RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL228C	YDL228C	THI80	P35202	319 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	BYE1	P36106	594 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	LAS1	P36146	502 aa	Predicted RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	DED81	P38707	554 aa	Known RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	YEL073C	P39974	107 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	IME4	P41833	600 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	GAT1	P43574	510 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	MAL13	P53338	473 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	COG6	P53959	839 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	TGL2	P54857	326 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	SDH1	Q00711	640 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	AAT1	Q01802	451 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	OSH6	Q02201	448 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	ROT1	Q03691	256 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	RRB1	Q04225	511 aa	Known RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	CDC123	Q05791	360 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	YLR456W	Q06199	204 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	GIC2	Q06648	383 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	ADY3	Q07732	790 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	RPN8	Q08723	338 aa	Known RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	TGL5	Q12043	749 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	MRH1	Q12117	320 aa	Predicted RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	MCD1	Q12158	566 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	YIL046W-A	Q3E7Z4	54 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	GCN1	P33892	2672 aa	Known RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	BRR2	P32639	2163 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	RPS4A	P0CX35	261 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	RPS4B	P0CX36	261 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	UBC6	P33296	250 aa	Predicted RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	PEX5	P35056	612 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	STB6	P36085	766 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	PIM1	P36775	1133 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	YSW1	P38280	609 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	LEU5	P38702	357 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	YHR020W	P38708	688 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	UBA4	P38820	440 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	YAR028W	P39548	234 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	LSM5	P40089	93 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	INA22	P40576	216 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	SSU1	P41930	458 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	YFL054C	P43549	646 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	BIR1	P47134	954 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	BUD32	P53323	261 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	RNY1	Q02933	434 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	TRM12	Q04235	462 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	BUD22	Q04347	519 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	YMR027W	Q04371	470 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	RCO1	Q04779	684 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	BNA5	Q05979	453 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	ATG23	Q06671	453 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	NOP6	Q07623	225 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	NUS1	Q12063	375 aa		4.03	□□□□□ -1.76
YDL228C	YDL228C	RIO1	Q12196	484 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	HRP1	Q99383	534 aa	Known RBP	4.03	□□□□□ -1.76
YDL228C	YDL228C	PET111	P08468	800 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	ILS1	P09436	1072 aa	Known RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	SEC14	P24280	304 aa	Known RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	CWP1	P28319	239 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	HRR25	P29295	494 aa	Known RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	ATP11	P32453	318 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	BEM3	P32873	1128 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	PDR3	P33200	976 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	RRP1	P35178	278 aa	Predicted RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	TOM20	P35180	183 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	MRPL37	P36532	105 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	MAK5	P38112	773 aa	Predicted RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	SHU2	P38957	223 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	UME6	P39001	836 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
YDL228C	YDL228C	MNN1	P39106	762 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	YAL037W	P39728	267 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	CFD1	P40558	293 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	FET5	P43561	622 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	MIC19	P43594	170 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	YFR018C	P43599	363 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	YFR020W	P43600	232 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	TIS11	P47977	285 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
YDL228C	YDL228C	SPP2	Q02521	185 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	CTK1	Q03957	528 aa	Known RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	YDR109C	Q04585	715 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	SSL1	Q04673	461 aa	Predicted RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	STP3	Q05937	343 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	RSA3	Q05942	220 aa	Known RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	BLS1	Q06071	122 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	RSC3	Q06639	885 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	YET3	Q07451	203 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	AVO1	Q08236	1176 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	NUR1	Q12066	484 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	PST1	Q12355	444 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	ICT1	Q12385	394 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	YMR030W-A	Q3E760	96 aa		4.02	□□□□□ -1.77
YDL228C	YDL228C	NOP14	Q99207	810 aa	Known RBP	4.02	□□□□□ -1.77
YDL228C	YDL228C	SEC53	P07283	254 aa	Known RBP	4.01	□□□□□ -1.77
YDL228C	YDL228C	GPA2	P10823	449 aa		4.01	□□□□□ -1.77
YDL228C	YDL228C	ABF1	P14164	731 aa		4.01	□□□□□ -1.77
YDL228C	YDL228C	NFS1	P25374	497 aa		4.01	□□□□□ -1.77
YDL228C	YDL228C	KAR4	P25583	335 aa		4.01	□□□□□ -1.77
YDL228C	YDL228C	AAD3	P25612	363 aa		4.01	□□□□□ -1.77
YDL228C	YDL228C	MKK2	P32491	506 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms