RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A NPL6P32832 435 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A SEF1P34228 1148 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A ERG7P38604 731 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A ALG5P40350 334 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A SPO22P40511 975 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A FET5P43561 622 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A LSC1P53598 329 aaKnown RBP3.34□□□□□ -1.87
YDR170W-AYDR170W-A DUG3P53871 357 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A RPT6Q01939 405 aaKnown RBP3.34□□□□□ -1.87
YDR170W-AYDR170W-A MSC1Q03104 513 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A RSF1Q05043 376 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A YLR287CQ05881 355 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A FOB1O13329 566 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A DFR1P07807 211 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
YDR170W-AYDR170W-A HNM1P19807 563 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A SRO77P38163 1010 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A EFM2P38347 419 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A LAG1P38703 411 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A MET28P40573 187 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A IMD4P50094 524 aaKnown RBP3.33□□□□□ -1.88
YDR170W-AYDR170W-A SMM1P53720 384 aaKnown RBP3.33□□□□□ -1.88
YDR170W-AYDR170W-A GIR2Q03768 265 aaPredicted RBP3.33□□□□□ -1.88
YDR170W-AYDR170W-A NUP53Q03790 475 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A YMR160WQ03823 816 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A YDR415CQ04033 374 aaPredicted RBP3.33□□□□□ -1.88
YDR170W-AYDR170W-A RPC11Q04307 110 aaPredicted RBP3.33□□□□□ -1.88
YDR170W-AYDR170W-A FMP42Q04991 504 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A YLR281CQ05863 155 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A VPS38Q05919 439 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A SSK1Q07084 712 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A BSC1Q12140 328 aa3.33□□□□□ -1.88
YDR170W-AYDR170W-A HSH49Q99181 213 aaPredicted RBP3.33□□□□□ -1.88
YDR170W-AYDR170W-A RED1P14291 827 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A PDA1P16387 420 aaKnown RBP3.32□□□□□ -1.88
YDR170W-AYDR170W-A SNC1P31109 117 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A RAD24P32641 659 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A PHD1P36093 366 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A TCD2P36101 447 aaKnown RBP3.32□□□□□ -1.88
YDR170W-AYDR170W-A CIN4P39110 191 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A ROK1P45818 564 aaPredicted RBP3.32□□□□□ -1.88
YDR170W-AYDR170W-A SNG1P46950 547 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A YGR126WP53274 230 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A YVH1Q02256 364 aaKnown RBP3.32□□□□□ -1.88
YDR170W-AYDR170W-A YPL014WQ02606 381 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A YLR352WQ06479 807 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A CDC45Q08032 650 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A SFI1Q12369 946 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A AVL9Q12500 764 aa3.32□□□□□ -1.88
YDR170W-AYDR170W-A GAL80P04387 435 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A ROX1P25042 368 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A RPS2P25443 254 aaKnown RBP3.31□□□□□ -1.88
YDR170W-AYDR170W-A RKM3P38222 552 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A YEL057CP39983 233 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A YND1P40009 630 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A DOT5P40553 215 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A AXL1P40851 1208 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A AZF1P41696 914 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A VTC2P43585 828 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A SAD1P43589 448 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A ATG27P46989 271 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A SYF1Q04048 859 aaPredicted RBP3.31□□□□□ -1.88
YDR170W-AYDR170W-A DIC1Q06143 298 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A YDL057WQ07379 328 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A RLM1Q12224 676 aa3.31□□□□□ -1.88
YDR170W-AYDR170W-A PGA3Q12746 312 aaKnown RBP3.31□□□□□ -1.88
YDR170W-AYDR170W-A MET17P06106 444 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A BAR1P12630 587 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A SUI2P20459 304 aaKnown RBP3.3□□□□□ -1.88
YDR170W-AYDR170W-A ERG3P32353 365 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A RPN2P32565 945 aaKnown RBP3.3□□□□□ -1.88
YDR170W-AYDR170W-A NFU1P32860 256 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A TRS65P32893 560 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A YKL023WP36103 277 aaKnown RBP3.3□□□□□ -1.88
YDR170W-AYDR170W-A MIC60P36112 540 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A SPC34P36131 295 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A DED81P38707 554 aaKnown RBP3.3□□□□□ -1.88
YDR170W-AYDR170W-A MET18P40469 1032 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A BUD32P53323 261 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A JJJ1P53863 590 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A SHR3Q02774 210 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A MSS11Q03825 758 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A COQ9Q05779 260 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A NCE102Q12207 173 aaRIP-Chip data3.3□□□□□ -1.88not detected
YDR170W-AYDR170W-A CSR2Q12734 1121 aa3.3□□□□□ -1.88
YDR170W-AYDR170W-A PEP5P12868 1029 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A GLN3P18494 730 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A FUR1P18562 216 aaKnown RBP3.29□□□□□ -1.88
YDR170W-AYDR170W-A SGV1P23293 657 aaKnown RBP3.29□□□□□ -1.88
YDR170W-AYDR170W-A ACH1P32316 526 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A WBP1P33767 430 aaKnown RBP3.29□□□□□ -1.88
YDR170W-AYDR170W-A VID24P38263 362 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A MSR1P38714 643 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A BZZ1P38822 633 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A YER130CP39959 443 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A YIR014WP40570 242 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A TDA7P53882 636 aaPredicted RBP3.29□□□□□ -1.88
YDR170W-AYDR170W-A FIN1Q03898 291 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A FMP45Q07651 309 aa3.29□□□□□ -1.88
YDR170W-AYDR170W-A PDH1Q12428 516 aaKnown RBP3.29□□□□□ -1.88
YDR170W-AYDR170W-A GRX6Q12438 231 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms