RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C AUR1P36107 401 aaPredicted RBP2.55□□□□□ -2
SMB1YER029C RPR2P40571 144 aa2.55□□□□□ -2
SMB1YER029C LYS14P40971 790 aa2.55□□□□□ -2
SMB1YER029C FAR3P46671 204 aa2.55□□□□□ -2
SMB1YER029C RTT101P47050 842 aa2.55□□□□□ -2
SMB1YER029C BUD32P53323 261 aa2.55□□□□□ -2
SMB1YER029C SVL3Q03088 825 aaKnown RBP2.55□□□□□ -2
SMB1YER029C YML037CQ03703 340 aa2.55□□□□□ -2
SMB1YER029C SMA2Q04658 369 aa2.55□□□□□ -2
SMB1YER029C BNA5Q05979 453 aa2.55□□□□□ -2
SMB1YER029C PEP4P07267 405 aaKnown RBP2.54□□□□□ -2
SMB1YER029C YCK1P23291 538 aa2.54□□□□□ -2
SMB1YER029C RNA14P25298 677 aaKnown RBP2.54□□□□□ -2
SMB1YER029C ELO2P25358 347 aa2.54□□□□□ -2
SMB1YER029C SGF29P25554 259 aa2.54□□□□□ -2
SMB1YER029C POL4P25615 582 aa2.54□□□□□ -2
SMB1YER029C IMG1P25626 169 aa2.54□□□□□ -2
SMB1YER029C CPR3P25719 182 aa2.54□□□□□ -2
SMB1YER029C PAH1P32567 862 aa2.54□□□□□ -2
SMB1YER029C VPS17P32913 551 aa2.54□□□□□ -2
SMB1YER029C TIF3P34167 436 aaKnown RBP2.54□□□□□ -2
SMB1YER029C MDM31P38880 579 aa2.54□□□□□ -2
SMB1YER029C YHR210CP38893 341 aa2.54□□□□□ -2
SMB1YER029C RPH1P39956 796 aa2.54□□□□□ -2
SMB1YER029C CSM2P40465 213 aa2.54□□□□□ -2
SMB1YER029C SNG1P46950 547 aa2.54□□□□□ -2
SMB1YER029C YJR154WP47181 346 aa2.54□□□□□ -2
SMB1YER029C DUO1P53168 247 aaKnown RBP2.54□□□□□ -2
SMB1YER029C RPC11Q04307 110 aaPredicted RBP2.54□□□□□ -2
SMB1YER029C LUC7Q07508 261 aaPredicted RBP2.54□□□□□ -2
SMB1YER029C SGS1P35187 1447 aa2.53□□□□□ -2
SMB1YER029C SUC2P00724 532 aa2.53□□□□□ -2
SMB1YER029C MRP13P12686 339 aa2.53□□□□□ -2
SMB1YER029C PEP5P12868 1029 aa2.53□□□□□ -2
SMB1YER029C APE1P14904 514 aa2.53□□□□□ -2
SMB1YER029C SEC62P21825 274 aa2.53□□□□□ -2
SMB1YER029C BOS1P25385 244 aa2.53□□□□□ -2
SMB1YER029C YCR022CP25620 114 aa2.53□□□□□ -2
SMB1YER029C BUD14P27637 709 aa2.53□□□□□ -2
SMB1YER029C PRO3P32263 286 aaKnown RBP2.53□□□□□ -2
SMB1YER029C AGA1P32323 725 aa2.53□□□□□ -2
SMB1YER029C SSH4P32343 579 aa2.53□□□□□ -2
SMB1YER029C SPC110P32380 944 aa2.53□□□□□ -2
SMB1YER029C NDC1P32500 655 aa2.53□□□□□ -2
SMB1YER029C RPL32P38061 130 aaKnown RBP2.53□□□□□ -2
SMB1YER029C AVT5P38176 459 aa2.53□□□□□ -2
SMB1YER029C RRP3P38712 501 aaKnown RBP2.53□□□□□ -2
SMB1YER029C OSH3P38713 996 aaKnown RBP2.53□□□□□ -2
SMB1YER029C YEL068CP39977 110 aa2.53□□□□□ -2
SMB1YER029C YJL213WP40896 331 aa2.53□□□□□ -2
SMB1YER029C ALT2P52892 507 aa2.53□□□□□ -2
SMB1YER029C DSD1P53095 428 aa2.53□□□□□ -2
SMB1YER029C LCL3P53153 274 aa2.53□□□□□ -2
SMB1YER029C YGR127WP53275 312 aa2.53□□□□□ -2
SMB1YER029C BOR1P53838 576 aa2.53□□□□□ -2
SMB1YER029C RLI1Q03195 608 aaKnown RBP2.53□□□□□ -2
SMB1YER029C BUD22Q04347 519 aaKnown RBP2.53□□□□□ -2
SMB1YER029C NOP58Q12499 511 aaKnown RBP2.53□□□□□ -2
SMB1YER029C YBR126W-AQ8TGU7 68 aa2.53□□□□□ -2
SMB1YER029C SEM1O94742 89 aa2.52□□□□□ -2.01
SMB1YER029C HEM2P05373 342 aa2.52□□□□□ -2.01
SMB1YER029C RAD52P06778 471 aaKnown RBP2.52□□□□□ -2.01
SMB1YER029C MCK1P21965 375 aaKnown RBP2.52□□□□□ -2.01
SMB1YER029C PRE8P23639 250 aa2.52□□□□□ -2.01
SMB1YER029C YCR007CP25354 239 aa2.52□□□□□ -2.01
SMB1YER029C SAC6P32599 642 aaKnown RBP2.52□□□□□ -2.01
SMB1YER029C YBR144CP34215 104 aa2.52□□□□□ -2.01
SMB1YER029C YKL023WP36103 277 aaKnown RBP2.52□□□□□ -2.01
SMB1YER029C TIF5P38431 405 aaKnown RBP2.52□□□□□ -2.01
SMB1YER029C CIN4P39110 191 aa2.52□□□□□ -2.01
SMB1YER029C YFR016CP43597 1233 aaKnown RBP2.52□□□□□ -2.01
SMB1YER029C ROK1P45818 564 aaPredicted RBP2.52□□□□□ -2.01
SMB1YER029C SCD6P45978 349 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01 RIP-Chip
SMB1YER029C AIM22P47051 409 aa2.52□□□□□ -2.01
SMB1YER029C UPF3P48412 387 aaKnown RBP2.52□□□□□ -2.01
SMB1YER029C DUG3P53871 357 aa2.52□□□□□ -2.01
SMB1YER029C SHR3Q02774 210 aa2.52□□□□□ -2.01
SMB1YER029C SLD5Q03406 294 aa2.52□□□□□ -2.01
SMB1YER029C COQ9Q05779 260 aa2.52□□□□□ -2.01
SMB1YER029C NMD4Q12129 218 aa2.52□□□□□ -2.01
SMB1YER029C AYT1Q12226 474 aa2.52□□□□□ -2.01
SMB1YER029C SET6Q12529 373 aa2.52□□□□□ -2.01
SMB1YER029C GDH1P07262 454 aaKnown RBP2.51□□□□□ -2.01
SMB1YER029C MTF1P14908 341 aaKnown RBP2.51□□□□□ -2.01
SMB1YER029C DPB3P27344 201 aa2.51□□□□□ -2.01
SMB1YER029C FRE1P32791 686 aa2.51□□□□□ -2.01
SMB1YER029C PTR2P32901 601 aa2.51□□□□□ -2.01
SMB1YER029C ICS2P38284 255 aa2.51□□□□□ -2.01
SMB1YER029C MTC4P38335 694 aaKnown RBP2.51□□□□□ -2.01
SMB1YER029C FLC2P39719 783 aa2.51□□□□□ -2.01
SMB1YER029C PTR3P43606 678 aa2.51□□□□□ -2.01
SMB1YER029C YGR126WP53274 230 aa2.51□□□□□ -2.01
SMB1YER029C YMR018WQ04364 514 aa2.51□□□□□ -2.01
SMB1YER029C SYO1Q07395 620 aa2.51□□□□□ -2.01
SMB1YER029C YEH1Q07804 573 aa2.51□□□□□ -2.01
SMB1YER029C SDH5Q08230 162 aa2.51□□□□□ -2.01
SMB1YER029C FMP40Q08968 688 aaPredicted RBP2.51□□□□□ -2.01
SMB1YER029C YLL056CQ12177 298 aa2.51□□□□□ -2.01
SMB1YER029C YDL009CQ12210 107 aa2.51□□□□□ -2.01
SMB1YER029C RPL20AP0CX23 172 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms