RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C SRL4Q03085 281 aa6.79□□□□□ -1.32
TDP1YBR223C MRI1Q06489 411 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C GPI11Q06636 219 aa6.79□□□□□ -1.32
TDP1YBR223C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
TDP1YBR223C PFK27Q12471 397 aaPredicted RBP6.79□□□□□ -1.32
TDP1YBR223C HTA2P04912 132 aa6.78□□□□□ -1.32
TDP1YBR223C RAP1P11938 827 aa6.78□□□□□ -1.32
TDP1YBR223C CTR86P25355 563 aa6.78□□□□□ -1.32
TDP1YBR223C SGE1P33335 543 aa6.78□□□□□ -1.32
TDP1YBR223C UTP11P34247 250 aaPredicted RBP6.78□□□□□ -1.32
TDP1YBR223C FTH1P38310 465 aa6.78□□□□□ -1.32
TDP1YBR223C SWD1P39706 426 aa6.78□□□□□ -1.32
TDP1YBR223C RGI1P40043 161 aaPredicted RBP6.78□□□□□ -1.32
TDP1YBR223C IES5P40060 125 aa6.78□□□□□ -1.32
TDP1YBR223C YJL070CP40361 888 aa6.78□□□□□ -1.32
TDP1YBR223C YPT32P51996 222 aaKnown RBP6.78□□□□□ -1.32
TDP1YBR223C COG1P53079 417 aa6.78□□□□□ -1.32
TDP1YBR223C YNL143CP53908 130 aa6.78□□□□□ -1.32
TDP1YBR223C YMR010WQ03687 405 aa6.78□□□□□ -1.32
TDP1YBR223C YMR111CQ04461 462 aaPredicted RBP6.78□□□□□ -1.32
TDP1YBR223C ENT2Q05785 613 aa6.78□□□□□ -1.32
TDP1YBR223C YHC1Q05900 231 aaKnown RBP6.78□□□□□ -1.32
TDP1YBR223C REH1Q06709 432 aa6.78□□□□□ -1.32
TDP1YBR223C GYP1Q08484 637 aa6.78□□□□□ -1.32
TDP1YBR223C JLP1Q12358 412 aa6.78□□□□□ -1.32
TDP1YBR223C HXK2P04807 486 aaKnown RBP6.77□□□□□ -1.33
TDP1YBR223C SFP1P32432 683 aa6.77□□□□□ -1.33
TDP1YBR223C CDC5P32562 705 aa6.77□□□□□ -1.33
TDP1YBR223C YKL100CP34248 587 aa6.77□□□□□ -1.33
TDP1YBR223C GOS1P38736 223 aa6.77□□□□□ -1.33
TDP1YBR223C AYR1P40471 297 aa6.77□□□□□ -1.33
TDP1YBR223C GTS1P40956 396 aa6.77□□□□□ -1.33
TDP1YBR223C NUP85P46673 744 aa6.77□□□□□ -1.33
TDP1YBR223C AMA1P50082 593 aa6.77□□□□□ -1.33
TDP1YBR223C ARE2P53629 642 aaKnown RBP6.77□□□□□ -1.33
TDP1YBR223C ESF2P53743 316 aaKnown RBP6.77□□□□□ -1.33
TDP1YBR223C TFB3Q03290 321 aa6.77□□□□□ -1.33
TDP1YBR223C FMP42Q04991 504 aa6.77□□□□□ -1.33
TDP1YBR223C SSQ1Q05931 657 aaPredicted RBP6.77□□□□□ -1.33
TDP1YBR223C MCM21Q06675 368 aa6.77□□□□□ -1.33
TDP1YBR223C RPN6Q12377 434 aa6.77□□□□□ -1.33
TDP1YBR223C PEX11Q12462 236 aa6.77□□□□□ -1.33
TDP1YBR223C RAS2P01120 322 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C PRT1P06103 763 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C RAD7P06779 565 aa6.76□□□□□ -1.33
TDP1YBR223C NTG1P31378 399 aa6.76□□□□□ -1.33
TDP1YBR223C RPC82P32349 654 aa6.76□□□□□ -1.33
TDP1YBR223C APE2P32454 952 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C SCD5P34758 872 aa6.76□□□□□ -1.33
TDP1YBR223C MPT5P39016 859 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
TDP1YBR223C AVT6P40074 448 aa6.76□□□□□ -1.33
TDP1YBR223C IRR1P40541 1150 aa6.76□□□□□ -1.33
TDP1YBR223C IME4P41833 600 aa6.76□□□□□ -1.33
TDP1YBR223C PTR3P43606 678 aa6.76□□□□□ -1.33
TDP1YBR223C IRC5P43610 853 aa6.76□□□□□ -1.33
TDP1YBR223C MON1P53129 644 aa6.76□□□□□ -1.33
TDP1YBR223C YGR054WP53235 642 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C YNR068CP53754 272 aa6.76□□□□□ -1.33
TDP1YBR223C SED5Q01590 340 aa6.76□□□□□ -1.33
TDP1YBR223C YMR099CQ03161 297 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C EFR3Q03653 782 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C ECM11Q04110 302 aa6.76□□□□□ -1.33
TDP1YBR223C YDR124WQ04608 324 aa6.76□□□□□ -1.33
TDP1YBR223C SSL1Q04673 461 aaPredicted RBP6.76□□□□□ -1.33
TDP1YBR223C VTA1Q06263 330 aa6.76□□□□□ -1.33
TDP1YBR223C IOC2Q12072 812 aa6.76□□□□□ -1.33
TDP1YBR223C SRF1Q12516 437 aa6.76□□□□□ -1.33
TDP1YBR223C YOL159C-AQ3E769 90 aa6.76□□□□□ -1.33
TDP1YBR223C YKL018C-AQ3E7A7 99 aa6.76□□□□□ -1.33
TDP1YBR223C SPT3P06844 337 aa6.76□□□□□ -1.33
TDP1YBR223C DST1P07273 309 aa6.76□□□□□ -1.33
TDP1YBR223C RPS4AP0CX35 261 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C RPS4BP0CX36 261 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C PDE1P22434 369 aa6.76□□□□□ -1.33
TDP1YBR223C MRPL32P25348 183 aa6.76□□□□□ -1.33
TDP1YBR223C OCA4P25366 362 aa6.76□□□□□ -1.33
TDP1YBR223C MRPL9P31334 269 aa6.76□□□□□ -1.33
TDP1YBR223C AAR2P32357 355 aaPredicted RBP6.76□□□□□ -1.33
TDP1YBR223C ARP2P32381 391 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C TPO5P36029 618 aa6.76□□□□□ -1.33
TDP1YBR223C LDH1P38139 375 aa6.76□□□□□ -1.33
TDP1YBR223C MTW1P39731 289 aa6.76□□□□□ -1.33
TDP1YBR223C YER034WP40022 185 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C MEP1P40260 492 aa6.76□□□□□ -1.33
TDP1YBR223C PAN6P40459 309 aa6.76□□□□□ -1.33
TDP1YBR223C MEP2P41948 499 aa6.76□□□□□ -1.33
TDP1YBR223C GUS1P46655 708 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
TDP1YBR223C TIS11P47977 285 aa6.76□□□□□ -1.33
TDP1YBR223C RBL2P48606 106 aaKnown RBP6.76□□□□□ -1.33
TDP1YBR223C BNI4P53858 892 aa6.76□□□□□ -1.33
TDP1YBR223C PEX13P80667 386 aa6.76□□□□□ -1.33
TDP1YBR223C YOR387CQ08910 206 aa6.76□□□□□ -1.33
TDP1YBR223C MCD1Q12158 566 aa6.76□□□□□ -1.33
TDP1YBR223C MHF2Q3E829 80 aa6.76□□□□□ -1.33
TDP1YBR223C YAP1P19880 650 aaKnown RBP6.75□□□□□ -1.33
TDP1YBR223C UBA1P22515 1024 aaKnown RBP6.75□□□□□ -1.33
TDP1YBR223C CRM1P30822 1084 aaKnown RBP6.75□□□□□ -1.33
TDP1YBR223C RIB7P33312 244 aa6.75□□□□□ -1.33
TDP1YBR223C PRP18P33411 251 aaPredicted RBP6.75□□□□□ -1.33
TDP1YBR223C THI80P35202 319 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms