.14
UFD1YGR048W NAM8Q00539 523 aaKnown RBP7.91□□□□□ -1.14
UFD1YGR048W YML131WQ03102 365 aa7.91□□□□□ -1.14
UFD1YGR048W RMT2Q03305 412 aa7.91□□□□□ -1.14
UFD1YGR048W SIZ1Q04195 904 aa7.91□□□□□ -1.14
UFD1YGR048W MHR1Q06630 226 aa7.91□□□□□ -1.14
UFD1YGR048W GSH2Q08220 491 aa7.91□□□□□ -1.14
UFD1YGR048W CUE5Q08412 411 aaKnown RBP7.91□□□□□ -1.14
UFD1YGR048W SLD7Q08457 257 aa7.91□□□□□ -1.14
UFD1YGR048W TRM10Q12400 293 aa7.91□□□□□ -1.14
UFD1YGR048W YOR131CQ12486 218 aa7.91□□□□□ -1.14
UFD1YGR048W YBR085C-AO43137 85 aa7.9□□□□□ -1.14
UFD1YGR048W TPK1P06244 397 aa7.9□□□□□ -1.14
UFD1YGR048W SEC53P07283 254 aaKnown RBP7.9□□□□□ -1.14
UFD1YGR048W HOM2P13663 365 aaKnown RBP7.9□□□□□ -1.14
UFD1YGR048W PFK1P16861 987 aaKnown RBP7.9□□□□□ -1.14
UFD1YGR048W YCK1P23291 538 aa7.9□□□□□ -1.14
UFD1YGR048W NTG1P31378 399 aa7.9□□□□□ -1.14
UFD1YGR048W APE2P32454 952 aaKnown RBP7.9□□□□□ -1.14
UFD1YGR048W SDS22P36047 338 aa7.9□□□□□ -1.14
UFD1YGR048W MRPL3P36516 390 aa7.9□□□□□ -1.14
UFD1YGR048W ECM8P38246 354 aa7.9□□□□□ -1.14
UFD1YGR048W PCA1P38360 1216 aa7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms