RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	VPS52	P39904	641 aa		3.59	□□□□□ -1.83
YEA4	YEL004W	SIP4	P46954	829 aa		3.59	□□□□□ -1.83
YEA4	YEL004W	YGR127W	P53275	312 aa		3.59	□□□□□ -1.83
YEA4	YEL004W	CBK1	P53894	756 aa		3.59	□□□□□ -1.83
YEA4	YEL004W	SHR3	Q02774	210 aa		3.59	□□□□□ -1.83
YEA4	YEL004W	ENT4	Q07872	247 aa		3.59	□□□□□ -1.83
YEA4	YEL004W	CAR1	P00812	333 aa	Known RBP	3.58	□□□□□ -1.84
YEA4	YEL004W	RPL20A	P0CX23	172 aa	Known RBP	3.58	□□□□□ -1.84
YEA4	YEL004W	RPL20B	P0CX24	172 aa	Predicted RBP	3.58	□□□□□ -1.84
YEA4	YEL004W	RRN3	P36070	627 aa		3.58	□□□□□ -1.84
YEA4	YEL004W	NPR2	P39923	615 aa		3.58	□□□□□ -1.84
YEA4	YEL004W	YJR008W	P47085	338 aa		3.58	□□□□□ -1.84
YEA4	YEL004W	LYS4	P49367	693 aa	Predicted RBP	3.58	□□□□□ -1.84
YEA4	YEL004W	EFM6	P53970	246 aa		3.58	□□□□□ -1.84
YEA4	YEL004W	SGV1	P23293	657 aa	Known RBP	3.57	□□□□□ -1.84
YEA4	YEL004W	PRE8	P23639	250 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	BOS1	P25385	244 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	SYN8	P31377	255 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	YKL023W	P36103	277 aa	Known RBP	3.57	□□□□□ -1.84
YEA4	YEL004W	MAL33	P38157	468 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	ICS2	P38284	255 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	IDP2	P41939	412 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	FAR3	P46671	204 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	ARC1	P46672	376 aa	Known RBP	3.57	□□□□□ -1.84
YEA4	YEL004W	SNG1	P46950	547 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	ALT2	P52892	507 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	YGL242C	P53066	181 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	VMS1	Q04311	632 aa	Known RBP	3.57	□□□□□ -1.84
YEA4	YEL004W	SYO1	Q07395	620 aa		3.57	□□□□□ -1.84
YEA4	YEL004W	HEM2	P05373	342 aa		3.56	□□□□□ -1.84
YEA4	YEL004W	AMD1	P15274	810 aa	Known RBP	3.56	□□□□□ -1.84
YEA4	YEL004W	KGD1	P20967	1014 aa	Known RBP	3.56	□□□□□ -1.84
YEA4	YEL004W	PUP3	P25451	205 aa	Known RBP	3.56	□□□□□ -1.84
YEA4	YEL004W	SAC6	P32599	642 aa	Known RBP	3.56	□□□□□ -1.84
YEA4	YEL004W	YBL055C	P34220	418 aa	Predicted RBP	3.56	□□□□□ -1.84
YEA4	YEL004W	RLI1	Q03195	608 aa	Known RBP	3.56	□□□□□ -1.84
YEA4	YEL004W	RAD30	Q04049	632 aa		3.56	□□□□□ -1.84
YEA4	YEL004W	YDL009C	Q12210	107 aa		3.56	□□□□□ -1.84
YEA4	YEL004W	FUM1	P08417	488 aa	Known RBP	3.55	□□□□□ -1.84
YEA4	YEL004W	CDC24	P11433	854 aa	Predicted RBP	3.55	□□□□□ -1.84
YEA4	YEL004W	IMG1	P25626	169 aa		3.55	□□□□□ -1.84
YEA4	YEL004W	PMU1	P36069	295 aa		3.55	□□□□□ -1.84
YEA4	YEL004W	AUR1	P36107	401 aa	Predicted RBP	3.55	□□□□□ -1.84
YEA4	YEL004W	NUP133	P36161	1157 aa		3.55	□□□□□ -1.84
YEA4	YEL004W	RPL32	P38061	130 aa	Known RBP	3.55	□□□□□ -1.84
YEA4	YEL004W	BUD32	P53323	261 aa		3.55	□□□□□ -1.84
YEA4	YEL004W	BSC5	P53755	489 aa		3.55	□□□□□ -1.84
YEA4	YEL004W	VIP1	Q06685	1146 aa	Known RBP	3.55	□□□□□ -1.84
YEA4	YEL004W	SKM1	Q12469	655 aa		3.55	□□□□□ -1.84
YEA4	YEL004W	ATR1	P13090	542 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	SGF29	P25554	259 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	YCR022C	P25620	114 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	TUL1	P36096	758 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	SHO1	P40073	367 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	DSD1	P53095	428 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	YGR126W	P53274	230 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	RBG2	P53295	368 aa	Known RBP	3.54	□□□□□ -1.84
YEA4	YEL004W	MSC1	Q03104	513 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	BNA5	Q05979	453 aa		3.54	□□□□□ -1.84
YEA4	YEL004W	ARD1	P07347	238 aa	Predicted RBP	3.53	□□□□□ -1.84
YEA4	YEL004W	SUI2	P20459	304 aa	Known RBP	3.53	□□□□□ -1.84
YEA4	YEL004W	YBR144C	P34215	104 aa		3.53	□□□□□ -1.84
YEA4	YEL004W	RRT2	P38332	387 aa		3.53	□□□□□ -1.84
YEA4	YEL004W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
YEA4	YEL004W	YJR154W	P47181	346 aa		3.53	□□□□□ -1.84
YEA4	YEL004W	MRPL51	Q06090	140 aa	Predicted RBP	3.53	□□□□□ -1.84
YEA4	YEL004W	YDL057W	Q07379	328 aa		3.53	□□□□□ -1.84
YEA4	YEL004W	YPL272C	Q08984	517 aa		3.53	□□□□□ -1.84
YEA4	YEL004W	NCE102	Q12207	173 aa	RIP-Chip data	3.53	□□□□□ -1.84	not detected
YEA4	YEL004W	MF(ALPHA)1	P01149	165 aa		3.52	□□□□□ -1.85
YEA4	YEL004W	PMR1	P13586	950 aa		3.52	□□□□□ -1.85
YEA4	YEL004W	RER1	P25560	188 aa		3.52	□□□□□ -1.85
YEA4	YEL004W	SSE2	P32590	693 aa	Known RBP	3.52	□□□□□ -1.85
YEA4	YEL004W	VPS24	P36095	224 aa	Known RBP	3.52	□□□□□ -1.85
YEA4	YEL004W	APT1	P49435	187 aa	Known RBP	3.52	□□□□□ -1.85
YEA4	YEL004W	YML131W	Q03102	365 aa		3.52	□□□□□ -1.85
YEA4	YEL004W	SLD5	Q03406	294 aa		3.52	□□□□□ -1.85
YEA4	YEL004W	BUD22	Q04347	519 aa	Known RBP	3.52	□□□□□ -1.85
YEA4	YEL004W	LUC7	Q07508	261 aa	Predicted RBP	3.52	□□□□□ -1.85
YEA4	YEL004W	YCL021W-A	Q96VH3	125 aa		3.52	□□□□□ -1.85
YEA4	YEL004W	PWP2	P25635	923 aa	Known RBP	3.51	□□□□□ -1.85
YEA4	YEL004W	FRE1	P32791	686 aa		3.51	□□□□□ -1.85
YEA4	YEL004W	YHR210C	P38893	341 aa		3.51	□□□□□ -1.85
YEA4	YEL004W	CIN4	P39110	191 aa		3.51	□□□□□ -1.85
YEA4	YEL004W	PRE5	P40302	234 aa	Known RBP	3.51	□□□□□ -1.85
YEA4	YEL004W	ALG8	P40351	577 aa		3.51	□□□□□ -1.85
YEA4	YEL004W	YSA1	Q01976	231 aa		3.51	□□□□□ -1.85
YEA4	YEL004W	VPS74	Q06385	345 aa		3.51	□□□□□ -1.85
YEA4	YEL004W	HNT3	Q08702	217 aa		3.51	□□□□□ -1.85
YEA4	YEL004W	YCR007C	P25354	239 aa		3.5	□□□□□ -1.85
YEA4	YEL004W	YIH1	P25637	258 aa		3.5	□□□□□ -1.85
YEA4	YEL004W	DPH1	P40487	425 aa	Known RBP	3.5	□□□□□ -1.85
YEA4	YEL004W	MSO1	P53604	210 aa	Known RBP	3.5	□□□□□ -1.85
YEA4	YEL004W	WSC2	P53832	503 aa		3.5	□□□□□ -1.85
YEA4	YEL004W	IRC15	Q02733	499 aa		3.5	□□□□□ -1.85
YEA4	YEL004W	IVY1	Q04934	453 aa		3.5	□□□□□ -1.85
YEA4	YEL004W	YOR365C	Q08844	703 aa		3.5	□□□□□ -1.85
YEA4	YEL004W	RAD52	P06778	471 aa	Known RBP	3.49	□□□□□ -1.85
YEA4	YEL004W	UTR4	P32626	227 aa		3.49	□□□□□ -1.85
YEA4	YEL004W	UBP11	P36026	717 aa		3.49	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms