RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	VPS38	Q05919	439 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	ECM30	Q06673	1274 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	RPS10A	Q08745	105 aa	Predicted RBP	5.88	□□□□□ -1.47
SIR2	YDL042C	YLR112W	Q12130	139 aa		5.88	□□□□□ -1.47
SIR2	YDL042C	TY3B-G	Q99315	1547 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	YPR089W	O13585	888 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	BOS1	P25385	244 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	GAC1	P28006	793 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	YBL055C	P34220	418 aa	Predicted RBP	5.87	□□□□□ -1.47
SIR2	YDL042C	ARP1	P38696	384 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	YMR124W	P39523	943 aa	Known RBP	5.87	□□□□□ -1.47
SIR2	YDL042C	ALG5	P40350	334 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	YIL060W	P40519	144 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	YML122C	Q03207	126 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	TAF11	Q04226	346 aa		5.87	□□□□□ -1.47
SIR2	YDL042C	ADE13	Q05911	482 aa	Known RBP	5.87	□□□□□ -1.47
SIR2	YDL042C	DNF2	Q12675	1612 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.86	□□□□□ -1.47	not detected
SIR2	YDL042C	CKA1	P15790	372 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	TIF3	P34167	436 aa	Known RBP	5.86	□□□□□ -1.47
SIR2	YDL042C	YKL100C	P34248	587 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	NUP133	P36161	1157 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	DOT5	P40553	215 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	APT1	P49435	187 aa	Known RBP	5.86	□□□□□ -1.47
SIR2	YDL042C	IPI3	P53877	555 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	RSM23	Q01163	450 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	UTP21	Q06078	939 aa	Predicted RBP	5.86	□□□□□ -1.47
SIR2	YDL042C	HER1	Q12276	1246 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	TRM3	Q07527	1436 aa		5.86	□□□□□ -1.47
SIR2	YDL042C	MET17	P06106	444 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	PUT2	P07275	575 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	AIM17	P23180	465 aa	Known RBP	5.85	□□□□□ -1.47
SIR2	YDL042C	UTP9	P38882	575 aa	Known RBP	5.85	□□□□□ -1.47
SIR2	YDL042C	YEL057C	P39983	233 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	HOS2	P53096	452 aa	Predicted RBP	5.85	□□□□□ -1.47
SIR2	YDL042C	MRPL1	Q04599	285 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	GSH2	Q08220	491 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	AVL9	Q12500	764 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	GEA1	P47102	1408 aa	Predicted RBP	5.85	□□□□□ -1.47
SIR2	YDL042C	GAL80	P04387	435 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	CBP1	P07252	654 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	MRP13	P12686	339 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	TCD2	P36101	447 aa	Known RBP	5.85	□□□□□ -1.47
SIR2	YDL042C	LEU5	P38702	357 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	MET28	P40573	187 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	IMD4	P50094	524 aa	Known RBP	5.85	□□□□□ -1.47
SIR2	YDL042C	CTL1	Q03220	320 aa	Known RBP	5.85	□□□□□ -1.47
SIR2	YDL042C	YLR287C	Q05881	355 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	YDL218W	Q07629	317 aa		5.85	□□□□□ -1.47
SIR2	YDL042C	HSH49	Q99181	213 aa	Predicted RBP	5.85	□□□□□ -1.47
SIR2	YDL042C	DOP1	Q03921	1698 aa		5.84	□□□□□ -1.47
SIR2	YDL042C	FOB1	O13329	566 aa		5.84	□□□□□ -1.47
SIR2	YDL042C	PDA1	P16387	420 aa	Known RBP	5.84	□□□□□ -1.47
SIR2	YDL042C	BUD5	P25300	642 aa	Predicted RBP	5.84	□□□□□ -1.47
SIR2	YDL042C	UBA4	P38820	440 aa		5.84	□□□□□ -1.47
SIR2	YDL042C	YNL234W	P53857	426 aa		5.84	□□□□□ -1.47
SIR2	YDL042C	RPC11	Q04307	110 aa	Predicted RBP	5.84	□□□□□ -1.47
SIR2	YDL042C	EDE1	P34216	1381 aa		5.84	□□□□□ -1.47
SIR2	YDL042C	CAT8	P39113	1433 aa		5.84	□□□□□ -1.48
SIR2	YDL042C	BUD3	P25558	1636 aa		5.84	□□□□□ -1.48
SIR2	YDL042C	SNF3	P10870	884 aa		5.83	□□□□□ -1.48
SIR2	YDL042C	ART10	P18634	518 aa	Known RBP	5.83	□□□□□ -1.48
SIR2	YDL042C	RPL32	P38061	130 aa	Known RBP	5.83	□□□□□ -1.48
SIR2	YDL042C	GAT1	P43574	510 aa		5.83	□□□□□ -1.48
SIR2	YDL042C	IZH1	Q03419	316 aa		5.83	□□□□□ -1.48
SIR2	YDL042C	RLM1	Q12224	676 aa		5.83	□□□□□ -1.48
SIR2	YDL042C	ARO1	P08566	1588 aa	Known RBP	5.82	□□□□□ -1.48
SIR2	YDL042C	YCP4	P25349	247 aa	Known RBP	5.82	□□□□□ -1.48
SIR2	YDL042C	MGM1	P32266	881 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	MFT1	P33441	392 aa	Known RBP	5.82	□□□□□ -1.48
SIR2	YDL042C	MPE1	P35728	441 aa	Known RBP	5.82	□□□□□ -1.48
SIR2	YDL042C	PYK2	P52489	506 aa	Known RBP	5.82	□□□□□ -1.48
SIR2	YDL042C	PKP2	P53170	491 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	ECI1	Q05871	280 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	YBT1	P32386	1661 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	RED1	P14291	827 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	ROX1	P25042	368 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	YPT53	P36019	220 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	PCI8	P40512	444 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	ROK1	P45818	564 aa	Predicted RBP	5.82	□□□□□ -1.48
SIR2	YDL042C	BOP3	P53958	396 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	MSC1	Q03104	513 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	SYF1	Q04048	859 aa	Predicted RBP	5.82	□□□□□ -1.48
SIR2	YDL042C	CDC45	Q08032	650 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	RDR1	Q08904	546 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	SCM3	Q12334	223 aa		5.82	□□□□□ -1.48
SIR2	YDL042C	RPL42A	P0CX27	106 aa	Known RBP	5.81	□□□□□ -1.48
SIR2	YDL042C	RPL42B	P0CX28	106 aa	Known RBP	5.81	□□□□□ -1.48
SIR2	YDL042C	WBP1	P33767	430 aa	Known RBP	5.81	□□□□□ -1.48
SIR2	YDL042C	ROT2	P38138	954 aa		5.81	□□□□□ -1.48
SIR2	YDL042C	SPC97	P38863	823 aa		5.81	□□□□□ -1.48
SIR2	YDL042C	CIN4	P39110	191 aa		5.81	□□□□□ -1.48
SIR2	YDL042C	YIR016W	P40572	265 aa		5.81	□□□□□ -1.48
SIR2	YDL042C	MDV1	P47025	714 aa		5.81	□□□□□ -1.48
SIR2	YDL042C	FIN1	Q03898	291 aa		5.81	□□□□□ -1.48
SIR2	YDL042C	SPC19	Q03954	165 aa		5.81	□□□□□ -1.48
SIR2	YDL042C	YPT1	P01123	206 aa	Known RBP	5.8	□□□□□ -1.48
SIR2	YDL042C	MTR2	P34232	184 aa	Known RBP	5.8	□□□□□ -1.48
SIR2	YDL042C	GND1	P38720	489 aa	Known RBP	5.8	□□□□□ -1.48
SIR2	YDL042C	PHO90	P39535	881 aa		5.8	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 188.5 ms