RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	KEL3	Q08979	651 aa	Predicted RBP	3.22	□□□□□ -1.89
HBT1	YDL223C	GPM3	Q12326	303 aa		3.22	□□□□□ -1.89
HBT1	YDL223C	HIF1	Q12373	385 aa		3.22	□□□□□ -1.89
HBT1	YDL223C	PDH1	Q12428	516 aa	Known RBP	3.22	□□□□□ -1.89
HBT1	YDL223C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
HBT1	YDL223C	HXT3	P32466	567 aa	Known RBP	3.21	□□□□□ -1.9
HBT1	YDL223C	SIP1	P32578	815 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	GMH1	P36125	273 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	AAP1	P37898	856 aa	Known RBP	3.21	□□□□□ -1.9
HBT1	YDL223C	VBA2	P38358	474 aa	Known RBP	3.21	□□□□□ -1.9
HBT1	YDL223C	GIP4	P39732	760 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	TIF4631	P39935	952 aa	Known RBP	3.21	□□□□□ -1.9
HBT1	YDL223C	STR3	P53101	465 aa	Known RBP	3.21	□□□□□ -1.9
HBT1	YDL223C	MSC1	Q03104	513 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	YDR239C	Q03780	787 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	PLM2	Q04383	521 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	COQ9	Q05779	260 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	NFI1	Q12216	726 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	ECM29	P38737	1868 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	YER145C-A	A0A023PYF4	145 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	TPK2	P06245	380 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	YCR051W	P25631	222 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	ARP1	P38696	384 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	ECM10	P39987	644 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	YGL242C	P53066	181 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	VPS73	P53142	486 aa	Known RBP	3.21	□□□□□ -1.9
HBT1	YDL223C	MMR1	Q06324	491 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	ATG29	Q12092	213 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	BAG7	Q12128	409 aa		3.21	□□□□□ -1.9
HBT1	YDL223C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
HBT1	YDL223C	COQ6	P53318	479 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	ARG7	Q04728	441 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	AIM39	Q08223	395 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	RPS10A	Q08745	105 aa	Predicted RBP	3.2	□□□□□ -1.9
HBT1	YDL223C	NCB2	Q92317	146 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	AFI1	Q99222	893 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	EMP70	P32802	667 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	MRE11	P32829	692 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	MDE1	P47095	244 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	ASN1	P49089	572 aa	Known RBP	3.2	□□□□□ -1.9
HBT1	YDL223C	HOT1	Q03213	719 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	WAR1	Q03631	944 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	ZPS1	Q12512	249 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	VPS13	Q07878	3144 aa		3.2	□□□□□ -1.9
HBT1	YDL223C	MDL1	P33310	695 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	RPF2	P36160	344 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	PXL1	P36166	706 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	ERV46	P39727	415 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	THI6	P41835	540 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	SSU1	P41930	458 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	RPS10B	P46784	105 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	BTN2	P53286	410 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	EFM6	P53970	246 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	YVH1	Q02256	364 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	SOV1	Q04748	898 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	ECM30	Q06673	1274 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	FRE6	Q12473	712 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	APN1	P22936	367 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	LOT5	P34234	306 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	KES1	P35844	434 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	SEC31	P38968	1273 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	ELO1	P39540	310 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	AFG3	P39925	761 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	CDC1	P40986	491 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	APT1	P49435	187 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	YGR066C	P53242	292 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	BUD22	Q04347	519 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	CYK3	Q07533	885 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	TGS1	Q12052	315 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	SUT2	Q12286	268 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	RPL3	P14126	387 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	PDA1	P16387	420 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	PUP3	P25451	205 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	SSE2	P32590	693 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	RFC1	P38630	861 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	SER3	P40054	469 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	OPT1	P40897	799 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	UBX6	P47049	396 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	MLC1	P53141	149 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	SUN4	P53616	420 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	RQC1	Q05468	723 aa	Known RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	SMF3	Q12078	473 aa	Predicted RBP	3.19	□□□□□ -1.9
HBT1	YDL223C	AVL9	Q12500	764 aa		3.19	□□□□□ -1.9
HBT1	YDL223C	WHI2	P12611	486 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	CLB3	P24870	427 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	UGP1	P32861	499 aa	Known RBP	3.18	□□□□□ -1.9
HBT1	YDL223C	CMC1	P36064	111 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	ARG2	P40360	574 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	SEC28	P40509	296 aa	Known RBP	3.18	□□□□□ -1.9
HBT1	YDL223C	TDA10	P42938	290 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	YPL107W	Q02873	248 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	TAF3	Q12297	353 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	VMA2	P16140	517 aa	Known RBP	3.18	□□□□□ -1.9
HBT1	YDL223C	PPH22	P23595	377 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	SEC66	P33754	206 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	SNU114	P36048	1008 aa	Known RBP	3.18	□□□□□ -1.9
HBT1	YDL223C	UIP5	P36137	443 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	IMD2	P38697	523 aa	Known RBP	3.18	□□□□□ -1.9
HBT1	YDL223C	ANS1	P38832	159 aa		3.18	□□□□□ -1.9
HBT1	YDL223C	YMR147W	P40218	223 aa	Known RBP	3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 85.9 ms