RNA–Protein interactions for RNA: YBR253W

SRB6, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB6, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB6	YBR253W	SSE2	P32590	693 aa	Known RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	UGP1	P32861	499 aa	Known RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	HCS1	P34243	683 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	WSS1	P38838	269 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	SEC31	P38968	1273 aa	Known RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	STU2	P46675	888 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	SMC3	P47037	1230 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	UBC11	P52492	156 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	MGR3	Q04472	501 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	YSH1	Q06224	779 aa	Predicted RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	IRC13	Q08630	104 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	VPS54	Q12071	889 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	MLH3	Q12083	715 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	RTC5	Q12108	567 aa	Known RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	BAG7	Q12128	409 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	LEU9	Q12166	604 aa	Known RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	HER1	Q12276	1246 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	ROM2	P51862	1356 aa	Known RBP	4.8	□□□□□ -1.64
SRB6	YBR253W	YMR084W	A2P2R3	262 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	HIP1	P06775	603 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	RRP43	P25359	394 aa	Predicted RBP	4.8	□□□□□ -1.64
SRB6	YBR253W	DAL80	P26343	269 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	NIP1	P32497	812 aa	Known RBP	4.8	□□□□□ -1.64
SRB6	YBR253W	SSE1	P32589	693 aa	Known RBP	4.8	□□□□□ -1.64
SRB6	YBR253W	TUL1	P36096	758 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	CCL1	P37366	393 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	SER3	P40054	469 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	ELO3	P40319	345 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	HYR1	P40581	163 aa	Known RBP	4.8	□□□□□ -1.64
SRB6	YBR253W	CHS6	P40955	746 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	UBX6	P47049	396 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	MSY1	P48527	492 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	FMS1	P50264	508 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	YIP4	P53093	235 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	CUE3	P53137	624 aa	Known RBP	4.8	□□□□□ -1.64
SRB6	YBR253W	BUD17	P53727	317 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	ALF1	P53904	254 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	YNL092W	P53934	400 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	EFM6	P53970	246 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	ADE16	P54113	591 aa	Known RBP	4.8	□□□□□ -1.64
SRB6	YBR253W	YMR187C	Q03236	431 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	FIN1	Q03898	291 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	YDR132C	Q03900	495 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	FRE3	Q08905	711 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	TAF3	Q12297	353 aa		4.8	□□□□□ -1.64
SRB6	YBR253W	MET3	P08536	511 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	YPK1	P12688	680 aa	Known RBP	4.79	□□□□□ -1.64
SRB6	YBR253W	SRP54	P20424	541 aa	Known RBP	4.79	□□□□□ -1.64
SRB6	YBR253W	ADH7	P25377	361 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	IDH2	P28241	369 aa	Known RBP	4.79	□□□□□ -1.64
SRB6	YBR253W	NIP100	P33420	868 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	HIS7	P33734	552 aa	Known RBP	4.79	□□□□□ -1.64
SRB6	YBR253W	HES1	P35843	434 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	AAP1	P37898	856 aa	Known RBP	4.79	□□□□□ -1.64
SRB6	YBR253W	DIA4	P38705	446 aa	Predicted RBP	4.79	□□□□□ -1.64
SRB6	YBR253W	APT1	P49435	187 aa	Known RBP	4.79	□□□□□ -1.64
SRB6	YBR253W	MLC1	P53141	149 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	DIP5	P53388	608 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	NSG2	P53898	299 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	UBP16	Q02863	499 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	YPL034W	Q03083	165 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	DLT1	Q04216	342 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	RAD33	Q04231	177 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	YDR109C	Q04585	715 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	ARG7	Q04728	441 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	YDL086W	Q07505	273 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	YDL242W	Q07746	117 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	SIL1	Q08199	421 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	YPL216W	Q08964	1102 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	USV1	Q12132	391 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	YKL033W-A	Q86ZR7	236 aa		4.79	□□□□□ -1.64
SRB6	YBR253W	HXK2	P04807	486 aa	Known RBP	4.78	□□□□□ -1.64
SRB6	YBR253W	RPL6B	P05739	176 aa	Known RBP	4.78	□□□□□ -1.64
SRB6	YBR253W	SIR3	P06701	978 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	OM45	P16547	393 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	KGD2	P19262	463 aa	Predicted RBP	4.78	□□□□□ -1.64
SRB6	YBR253W	GRR1	P24814	1151 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	YME1	P32795	747 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	YBR144C	P34215	104 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	STB2	P46679	850 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	AIP1	P46680	615 aa	Known RBP	4.78	□□□□□ -1.64
SRB6	YBR253W	NET1	P47035	1189 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	YGR149W	P48236	432 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	DCP2	P53550	970 aa	Known RBP	4.78	□□□□□ -1.64
SRB6	YBR253W	RPL6A	Q02326	176 aa	Known RBP	4.78	□□□□□ -1.64
SRB6	YBR253W	ACL4	Q03771	387 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	PPM1	Q04081	328 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	YML053C	Q04978	212 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	YLH47	Q06493	454 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	ATG9	Q12142	997 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	RKI1	Q12189	258 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	UBX3	Q12229	455 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	YDL007C-A	Q2V2Q0	85 aa		4.78	□□□□□ -1.64
SRB6	YBR253W	TRP3	P00937	484 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	ARO3	P14843	370 aa	Known RBP	4.77	□□□□□ -1.65
SRB6	YBR253W	URA4	P20051	364 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	DBP3	P20447	523 aa	Known RBP	4.77	□□□□□ -1.65
SRB6	YBR253W	MBR1	P23493	339 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	PUP3	P25451	205 aa	Known RBP	4.77	□□□□□ -1.65
SRB6	YBR253W	IMG1	P25626	169 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms