RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	EST1	P17214	699 aa	Predicted RBP	4.64	□□□□□ -1.67
RPB7	YDR404C	UBP11	P36026	717 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	ERG7	P38604	731 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	IRC8	P47046	822 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	DIA3	P52290	468 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	PRP42	Q03776	544 aa	Known RBP	4.64	□□□□□ -1.67
RPB7	YDR404C	RPC11	Q04307	110 aa	Predicted RBP	4.64	□□□□□ -1.67
RPB7	YDR404C	VPS38	Q05919	439 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	LUC7	Q07508	261 aa	Predicted RBP	4.64	□□□□□ -1.67
RPB7	YDR404C	GRC3	Q07845	632 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	YOL159C	Q08300	171 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	YOR389W	Q08912	624 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	RIM20	Q12033	661 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	INP53	Q12271	1107 aa		4.64	□□□□□ -1.67
RPB7	YDR404C	UBR2	Q07963	1872 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	MF(ALPHA)1	P01149	165 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	MAK32	P23060	363 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	ADH7	P25377	361 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	GPI10	P30777	616 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	SNU114	P36048	1008 aa	Known RBP	4.63	□□□□□ -1.67
RPB7	YDR404C	UIP5	P36137	443 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	VID24	P38263	362 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	SMF1	P38925	575 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	UIP3	P39547	235 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	PKP1	P40530	394 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	MRK1	P50873	501 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	YNL058C	P53947	316 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	EFM6	P53970	246 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	YDR131C	Q03899	556 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	THI3	Q07471	609 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	YNL162W-A	Q3E7A8	72 aa		4.63	□□□□□ -1.67
RPB7	YDR404C	GAL80	P04387	435 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	CHO1	P08456	276 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	KGD1	P20967	1014 aa	Known RBP	4.62	□□□□□ -1.67
RPB7	YDR404C	GSY2	P27472	705 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	PXA2	P34230	853 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	BLI1	P35727	113 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	MUM2	P38236	366 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	IMD2	P38697	523 aa	Known RBP	4.62	□□□□□ -1.67
RPB7	YDR404C	KEL1	P38853	1164 aa	Known RBP	4.62	□□□□□ -1.67
RPB7	YDR404C	ERV46	P39727	415 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	PAC2	P39937	518 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	CDC1	P40986	491 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	IMD3	P50095	523 aa	Known RBP	4.62	□□□□□ -1.67
RPB7	YDR404C	VID30	P53076	958 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	COQ11	Q05892	277 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	FMP40	Q08968	688 aa	Predicted RBP	4.62	□□□□□ -1.67
RPB7	YDR404C	AVL9	Q12500	764 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	SMC6	Q12749	1114 aa		4.62	□□□□□ -1.67
RPB7	YDR404C	TEL1	P38110	2787 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	MRP2	P10663	115 aa	Predicted RBP	4.61	□□□□□ -1.67
RPB7	YDR404C	DBF4	P32325	704 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	SSE2	P32590	693 aa	Known RBP	4.61	□□□□□ -1.67
RPB7	YDR404C	TIF3	P34167	436 aa	Known RBP	4.61	□□□□□ -1.67
RPB7	YDR404C	SAS3	P34218	831 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	PEX5	P35056	612 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	TCD2	P36101	447 aa	Known RBP	4.61	□□□□□ -1.67
RPB7	YDR404C	FLO10	P36170	1169 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	FTH1	P38310	465 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	SRP72	P38688	640 aa	Known RBP	4.61	□□□□□ -1.67
RPB7	YDR404C	ELO1	P39540	310 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	YML6	P51998	286 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	YDR239C	Q03780	787 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	MRD1	Q06106	887 aa	Known RBP	4.61	□□□□□ -1.67
RPB7	YDR404C	YLR352W	Q06479	807 aa		4.61	□□□□□ -1.67
RPB7	YDR404C	BI2	P03873	423 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	MRP13	P12686	339 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	SYN8	P31377	255 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	MGM1	P32266	881 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	YBR144C	P34215	104 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	SEF1	P34228	1148 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	CST26	P38226	397 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	LTP1	P40347	161 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	PET130	P47065	347 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	IMD4	P50094	524 aa	Known RBP	4.6	□□□□□ -1.67
RPB7	YDR404C	FMP30	Q02883	468 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	IRC4	Q03036	179 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	UBX2	Q04228	584 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	DPB4	Q04603	196 aa	Known RBP	4.6	□□□□□ -1.67
RPB7	YDR404C	ECM22	Q05958	814 aa	Predicted RBP	4.6	□□□□□ -1.67
RPB7	YDR404C	RTT109	Q07794	436 aa		4.6	□□□□□ -1.67
RPB7	YDR404C	LEU9	Q12166	604 aa	Known RBP	4.6	□□□□□ -1.67
RPB7	YDR404C	RDL1	Q12305	139 aa	Known RBP	4.6	□□□□□ -1.67
RPB7	YDR404C	YER145C-A	A0A023PYF4	145 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	PDA1	P16387	420 aa	Known RBP	4.59	□□□□□ -1.67
RPB7	YDR404C	PUP3	P25451	205 aa	Known RBP	4.59	□□□□□ -1.67
RPB7	YDR404C	ADK2	P26364	225 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	DUR1,2	P32528	1835 aa	Known RBP	4.59	□□□□□ -1.67
RPB7	YDR404C	MRE11	P32829	692 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	WBP1	P33767	430 aa	Known RBP	4.59	□□□□□ -1.67
RPB7	YDR404C	ALG5	P40350	334 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	CIN1	P40987	1014 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	FAR3	P46671	204 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	SMC3	P47037	1230 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	HOS2	P53096	452 aa	Predicted RBP	4.59	□□□□□ -1.67
RPB7	YDR404C	NNF2	P53253	936 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	IPI3	P53877	555 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	BOP3	P53958	396 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	PFA5	Q03289	374 aa		4.59	□□□□□ -1.67
RPB7	YDR404C	YLR455W	Q06188	304 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms