RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDS1	YBR029C	PMS1	P14242	873 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	CNA1	P23287	553 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	GAC1	P28006	793 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	ROT2	P38138	954 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	RPS10B	P46784	105 aa	Known RBP	5.76	□□□□□ -1.49
CDS1	YBR029C	VPS25	P47142	202 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	ERG13	P54839	491 aa	Known RBP	5.76	□□□□□ -1.49
CDS1	YBR029C	CIK1	Q01649	594 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	YVH1	Q02256	364 aa	Known RBP	5.76	□□□□□ -1.49
CDS1	YBR029C	ARP10	Q04549	284 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	MCP2	Q06567	569 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	YDL057W	Q07379	328 aa		5.76	□□□□□ -1.49
CDS1	YBR029C	YMR085W	P0CF18	432 aa		5.75	□□□□□ -1.49
CDS1	YBR029C	SNF3	P10870	884 aa		5.75	□□□□□ -1.49
CDS1	YBR029C	LRP1	P38801	184 aa	Known RBP	5.75	□□□□□ -1.49
CDS1	YBR029C	VPS41	P38959	992 aa		5.75	□□□□□ -1.49
CDS1	YBR029C	LTP1	P40347	161 aa		5.75	□□□□□ -1.49
CDS1	YBR029C	EAF7	P53911	425 aa	Known RBP	5.75	□□□□□ -1.49
CDS1	YBR029C	VPS9	P54787	451 aa		5.75	□□□□□ -1.49
CDS1	YBR029C	FRE7	Q12333	620 aa		5.75	□□□□□ -1.49
CDS1	YBR029C	AFI1	Q99222	893 aa		5.75	□□□□□ -1.49
CDS1	YBR029C	TAF2	P23255	1407 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	CLB1	P24868	471 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	TFB1	P32776	642 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	MTR2	P34232	184 aa	Known RBP	5.74	□□□□□ -1.49
CDS1	YBR029C	UBA4	P38820	440 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	YIL060W	P40519	144 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	ALK1	P43633	760 aa	Known RBP	5.74	□□□□□ -1.49
CDS1	YBR029C	BNI5	P53890	448 aa	Known RBP	5.74	□□□□□ -1.49
CDS1	YBR029C	RPA49	Q01080	415 aa	Predicted RBP	5.74	□□□□□ -1.49
CDS1	YBR029C	MSC1	Q03104	513 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	RSC9	Q03124	581 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	ROY1	Q04847	553 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	COQ9	Q05779	260 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	ADE13	Q05911	482 aa	Known RBP	5.74	□□□□□ -1.49
CDS1	YBR029C	POS5	Q06892	414 aa		5.74	□□□□□ -1.49
CDS1	YBR029C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
CDS1	YBR029C	PGK1	P00560	416 aa	Known RBP	5.73	□□□□□ -1.49
CDS1	YBR029C	HSP82	P02829	709 aa	Known RBP	5.73	□□□□□ -1.49
CDS1	YBR029C	RPL31B	P0C2H9	113 aa	Known RBP	5.73	□□□□□ -1.49
CDS1	YBR029C	YKL023W	P36103	277 aa	Known RBP	5.73	□□□□□ -1.49
CDS1	YBR029C	SCO2	P38072	301 aa		5.73	□□□□□ -1.49
CDS1	YBR029C	ZIM17	P42844	174 aa		5.73	□□□□□ -1.49
CDS1	YBR029C	SNG1	P46950	547 aa		5.73	□□□□□ -1.49
CDS1	YBR029C	AIM32	Q04689	311 aa		5.73	□□□□□ -1.49
CDS1	YBR029C	YLR345W	Q06137	509 aa		5.73	□□□□□ -1.49
CDS1	YBR029C	RDR1	Q08904	546 aa		5.73	□□□□□ -1.49
CDS1	YBR029C	GAL4	P04386	881 aa		5.72	□□□□□ -1.49
CDS1	YBR029C	PEX2	P32800	271 aa		5.72	□□□□□ -1.49
CDS1	YBR029C	PYK2	P52489	506 aa	Known RBP	5.72	□□□□□ -1.49
CDS1	YBR029C	COP1	P53622	1201 aa	Known RBP	5.72	□□□□□ -1.49
CDS1	YBR029C	VTC3	Q02725	835 aa		5.72	□□□□□ -1.49
CDS1	YBR029C	KAP120	Q02932	1032 aa		5.72	□□□□□ -1.49
CDS1	YBR029C	YMR160W	Q03823	816 aa		5.72	□□□□□ -1.49
CDS1	YBR029C	ARX1	Q03862	593 aa	Known RBP	5.72	□□□□□ -1.49
CDS1	YBR029C	YDL218W	Q07629	317 aa		5.72	□□□□□ -1.49
CDS1	YBR029C	MBR1	P23493	339 aa		5.71	□□□□□ -1.5
CDS1	YBR029C	HXT3	P32466	567 aa	Known RBP	5.71	□□□□□ -1.5
CDS1	YBR029C	SHP1	P34223	423 aa		5.71	□□□□□ -1.5
CDS1	YBR029C	JEM1	P40358	645 aa		5.71	□□□□□ -1.5
CDS1	YBR029C	SMM1	P53720	384 aa	Known RBP	5.71	□□□□□ -1.5
CDS1	YBR029C	YNL234W	P53857	426 aa		5.71	□□□□□ -1.5
CDS1	YBR029C	CTL1	Q03220	320 aa	Known RBP	5.71	□□□□□ -1.5
CDS1	YBR029C	RBS1	Q05672	457 aa	Known RBP	5.71	□□□□□ -1.5
CDS1	YBR029C	PRP2	P20095	876 aa	Predicted RBP	5.7	□□□□□ -1.5
CDS1	YBR029C	PPH22	P23595	377 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	BUD14	P27637	709 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	ARP1	P38696	384 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	CFD1	P40558	293 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	HXT9	P40885	567 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	YPT11	P48559	417 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	SHR3	Q02774	210 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	DON1	Q05610	365 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	THP1	Q08231	455 aa		5.7	□□□□□ -1.5
CDS1	YBR029C	BRR1	Q99177	341 aa	Predicted RBP	5.7	□□□□□ -1.5
CDS1	YBR029C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
CDS1	YBR029C	SRV2	P17555	526 aa	Known RBP	5.69	□□□□□ -1.5
CDS1	YBR029C	OPI1	P21957	404 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	MNE1	P24720	663 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	ELO2	P25358	347 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	URA7	P28274	579 aa	Known RBP	5.69	□□□□□ -1.5
CDS1	YBR029C	RAD14	P28519	371 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	TUL1	P36096	758 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	NTC20	P38302	140 aa	Predicted RBP	5.69	□□□□□ -1.5
CDS1	YBR029C	TOM71	P38825	639 aa	Known RBP	5.69	□□□□□ -1.5
CDS1	YBR029C	MBB1	P39534	108 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	ULP2	P40537	1034 aa	Predicted RBP	5.69	□□□□□ -1.5
CDS1	YBR029C	YIL024C	P40543	189 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	CAC2	Q04199	468 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	SEG1	Q04279	960 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	GYL1	Q04322	720 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	CRC1	Q12289	327 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	EDE1	P34216	1381 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	RAV1	P47104	1357 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	BNI1	P41832	1953 aa		5.69	□□□□□ -1.5
CDS1	YBR029C	COR1	P07256	457 aa		5.68	□□□□□ -1.5
CDS1	YBR029C	PEP5	P12868	1029 aa		5.68	□□□□□ -1.5
CDS1	YBR029C	YAP1	P19880	650 aa	Known RBP	5.68	□□□□□ -1.5
CDS1	YBR029C	SPB1	P25582	841 aa	Predicted RBP	5.68	□□□□□ -1.5
CDS1	YBR029C	AFG1	P32317	509 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms